Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8512 Papaver somniferum HOM05D005689 ORTHO05D007060 8.8e-78 293.5 144 100.0
PSO541G0653 Papaver somniferum HOM05D005689 ORTHO05D007060 2.0e-77 292.4 144 99.3
Aqoxy6G02106 Aquilegia oxysepala HOM05D005689 ORTHO05D007060 4.2e-72 274.6 144 93.1
Dinv41928 Davidia involucrata HOM05D005689 ORTHO05D007060 2.1e-71 272.3 142 93.0
Migut.B00070 Erythranthe guttata HOM05D005689 ORTHO05D007060 2.1e-71 272.3 142 92.3
MSTRG.19983 Avicennia marina HOM05D005689 ORTHO05D007060 2.7e-71 271.9 142 91.5
Cfa005260 Carpinus fangiana HOM05D005689 ORTHO05D007060 2.7e-71 271.9 142 92.3
GSVIVG01024004001 Vitis vinifera HOM05D005689 ORTHO05D007060 2.7e-71 271.9 142 92.3
QL11p051049 Quercus lobata HOM05D005689 ORTHO05D007060 4.7e-71 271.2 142 92.3
Glyma.09G245600 Glycine max HOM05D005689 ORTHO05D007060 6.1e-71 270.8 142 91.5
CANSAT25G1424 Cannabis sativa HOM05D005689 ORTHO05D007060 8.0e-71 270.4 144 91.0
Duzib132G1056 Durio zibethinus HOM05D005689 ORTHO05D007060 8.0e-71 270.4 142 91.5
Glyma.18G247400 Glycine max HOM05D005689 ORTHO05D007060 8.0e-71 270.4 142 91.5
Hund06443 Selenicereus undatus HOM05D005689 ORTHO05D007060 8.0e-71 270.4 142 90.8
Eucgr.I01435 Eucalyptus grandis HOM05D005689 ORTHO05D007060 1.0e-70 270.0 142 90.1
PGR142G2796 Punica granatum HOM05D005689 ORTHO05D007060 1.0e-70 270.0 142 90.1
CiPaw.05G083600 Carya illinoinensis HOM05D005689 ORTHO05D007060 1.4e-70 269.6 142 91.5
Ciclev10029529m.g Citrus clementina HOM05D005689 ORTHO05D007060 1.4e-70 269.6 142 90.8
Gohir.A03G205500 Gossypium hirsutum HOM05D005689 ORTHO05D007060 1.4e-70 269.6 144 90.3
Gorai.005G254700 Gossypium raimondii HOM05D005689 ORTHO05D007060 1.4e-70 269.6 144 90.3
TPR.G32114 Trifolium pratense HOM05D005689 ORTHO05D007060 1.4e-70 269.6 144 90.3
unitig_0.g36 Utricularia gibba HOM05D005689 ORTHO05D007060 1.4e-70 269.6 144 89.6
Actinidia20518 Actinidia chinensis HOM05D005689 ORTHO05D007060 1.8e-70 269.2 142 91.5
Potri.009G136800 Populus trichocarpa HOM05D005689 ORTHO05D007060 1.8e-70 269.2 142 91.5
Prupe.8G167200 Prunus persica HOM05D005689 ORTHO05D007060 1.8e-70 269.2 141 90.1
Atru.chr5.3380 Acer truncatum HOM05D005689 ORTHO05D007060 3.0e-70 268.5 142 90.8
EL10Ac9g21356 Beta vulgaris HOM05D005689 ORTHO05D007060 3.0e-70 268.5 142 90.8
CSS0016500 Camellia sinensis var. sinensis HOM05D005689 ORTHO05D007060 3.0e-70 268.5 141 91.5
Gohir.D02G226800 Gossypium hirsutum HOM05D005689 ORTHO05D007060 3.0e-70 268.5 144 89.6
Hma1.2p1_0032F.1_g019300 Hydrangea macrophylla HOM05D005689 ORTHO05D007060 3.0e-70 268.5 142 90.8
Medtr7g081040 Medicago truncatula HOM05D005689 ORTHO05D007060 3.0e-70 268.5 144 89.6
Ca_08042_v3 Cicer arietinum L. HOM05D005689 ORTHO05D007060 4.0e-70 268.1 144 89.6
Duzib248G0128 Durio zibethinus HOM05D005689 ORTHO05D007060 4.0e-70 268.1 142 90.8
Lj1g0014054 Lotus japonicus HOM05D005689 ORTHO05D007060 4.0e-70 268.1 142 90.1
MD05G1123300 Malus domestica HOM05D005689 ORTHO05D007060 4.0e-70 268.1 141 89.4
TWI31G0315 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 4.0e-70 268.1 141 91.5
vmacro02282 Vaccinium macrocarpon HOM05D005689 ORTHO05D007060 4.0e-70 268.1 142 90.8
AUR62013016 Chenopodium quinoa HOM05D005689 ORTHO05D007060 5.2e-70 267.7 142 90.1
Lalb_Chr21g0306961 Lupinus albus HOM05D005689 ORTHO05D007060 5.2e-70 267.7 142 89.4
Peaxi162Scf00362g00537 Petunia axillaris HOM05D005689 ORTHO05D007060 8.8e-70 266.9 142 90.1
Sc18g0006380 Simmondsia chinensis HOM05D005689 ORTHO05D007060 8.8e-70 266.9 142 88.7
Manes.04G071800 Manihot esculenta HOM05D005689 ORTHO05D007060 1.2e-69 266.5 142 89.4
VMungo1383G2472 Vigna mungo HOM05D005689 ORTHO05D007060 1.2e-69 266.5 142 89.4
Phvul.008G049900 Phaseolus vulgaris HOM05D005689 ORTHO05D007060 1.5e-69 266.2 142 89.4
PGSC0003DMG400006181 Solanum tuberosum HOM05D005689 ORTHO05D007060 1.5e-69 266.2 141 90.8
TAR376G1105 Trochodendron aralioides HOM05D005689 ORTHO05D007060 1.5e-69 266.2 144 91.0
Actinidia00628 Actinidia chinensis HOM05D005689 ORTHO05D007060 2.0e-69 265.8 142 90.1
CiPaw.06G120900 Carya illinoinensis HOM05D005689 ORTHO05D007060 2.0e-69 265.8 142 90.1
AUR62010026 Chenopodium quinoa HOM05D005689 ORTHO05D007060 2.0e-69 265.8 142 90.1
Cc09_g09830 Coffea canephora HOM05D005689 ORTHO05D007060 2.0e-69 265.8 138 91.3
Nitab4.5_0003698g0100 Nicotiana tabacum HOM05D005689 ORTHO05D007060 2.0e-69 265.8 142 90.1
Thecc.02G057800 Theobroma cacao HOM05D005689 ORTHO05D007060 2.6e-69 265.4 141 90.1
FAN24G0830 Fragaria x ananassa HOM05D005689 ORTHO05D007060 4.4e-69 264.6 141 87.2
MD10G1126300 Malus domestica HOM05D005689 ORTHO05D007060 4.4e-69 264.6 141 87.9
RcHm_v2.0_Chr6g0278501 Rosa chinensis HOM05D005689 ORTHO05D007060 4.4e-69 264.6 141 87.9
CAN.G588.89 Capsicum annuum HOM05D005689 ORTHO05D007060 5.7e-69 264.2 142 89.4
Cpa.g.sc20.100 Carica papaya HOM05D005689 ORTHO05D007060 5.7e-69 264.2 142 89.4
ClCG02G003990 Citrullus lanatus HOM05D005689 ORTHO05D007060 5.7e-69 264.2 144 87.5
MELO3C013345.2 Cucumis melo HOM05D005689 ORTHO05D007060 5.7e-69 264.2 144 87.5
CsaV3_7G001110 Cucumis sativus L. HOM05D005689 ORTHO05D007060 5.7e-69 264.2 144 87.5
Sed0024195 Sechium edule HOM05D005689 ORTHO05D007060 5.7e-69 264.2 144 87.5
Solyc01g111690.3 Solanum lycopersicum HOM05D005689 ORTHO05D007060 5.7e-69 264.2 141 90.1
Sopen01g053730 Solanum pennellii HOM05D005689 ORTHO05D007060 5.7e-69 264.2 141 90.1
FvH4_2g15500 Fragaria vesca HOM05D005689 ORTHO05D007060 7.5e-69 263.8 141 87.2
FAN15G3340 Fragaria x ananassa HOM05D005689 ORTHO05D007060 7.5e-69 263.8 141 87.2
Lsat_1_v5_gn_8_123161 Lactuca sativa HOM05D005689 ORTHO05D007060 7.5e-69 263.8 142 88.0
TWI75G0361 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 7.5e-69 263.8 141 90.1
FAN27G1498 Fragaria x ananassa HOM05D005689 ORTHO05D007060 1.7e-68 262.7 141 86.5
MBI12_g17551_MAGBIO Magnolia biondii HOM05D005689 ORTHO05D007060 1.7e-68 262.7 144 88.2
ECA233G5373 Erigeron canadensis HOM05D005689 ORTHO05D007060 2.8e-68 261.9 136 91.2
FAN20G0310 Fragaria x ananassa HOM05D005689 ORTHO05D007060 3.7e-68 261.5 141 86.5
HanXRQChr03g0080211 Helianthus annuus HOM05D005689 ORTHO05D007060 8.3e-68 260.4 136 90.4
Nitab4.5_0000283g0450 Nicotiana tabacum HOM05D005689 ORTHO05D007060 1.6e-66 256.1 152 84.2
Os09g0541500 Oryza sativa ssp. japonica HOM05D005689 ORTHO05D007060 1.6e-66 256.1 144 85.4
Zm00001eb331790 Zea mays HOM05D005689 ORTHO05D007060 3.5e-66 255.0 142 85.9
SalBow1G8746 Salvia bowleyana HOM05D005689 ORTHO05D007060 7.7e-66 253.8 140 87.1
DCAR_030423 Daucus carota HOM05D005689 ORTHO05D007060 1.3e-65 253.1 142 85.9
Psat3g100360 Pisum sativum HOM05D005689 ORTHO05D007060 1.7e-65 252.7 130 92.3
Oeu019918.2 Olea europaea HOM05D005689 ORTHO05D007060 3.8e-65 251.5 168 75.6
CDE02G0259 Ceratophyllum demersum HOM05D005689 ORTHO05D007060 5.0e-65 251.1 138 87.0
SalBow5G2226 Salvia bowleyana HOM05D005689 ORTHO05D007060 5.0e-65 251.1 165 77.0
AL4G10060 Arabidopsis lyrata HOM05D005689 ORTHO05D007060 6.5e-65 250.8 139 86.3
DCAR_003179 Daucus carota HOM05D005689 ORTHO05D007060 6.5e-65 250.8 138 86.2
SEGI_29883 Sequoiadendron giganteum HOM05D005689 ORTHO05D007060 6.5e-65 250.8 144 83.3
THA.LOC104824758 Tarenaya hassleriana HOM05D005689 ORTHO05D007060 8.6e-65 250.4 139 87.1
Sp4g00120 Schrenkiella parvula HOM05D005689 ORTHO05D007060 1.1e-64 250.0 139 84.9
AT2G20930 Arabidopsis thaliana HOM05D005689 ORTHO05D007060 1.5e-64 249.6 139 85.6
BcaB08g34950 Brassica carinata HOM05D005689 ORTHO05D007060 1.5e-64 249.6 139 84.9
BcaC07g41181 Brassica carinata HOM05D005689 ORTHO05D007060 1.5e-64 249.6 139 84.9
Thhalv10026520m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 2.5e-64 248.8 137 86.1
Carub.0004s0002 Capsella rubella HOM05D005689 ORTHO05D007060 3.3e-64 248.4 139 84.9
CARHR174210 Cardamine hirsuta HOM05D005689 ORTHO05D007060 4.2e-64 248.1 139 85.6
HPP92_012947 Vanilla planifolia HOM05D005689 ORTHO05D007060 3.6e-63 245.0 144 81.2
BcaNung01978 Brassica carinata HOM05D005689 ORTHO05D007060 8.0e-63 243.8 137 83.9
Aa31LG6G16620 Aethionema arabicum HOM05D005689 ORTHO05D007060 1.4e-62 243.0 137 83.9
Thhalv10000369m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 2.3e-62 242.3 139 83.5
Mapoly0010s0009 Marchantia polymorpha HOM05D005689 ORTHO05D007060 3.0e-62 241.9 140 81.4
arahy.Tifrunner.gnm1.ann1.9U6RFS Arachis hypogaea HOM05D005689 ORTHO05D007060 5.2e-62 241.1 205 63.4
A06p48990 Brassica napus HOM05D005689 ORTHO05D007060 5.2e-62 241.1 137 83.2
BraA06t27765Z Brassica rapa HOM05D005689 ORTHO05D007060 5.2e-62 241.1 137 83.2
C07p63680 Brassica napus HOM05D005689 ORTHO05D007060 6.8e-62 240.7 137 82.5
BolC7t46781H Brassica oleracea HOM05D005689 ORTHO05D007060 6.8e-62 240.7 137 82.5
A09p58620 Brassica napus HOM05D005689 ORTHO05D007060 8.9e-62 240.4 139 83.5
C08p41910 Brassica napus HOM05D005689 ORTHO05D007060 8.9e-62 240.4 139 83.5
BolC8t51754H Brassica oleracea HOM05D005689 ORTHO05D007060 8.9e-62 240.4 139 83.5
BraA09t41249Z Brassica rapa HOM05D005689 ORTHO05D007060 8.9e-62 240.4 139 83.5
Sabra09G0106300 Salix brachista HOM05D005689 ORTHO05D007060 2.0e-61 239.2 206 62.6
Sp7g37220 Schrenkiella parvula HOM05D005689 ORTHO05D007060 5.7e-61 237.7 137 83.9
Aa31LG7G15690 Aethionema arabicum HOM05D005689 ORTHO05D007060 2.8e-60 235.3 167 71.9
SalBow5G0288 Salvia bowleyana HOM05D005689 ORTHO05D007060 7.0e-59 230.7 154 76.0
ATR0315G041 Amborella trichopoda HOM05D005689 ORTHO05D007060 2.0e-58 229.2 129 84.5
Pp3c13_19460 Physcomitrium patens HOM05D005689 ORTHO05D007060 2.0e-58 229.2 144 74.3
Sed0010745 Sechium edule HOM05D005689 ORTHO05D007060 4.5e-58 228.0 144 77.8
Pp3c12_10830 Physcomitrium patens HOM05D005689 ORTHO05D007060 7.3e-56 220.7 144 71.5
BcaC07g41184 Brassica carinata HOM05D005689 ORTHO05D007060 2.1e-55 219.2 139 76.3
SMO228G0084 Selaginella moellendorffii HOM05D005689 ORTHO05D007060 2.0e-50 202.6 138 64.5
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 7.8e-50 200.7 136 67.6
HPP92_007243 Vanilla planifolia HOM05D005689 ORTHO05D007060 3.9e-49 198.4 122 77.0
CARHR111830 Cardamine hirsuta HOM05D005689 ORTHO05D007060 1.1e-48 196.8 113 83.2
SGA_v2.0_scaffold80G25838 Striga asiatica HOM05D005689 ORTHO05D007060 1.6e-47 193.0 160 63.1
Nn6g31939 Nelumbo nucifera HOM05D005689 ORTHO05D007060 8.0e-47 190.7 97 93.8
arahy.Tifrunner.gnm1.ann1.B1HGXN Arachis hypogaea HOM05D005689 ORTHO05D007060 3.1e-46 188.7 99 89.9
Nitab4.5_0000079g0270 Nicotiana tabacum HOM05D005689 ORTHO05D007060 5.2e-46 188.0 100 88.0
Potri.004G176500 Populus trichocarpa HOM05D005689 ORTHO05D007060 6.0e-42 174.5 120 74.2
Rhsim11G0192800 Rhododendron simsii HOM05D005689 ORTHO05D007060 2.0e-29 132.9 72 90.3
Cre03.g165650 Chlamydomonas reinhardtii HOM05D005689 ORTHO05D007060 9.9e-29 130.6 145 48.3
AUR62017814 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.9e-27 126.3 71 85.9
AUR62003497 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.6e-26 123.2 71 83.1
Oeu028973.1 Olea europaea HOM05D005689 ORTHO05D007060 7.8e-26 120.9 72 80.6
RcHm_v2.0_Chr4g0392001 Rosa chinensis HOM05D005689 ORTHO05D007060 6.6e-25 117.9 140 47.9
Ah.01g023120 Amaranthus hybridus HOM05D005689 ORTHO05D007060 5.1e-17 91.7 43 95.3
Cfa022471 Carpinus fangiana HOM05D000441 ORTHO05D124224 1.3e-12 77.0 167 32.9
PRCOL_00005825 Prasinoderma coloniale HOM05D005689 ORTHO05D007060 2.2e-12 76.3 117 37.6
MCO02G011 Micromonas commoda HOM05D005689 ORTHO05D007060 1.1e-11 73.9 157 30.6
HanXRQChr05g0150591 Helianthus annuus HOM05D005689 ORTHO05D007060 1.6e-10 70.1 44 72.7
SGA_v2.0_scaffold199G41205 Striga asiatica HOM05D005689 ORTHO05D007060 2.1e-10 69.7 53 64.2
Cre13.g571600 Chlamydomonas reinhardtii HOM05D004554 ORTHO05D005360 2.1e-07 59.7 133 29.3
SGA_v2.0_scaffold11G05770 Striga asiatica HOM05D005689 ORTHO05D004382 2.1e-07 59.7 36 72.2


User provided reference genes

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