Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 3.1e-254 881.3 456 100.0
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 3.1e-225 785.0 505 84.8
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.6e-88 330.9 445 47.0
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 6.9e-76 288.9 465 45.2
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 1.9e-70 270.8 467 40.7
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 3.7e-69 266.5 453 43.3
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 1.2e-64 251.5 455 40.9
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 1.3e-63 248.1 436 43.1
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 3.9e-63 246.5 277 50.2
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 5.1e-63 246.1 456 40.6
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 6.7e-63 245.7 446 40.6
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 1.1e-62 245.0 440 40.9
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 2.5e-62 243.8 397 41.6
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 4.8e-61 239.6 408 40.9
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.6e-59 233.8 321 47.0
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.7e-58 231.1 411 39.9
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 1.1e-57 228.4 449 37.6
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 3.2e-57 226.9 447 38.7
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.1e-54 218.4 404 38.1
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 3.3e-54 216.9 448 37.1
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 5.7e-54 216.1 411 38.4
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 3.7e-53 213.4 455 36.7
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 4.8e-53 213.0 458 36.9
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 6.3e-53 212.6 405 39.5
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 9.0e-52 208.8 466 36.1
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 9.0e-52 208.8 440 37.5
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.2e-51 208.4 433 36.3
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.2e-51 208.4 375 40.5
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 3.4e-51 206.8 451 37.5
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 1.0e-50 205.3 463 36.1
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 8.5e-50 202.2 461 35.8
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 2.5e-49 200.7 409 39.6
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 4.2e-49 199.9 433 36.7
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 5.5e-49 199.5 446 35.0
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 1.2e-48 198.4 464 36.4
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 2.7e-48 197.2 465 32.9
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 6.1e-48 196.1 444 37.4
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 6.7e-47 192.6 444 32.9
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 8.8e-47 192.2 459 34.4
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 1.1e-46 191.8 458 34.5
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 1.5e-46 191.4 416 36.3
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 2.0e-46 191.0 491 34.0
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 4.3e-46 189.9 369 39.3
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 1.3e-45 188.3 401 37.2
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 1.7e-45 188.0 508 34.1
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-45 188.0 527 29.8
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 2.2e-45 187.6 446 35.4
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 2.2e-45 187.6 453 32.0
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 2.8e-45 187.2 453 35.3
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 3.7e-45 186.8 467 34.0
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 5.3e-44 183.0 511 32.7
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 2.6e-43 180.6 509 32.2
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 3.4e-43 180.3 467 33.0
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 5.9e-43 179.5 468 33.5
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 2.2e-42 177.6 487 32.6
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 5.0e-42 176.4 379 36.4
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 6.5e-42 176.0 353 36.3
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 1.4e-41 174.9 388 36.3
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 2.5e-41 174.1 454 34.8
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 3.2e-41 173.7 439 35.3
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 2.7e-40 170.6 569 31.6
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.0e-39 168.7 408 34.6
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.0e-39 168.7 426 33.3
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 1.0e-39 168.7 450 31.3
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 6.7e-39 166.0 479 32.4
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.5e-38 164.9 434 34.1
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 3.3e-38 163.7 441 32.9
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 2.2e-37 161.0 411 33.8
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 4.8e-37 159.8 445 32.8
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 2.4e-36 157.5 414 36.2
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 1.9e-33 147.9 212 41.0
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 4.2e-33 146.7 431 32.9
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 5.5e-33 146.4 436 31.4
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 1.0e-31 142.1 378 32.3
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 1.8e-31 141.4 447 29.5
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 2.3e-31 141.0 440 32.3
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 1.1e-30 138.7 443 29.1
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 1.4e-28 131.7 445 30.1
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 7.0e-28 129.4 411 32.1
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 2.6e-27 127.5 442 29.0
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 3.5e-27 127.1 452 30.1
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 5.9e-27 126.3 451 29.5
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 5.9e-27 126.3 254 38.6
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 7.7e-27 125.9 440 29.3
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 1.3e-26 125.2 415 31.6
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.2e-26 124.4 365 31.5
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 3.8e-26 123.6 533 26.6
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 3.8e-26 123.6 383 30.3
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 1.9e-25 121.3 437 27.2
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 4.2e-25 120.2 407 31.9
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 5.5e-25 119.8 449 27.8
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 2.1e-24 117.9 283 34.6
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 4.7e-24 116.7 448 27.2
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.0e-23 115.5 145 47.6
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 5.2e-23 113.2 477 29.8
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 6.7e-23 112.8 179 44.1
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 1.5e-22 111.7 396 31.1
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 2.0e-22 111.3 459 28.8
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 7.5e-22 109.4 413 27.4
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 1.6e-19 101.7 442 27.8
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 4.5e-19 100.1 323 32.2
Zm00001eb225260 Zea mays HOM05D005864 ORTHO05D006770 4.5e-19 100.1 142 42.3
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 5.9e-19 99.8 409 30.1
TAR626G0200 Trochodendron aralioides HOM05D005864 ORTHO05D006770 7.7e-19 99.4 158 44.9
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 5.5e-17 93.2 299 30.4
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 9.4e-17 92.4 92 56.5
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 1.6e-16 91.7 502 25.5
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 6.1e-16 89.7 456 25.7
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 4.0e-15 87.0 219 34.7
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.6e-14 84.3 96 50.0
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 9.8e-14 82.4 455 24.4
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 1.7e-13 81.6 400 27.5
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 4.5e-11 73.6 239 29.3
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 1.0e-10 72.4 414 26.1
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 3.0e-07 60.8 46 58.7
Pp3c7_5470 Physcomitrium patens HOM05D005864 ORTHO05D006770 5.2e-07 60.1 259 25.9
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 1.5e-06 58.5 355 24.5
Lsat_1_v5_gn_9_59080 Lactuca sativa HOM05D005864 ORTHO05D006770 4.4e-06 57.0 110 35.5
SMO356G0193 Selaginella moellendorffii HOM05D005864 ORTHO05D006770 7.5e-06 56.2 239 27.6
CBR_g11242 Chara braunii HOM05D005864 ORTHO05D006770 9.8e-06 55.8 65 50.8


User provided reference genes

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