Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 1.1e-190 669.8 346 100.0
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 4.4e-184 647.9 346 96.0
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 2.5e-126 456.1 347 66.6
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 2.2e-122 443.0 313 73.5
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 6.3e-122 441.4 315 72.1
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 8.2e-122 441.0 314 70.7
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.4e-120 435.6 314 72.3
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 4.5e-120 435.3 311 72.3
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 5.9e-120 434.9 312 72.1
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.4e-118 430.3 326 69.3
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.2e-118 429.1 314 71.7
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.2e-118 428.7 313 71.6
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.6e-117 426.8 316 70.6
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 3.6e-117 425.6 331 66.5
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 1.0e-116 424.1 301 73.8
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.0e-116 424.1 316 69.0
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 1.8e-116 423.3 310 70.3
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 2.3e-116 422.9 326 66.0
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 2.3e-116 422.9 301 72.1
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 3.9e-116 422.2 304 71.7
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 3.9e-116 422.2 329 67.8
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 3.9e-116 422.2 277 75.5
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 5.2e-116 421.8 315 68.3
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 8.8e-116 421.0 321 67.3
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 8.8e-116 421.0 322 68.9
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 8.8e-116 421.0 314 71.0
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 8.8e-116 421.0 315 70.2
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 2.6e-115 419.5 322 67.4
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 3.3e-115 419.1 333 68.5
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 5.7e-115 418.3 311 70.4
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 7.4e-115 417.9 315 68.6
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 9.7e-115 417.5 332 66.9
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 9.7e-115 417.5 315 68.6
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.3e-114 417.2 367 61.9
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 1.7e-114 416.8 308 69.5
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 1.7e-114 416.8 315 69.2
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 2.8e-114 416.0 321 67.0
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 2.8e-114 416.0 329 67.8
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 6.3e-114 414.8 327 64.5
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 6.3e-114 414.8 310 69.0
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 8.2e-114 414.5 313 68.1
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 8.2e-114 414.5 327 66.7
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 1.1e-113 414.1 277 74.0
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.1e-113 414.1 333 67.6
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 1.1e-113 414.1 315 67.9
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.4e-113 413.7 329 66.0
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 1.4e-113 413.7 319 68.3
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 2.4e-113 412.9 333 66.1
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 5.3e-113 411.8 313 67.7
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 5.3e-113 411.8 345 62.3
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 9.1e-113 411.0 269 73.6
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 9.1e-113 411.0 305 68.9
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 1.2e-112 410.6 322 66.5
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.2e-112 410.6 305 69.5
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.6e-112 410.2 316 66.5
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 4.5e-112 408.7 342 64.0
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 4.5e-112 408.7 317 68.8
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 5.9e-112 408.3 309 65.7
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 5.9e-112 408.3 265 75.8
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 5.9e-112 408.3 265 75.8
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 5.9e-112 408.3 250 78.4
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 1.0e-111 407.5 312 68.3
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 1.0e-111 407.5 303 69.0
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.3e-111 407.1 317 67.8
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 1.3e-111 407.1 333 65.5
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 1.7e-111 406.8 307 68.7
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.9e-111 406.0 333 65.2
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 2.9e-111 406.0 316 66.1
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 5.0e-111 405.2 301 67.4
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 1.1e-110 404.1 271 73.8
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 1.1e-110 404.1 322 65.2
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.5e-110 402.9 250 77.2
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 3.2e-110 402.5 317 65.0
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 5.5e-110 401.7 271 75.3
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 1.2e-109 400.6 289 69.9
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.7e-109 398.7 250 76.4
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 8.0e-109 397.9 252 75.0
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.0e-108 397.5 300 68.7
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.4e-108 397.1 326 64.4
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 4.0e-108 395.6 323 64.7
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.2e-107 394.0 257 73.9
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 7.5e-107 391.3 297 69.0
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 1.7e-106 390.2 330 61.5
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 2.2e-106 389.8 250 75.6
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 1.4e-105 387.1 257 73.5
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 2.0e-104 383.3 314 63.4
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 4.5e-104 382.1 291 66.3
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 4.5e-104 382.1 291 66.3
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 4.5e-104 382.1 296 65.2
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 1.3e-103 380.6 307 63.5
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 1.7e-103 380.2 313 63.3
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 2.2e-103 379.8 310 62.9
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 5.0e-103 378.6 322 61.5
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 3.2e-102 375.9 282 66.7
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 4.2e-102 375.6 323 61.3
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.6e-101 373.6 250 72.4
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 1.0e-100 370.9 323 61.0
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 1.8e-100 370.2 273 67.0
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 8.8e-100 367.9 323 59.8
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 3.4e-99 365.9 275 66.9
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 5.9e-96 355.1 407 49.4
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 1.7e-95 353.6 238 72.7
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 8.6e-95 351.3 304 62.8
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 1.9e-94 350.1 279 65.9
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 3.3e-94 349.4 331 56.8
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 9.5e-94 347.8 296 63.9
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.3e-87 327.4 344 56.4
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 5.0e-87 325.5 277 58.1
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 8.0e-85 318.2 303 56.1
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 6.0e-80 302.0 283 54.1
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 6.2e-77 292.0 231 65.4
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 1.2e-75 287.7 304 56.6
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 1.6e-72 277.3 325 52.3
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 4.0e-60 236.1 217 58.1
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.9e-58 229.2 180 67.2
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 6.0e-56 222.2 183 64.5
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 3.9e-55 219.5 150 69.3
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.6e-53 213.0 128 82.0
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.6e-53 213.0 128 82.0
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 3.6e-53 213.0 238 45.0
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 4.7e-53 212.6 198 60.6
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 1.1e-52 211.5 259 44.0
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 4.0e-52 209.5 236 46.6
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 5.4e-49 199.1 139 69.1
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 3.5e-48 196.4 125 74.4
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 1.7e-47 194.1 256 40.2
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 1.1e-46 191.4 225 43.1
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.1e-46 191.4 170 60.0
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 9.6e-46 188.3 109 82.6
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 1.6e-37 161.0 247 37.2
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 2.4e-36 157.1 236 36.0
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 3.2e-33 146.7 98 74.5
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 4.2e-33 146.4 91 80.2
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 2.0e-27 127.5 215 32.6
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-26 124.8 117 58.1
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 4.2e-25 119.8 101 63.4
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.2e-24 118.2 92 68.5
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 3.9e-23 113.2 65 81.5
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.5e-22 111.3 65 80.0
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 3.3e-22 110.2 65 80.0
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 1.4e-17 94.7 78 64.1
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 4.2e-17 93.2 73 63.0
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 5.5e-17 92.8 96 55.2
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 5.5e-17 92.8 96 55.2
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 1.4e-15 88.2 176 34.1
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 4.3e-14 83.2 50 76.0
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 5.7e-14 82.8 77 58.4
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 3.7e-13 80.1 52 73.1
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 1.1e-12 78.6 60 63.3
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 7.7e-11 72.4 47 72.3
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.3e-10 71.6 46 71.7
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 7.2e-09 65.9 157 33.8
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 8.8e-07 58.9 92 46.7


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