Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8316 Papaver somniferum HOM05D007205 ORTHO05D009175 1.2e-200 703.0 362 100.0
PSO017G6138 Papaver somniferum HOM05D007205 ORTHO05D009175 5.8e-187 657.5 360 94.2
TAR626G1876 Trochodendron aralioides HOM05D007205 ORTHO05D009175 1.0e-82 311.2 365 52.9
Nn5g28818 Nelumbo nucifera HOM05D007205 ORTHO05D009175 4.5e-78 295.8 366 50.3
Hma1.2p1_0712F.1_g207580 Hydrangea macrophylla HOM05D007205 ORTHO05D009175 6.0e-75 285.4 361 48.8
Atru.chr6.3107 Acer truncatum HOM05D007205 ORTHO05D009175 5.6e-73 278.9 354 49.2
Aqoxy2G00583 Aquilegia oxysepala HOM05D007205 ORTHO05D009175 1.4e-71 274.2 372 46.8
Manes.12G078600 Manihot esculenta HOM05D007205 ORTHO05D009175 6.5e-69 265.4 362 47.0
Haze_12995 Corylus avellana HOM05D007205 ORTHO05D009175 8.4e-69 265.0 358 45.5
Sabra13G0122300 Salix brachista HOM05D007205 ORTHO05D009175 1.9e-68 263.8 360 46.4
TWI75G1301 Tripterygium wilfordii HOM05D007205 ORTHO05D009175 4.6e-67 259.2 356 45.8
Gorai.005G208100 Gossypium raimondii HOM05D007205 ORTHO05D009175 5.1e-66 255.8 360 45.6
Dinv18560 Davidia involucrata HOM05D007205 ORTHO05D009175 6.7e-66 255.4 357 44.8
Gohir.D02G185500 Gossypium hirsutum HOM05D007205 ORTHO05D009175 1.5e-65 254.2 360 45.6
Potri.013G152200 Populus trichocarpa HOM05D007205 ORTHO05D009175 3.3e-65 253.1 360 45.3
Ciclev10018085m.g Citrus clementina HOM05D007205 ORTHO05D009175 4.3e-65 252.7 356 47.8
Cfa014480 Carpinus fangiana HOM05D007205 ORTHO05D009175 5.7e-65 252.3 352 43.8
MD09G1127600 Malus domestica HOM05D007205 ORTHO05D009175 1.3e-64 251.1 365 45.8
Gohir.A03G162500 Gossypium hirsutum HOM05D007205 ORTHO05D009175 3.7e-64 249.6 360 44.7
CANSAT64G0219 Cannabis sativa HOM05D007205 ORTHO05D009175 6.3e-64 248.8 358 45.3
Prupe.3G223600 Prunus persica HOM05D007205 ORTHO05D009175 8.2e-64 248.4 360 43.9
CSS0002540 Camellia sinensis var. sinensis HOM05D007205 ORTHO05D009175 1.8e-63 247.3 332 48.2
Thecc.02G165600 Theobroma cacao HOM05D007205 ORTHO05D009175 2.4e-63 246.9 354 44.4
Peaxi162Scf00007g00153 Petunia axillaris HOM05D007205 ORTHO05D009175 4.5e-62 242.7 351 44.4
Solyc07g053000.1 Solanum lycopersicum HOM05D007205 ORTHO05D009175 1.7e-61 240.7 351 43.6
PGSC0003DMG400040434 Solanum tuberosum HOM05D007205 ORTHO05D009175 2.9e-61 240.0 321 44.5
Cpa.g.sc34.48 Carica papaya HOM05D007205 ORTHO05D009175 5.0e-61 239.2 354 44.9
Sopen07g026550 Solanum pennellii HOM05D007205 ORTHO05D009175 5.0e-61 239.2 351 43.0
CAN.G86.36 Capsicum annuum HOM05D007205 ORTHO05D009175 6.5e-61 238.8 352 42.9
Sc12g0002500 Simmondsia chinensis HOM05D007205 ORTHO05D009175 2.5e-60 236.9 346 43.1
Duzib132G1034 Durio zibethinus HOM05D007205 ORTHO05D009175 4.2e-60 236.1 349 44.4
Nitab4.5_0009996g0030 Nicotiana tabacum HOM05D007205 ORTHO05D009175 5.5e-60 235.7 309 46.6
SalBow2G2732 Salvia bowleyana HOM05D007205 ORTHO05D009175 5.5e-60 235.7 345 45.2
Lj8P120T45 Lonicera japonica HOM05D007205 ORTHO05D009175 1.2e-59 234.6 311 48.9
Ca_01558_v3 Cicer arietinum L. HOM05D007205 ORTHO05D009175 2.7e-59 233.4 361 41.8
Rhsim06G0154800 Rhododendron simsii HOM05D007205 ORTHO05D009175 4.6e-59 232.6 360 41.9
ClCG02G001450 Citrullus lanatus HOM05D007205 ORTHO05D009175 6.1e-59 232.3 370 42.7
Sed0009741 Sechium edule HOM05D007205 ORTHO05D009175 1.8e-58 230.7 355 42.8
SGA_v2.0_scaffold10G05347 Striga asiatica HOM05D007205 ORTHO05D009175 8.8e-58 228.4 352 42.9
COL.COLO4_13041 Corchorus olitorius HOM05D007205 ORTHO05D009175 7.4e-57 225.3 345 44.3
MELO3C018783.2 Cucumis melo HOM05D007205 ORTHO05D009175 2.8e-56 223.4 373 41.8
TPR.G18059 Trifolium pratense HOM05D007205 ORTHO05D009175 4.8e-56 222.6 359 39.8
Migut.F01128 Erythranthe guttata HOM05D007205 ORTHO05D009175 6.3e-56 222.2 340 40.9
Psat5g266880 Pisum sativum HOM05D007205 ORTHO05D009175 2.4e-55 220.3 355 41.7
Medtr2g089200 Medicago truncatula HOM05D007205 ORTHO05D009175 4.1e-55 219.5 361 40.2
A03p03030 Brassica napus HOM05D007205 ORTHO05D009175 9.1e-55 218.4 348 40.2
Nitab4.5_0001134g0050 Nicotiana tabacum HOM05D007205 ORTHO05D009175 9.1e-55 218.4 327 42.8
Sp6g35950 Schrenkiella parvula HOM05D007205 ORTHO05D009175 9.1e-55 218.4 341 41.9
Phvul.002G284500 Phaseolus vulgaris HOM05D007205 ORTHO05D009175 1.2e-54 218.0 358 39.9
VMungo0251G0055 Vigna mungo HOM05D007205 ORTHO05D009175 3.4e-54 216.5 359 39.0
FAN14G2816 Fragaria x ananassa HOM05D007205 ORTHO05D009175 5.9e-54 215.7 366 42.9
FvH4_6g43900 Fragaria vesca HOM05D007205 ORTHO05D009175 1.0e-53 214.9 366 42.6
DCAR_019203 Daucus carota HOM05D007205 ORTHO05D009175 2.9e-53 213.4 350 39.1
BraA03t09662Z Brassica rapa HOM05D007205 ORTHO05D009175 3.8e-53 213.0 342 39.5
Lsat_1_v5_gn_3_42520 Lactuca sativa HOM05D007205 ORTHO05D009175 6.5e-53 212.2 347 39.5
Lj3g0018731 Lotus japonicus HOM05D007205 ORTHO05D009175 1.4e-52 211.1 362 38.7
Lalb_Chr24g0393611 Lupinus albus HOM05D007205 ORTHO05D009175 1.9e-52 210.7 362 40.3
BcaB01g02893 Brassica carinata HOM05D007205 ORTHO05D009175 1.2e-51 208.0 344 41.0
Thhalv10015696m.g Eutrema salsugineum HOM05D007205 ORTHO05D009175 2.1e-51 207.2 342 41.5
THA.LOC104826759 Tarenaya hassleriana HOM05D007205 ORTHO05D009175 3.6e-51 206.5 356 40.2
CsaV3_7G003940 Cucumis sativus L. HOM05D007205 ORTHO05D009175 4.7e-51 206.1 326 42.9
BcaC02g10449 Brassica carinata HOM05D007205 ORTHO05D009175 6.1e-51 205.7 350 40.9
C04p28790 Brassica napus HOM05D007205 ORTHO05D009175 6.1e-51 205.7 350 40.9
MBI18_g38398_MAGBIO Magnolia biondii HOM05D007205 ORTHO05D009175 1.8e-50 204.1 337 41.2
FAN09G0942 Fragaria x ananassa HOM05D007205 ORTHO05D009175 8.8e-50 201.8 353 41.4
CARHR206230 Cardamine hirsuta HOM05D007205 ORTHO05D009175 1.5e-49 201.1 344 40.1
AL6G17070 Arabidopsis lyrata HOM05D007205 ORTHO05D009175 2.0e-49 200.7 359 40.7
Aa31sc947G10 Aethionema arabicum HOM05D007205 ORTHO05D009175 2.6e-49 200.3 344 40.1
Glyma.13G304100 Glycine max HOM05D007205 ORTHO05D009175 2.6e-49 200.3 362 38.7
Aa31sc352G30 Aethionema arabicum HOM05D007205 ORTHO05D009175 3.3e-49 199.9 345 39.7
Aa31sc535G20 Aethionema arabicum HOM05D007205 ORTHO05D009175 3.3e-49 199.9 344 40.1
arahy.Tifrunner.gnm1.ann1.G6KXX8 Arachis hypogaea HOM05D007205 ORTHO05D009175 5.7e-49 199.1 377 38.2
Carub.0130s0001 Capsella rubella HOM05D007205 ORTHO05D009175 2.8e-48 196.8 344 39.8
ECA233G0199 Erigeron canadensis HOM05D007205 ORTHO05D009175 2.8e-48 196.8 317 40.1
RcHm_v2.0_Chr6g0278031 Rosa chinensis HOM05D007205 ORTHO05D009175 2.8e-48 196.8 292 45.9
AT5G06920 Arabidopsis thaliana HOM05D007205 ORTHO05D009175 3.7e-48 196.4 361 40.7
Carub.0006s0584 Capsella rubella HOM05D007205 ORTHO05D009175 4.8e-48 196.1 344 39.8
HanXRQChr17g0564241 Helianthus annuus HOM05D007205 ORTHO05D009175 6.3e-48 195.7 316 39.6
Aa31sc1365G10 Aethionema arabicum HOM05D007205 ORTHO05D009175 1.1e-47 194.9 346 39.9
Aa31sc352G60 Aethionema arabicum HOM05D007205 ORTHO05D009175 4.1e-47 193.0 344 39.2
Oeu040642.1 Olea europaea HOM05D007205 ORTHO05D009175 6.5e-45 185.7 259 45.9
arahy.Tifrunner.gnm1.ann1.WFU09D Arachis hypogaea HOM05D007205 ORTHO05D009175 8.5e-45 185.3 363 38.0
Eucgr.A01741 Eucalyptus grandis HOM05D007205 ORTHO05D009175 1.1e-44 184.9 308 40.6
HanXRQChr17g0542941 Helianthus annuus HOM05D007205 ORTHO05D009175 1.9e-44 184.1 309 37.5
PGR042G1067 Punica granatum HOM05D007205 ORTHO05D009175 2.7e-43 180.3 355 35.2
Actinidia12481 Actinidia chinensis HOM05D007205 ORTHO05D009175 2.7e-35 153.7 358 34.1
FAN05G5134 Fragaria x ananassa HOM05D007205 ORTHO05D009175 9.7e-33 145.2 358 36.0
FAN02G3251 Fragaria x ananassa HOM05D007205 ORTHO05D009175 1.2e-30 138.3 356 37.1
A03p67950 Brassica napus HOM05D007205 ORTHO05D009175 1.1e-28 131.7 243 36.6
BraA01t02676Z Brassica rapa HOM05D007205 ORTHO05D009175 1.1e-28 131.7 243 36.6
SEGI_15553 Sequoiadendron giganteum HOM05D007205 ORTHO05D009175 1.1e-28 131.7 346 31.2
SEGI_37477 Sequoiadendron giganteum HOM05D007205 ORTHO05D009175 5.5e-28 129.4 346 30.1
FAN05G3426 Fragaria x ananassa HOM05D007205 ORTHO05D009175 7.2e-28 129.0 250 37.2
unitig_0.g450 Utricularia gibba HOM05D007205 ORTHO05D009175 1.0e-21 108.6 229 34.9
RcHm_v2.0_Chr2g0160671 Rosa chinensis HOM05D007205 ORTHO05D009175 1.6e-19 101.3 139 43.9
Duzib168G1669 Durio zibethinus HOM05D007205 ORTHO05D009175 9.2e-15 85.5 123 45.5
RcHm_v2.0_Chr1g0324271 Rosa chinensis HOM05D007205 ORTHO05D009175 2.3e-13 80.9 148 41.9
RcHm_v2.0_Chr4g0411281 Rosa chinensis HOM05D007205 ORTHO05D009175 5.0e-13 79.7 148 41.2
SGA_v2.0_scaffold70G23481 Striga asiatica HOM05D007205 ORTHO05D009175 5.0e-13 79.7 181 35.9
BcaB01g05708 Brassica carinata HOM05D007205 ORTHO05D009175 6.6e-13 79.3 180 34.4
MD13G1026900 Malus domestica HOM05D002727 ORTHO05D002856 1.9e-12 77.8 304 26.3
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 2.5e-12 77.4 298 25.5
Cpa.g.sc131.23 Carica papaya HOM05D006072 ORTHO05D007363 9.5e-12 75.5 358 25.1
Nn3g18504 Nelumbo nucifera HOM05D006072 ORTHO05D007363 2.1e-11 74.3 334 25.1
Nitab4.5_0000876g0020 Nicotiana tabacum HOM05D006072 ORTHO05D007363 3.6e-11 73.6 347 25.4
Lalb_Chr07g0184981 Lupinus albus HOM05D006072 ORTHO05D007363 4.7e-11 73.2 354 27.1
Phvul.002G262300 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 8.0e-11 72.4 358 26.3
VMungo0251G2066 Vigna mungo HOM05D006072 ORTHO05D007363 8.0e-11 72.4 359 25.9
Duzib147G1157 Durio zibethinus HOM05D006072 ORTHO05D007363 2.3e-10 70.9 340 27.1
Duzib187G0709 Durio zibethinus HOM05D006072 ORTHO05D007363 2.3e-10 70.9 363 27.0
SGA_v2.0_scaffold55G19813 Striga asiatica HOM05D006072 ORTHO05D007363 2.3e-10 70.9 290 28.6
Haze_24990 Corylus avellana HOM05D006072 ORTHO05D007363 5.2e-10 69.7 335 25.7
BcaB01g06014 Brassica carinata HOM05D007205 ORTHO05D009175 6.8e-10 69.3 249 30.1
Ciclev10025690m.g Citrus clementina HOM05D006072 ORTHO05D007363 6.8e-10 69.3 314 27.1
Cc02_g18000 Coffea canephora HOM05D006072 ORTHO05D007363 8.9e-10 68.9 280 26.4
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 1.2e-09 68.6 346 24.9
Cfa002714 Carpinus fangiana HOM05D006072 ORTHO05D007363 2.6e-09 67.4 332 25.0
Gorai.007G241900 Gossypium raimondii HOM05D006072 ORTHO05D007363 2.6e-09 67.4 344 27.6
TAR622G0191 Trochodendron aralioides HOM05D006072 ORTHO05D007363 3.4e-09 67.0 338 24.6
ATR0598G256 Amborella trichopoda HOM05D006072 ORTHO05D007363 4.4e-09 66.6 347 25.6
DCAR_023269 Daucus carota HOM05D006072 ORTHO05D007363 4.4e-09 66.6 344 25.9
Thecc.01G107000 Theobroma cacao HOM05D006072 ORTHO05D007363 4.4e-09 66.6 357 27.5
Glyma.05G181300 Glycine max HOM05D006072 ORTHO05D007363 5.8e-09 66.2 322 25.5
Lj4g0019082 Lotus japonicus HOM05D006072 ORTHO05D007363 5.8e-09 66.2 369 26.0
GSVIVG01011560001 Vitis vinifera HOM05D006072 ORTHO05D007363 5.8e-09 66.2 332 26.2
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 7.5e-09 65.9 310 24.2
FAN03G1798 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.5e-09 65.9 303 24.4
Gohir.D11G224600 Gossypium hirsutum HOM05D006072 ORTHO05D007363 7.5e-09 65.9 344 27.3
Psat7g053120 Pisum sativum HOM05D006072 ORTHO05D007363 7.5e-09 65.9 346 27.2
Potri.005G079500 Populus trichocarpa HOM05D006072 ORTHO05D007363 7.5e-09 65.9 331 26.0
Migut.N01215 Erythranthe guttata HOM05D006072 ORTHO05D007363 9.8e-09 65.5 286 25.5
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 9.8e-09 65.5 305 25.2
Gohir.A11G199500 Gossypium hirsutum HOM05D006072 ORTHO05D007363 9.8e-09 65.5 344 27.3
Lsat_1_v5_gn_3_92501 Lactuca sativa HOM05D006072 ORTHO05D007363 9.8e-09 65.5 329 25.8
Sopen10g022790 Solanum pennellii HOM05D006072 ORTHO05D007363 9.8e-09 65.5 345 24.1
GSVIVG01011561001 Vitis vinifera HOM05D006072 ORTHO05D007363 9.8e-09 65.5 345 24.9
Atru.chr4.239 Acer truncatum HOM05D006072 ORTHO05D007363 1.3e-08 65.1 348 25.6
Actinidia24189 Actinidia chinensis HOM05D006072 ORTHO05D007363 2.2e-08 64.3 336 25.0
Gohir.D12G095100 Gossypium hirsutum HOM05D006072 ORTHO05D007363 2.2e-08 64.3 372 26.3
GSVIVG01011570001 Vitis vinifera HOM05D006072 ORTHO05D007363 2.9e-08 63.9 300 26.0
CAN.G1.46 Capsicum annuum HOM05D006072 ORTHO05D007363 3.7e-08 63.5 345 23.8
CsaV3_5G028530 Cucumis sativus L. HOM05D002727 ORTHO05D002856 8.3e-08 62.4 300 25.0
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 8.3e-08 62.4 308 28.9
Gorai.008G103500 Gossypium raimondii HOM05D006072 ORTHO05D007363 8.3e-08 62.4 347 25.9
Peaxi162Scf00003g00145 Petunia axillaris HOM05D006072 ORTHO05D007363 8.3e-08 62.4 356 24.4
QL06p050421 Quercus lobata HOM05D006072 ORTHO05D007363 1.1e-07 62.0 347 26.2
TPR.G2161 Trifolium pratense HOM05D006072 ORTHO05D007363 1.1e-07 62.0 348 26.4
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 1.4e-07 61.6 362 26.2
CAN.G86.39 Capsicum annuum HOM05D007205 ORTHO05D009175 1.9e-07 61.2 93 37.6
Atru.chr6.2573 Acer truncatum HOM05D002727 ORTHO05D002856 3.2e-07 60.5 307 26.7
Sed0008746 Sechium edule HOM05D002727 ORTHO05D002856 4.1e-07 60.1 331 23.9
MBI19_g02922_MAGBIO Magnolia biondii HOM05D006072 ORTHO05D007363 7.0e-07 59.3 358 23.7
Manes.12G138600 Manihot esculenta HOM05D006072 ORTHO05D007363 7.0e-07 59.3 360 23.6
Sc18g0004880 Simmondsia chinensis HOM05D006072 ORTHO05D007363 7.0e-07 59.3 320 25.9
Sabra07G0072700 Salix brachista HOM05D006072 ORTHO05D007363 1.2e-06 58.5 349 23.5
SalBow3G0772 Salvia bowleyana HOM05D006072 ORTHO05D007363 1.2e-06 58.5 286 23.8
Aqoxy4G00571 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 1.6e-06 58.2 133 30.8
Aqoxy4G00561 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 2.0e-06 57.8 133 30.8
Cpa.g.sc171.13 Carica papaya HOM05D002727 ORTHO05D002856 2.0e-06 57.8 323 27.6
CiPaw.03G138500 Carya illinoinensis HOM05D006072 ORTHO05D007363 2.0e-06 57.8 308 23.4
Haze_11036 Corylus avellana HOM05D002727 ORTHO05D002856 2.0e-06 57.8 312 25.3
Gohir.A12G093200 Gossypium hirsutum HOM05D006072 ORTHO05D007363 2.7e-06 57.4 360 26.4
Nitab4.5_0004318g0070 Nicotiana tabacum HOM05D006072 ORTHO05D007363 2.7e-06 57.4 311 24.8
Nitab4.5_0006309g0060 Nicotiana tabacum HOM05D006072 ORTHO05D007363 2.7e-06 57.4 325 25.2
TAR629G3443 Trochodendron aralioides HOM05D006072 ORTHO05D007363 4.6e-06 56.6 302 24.5
Glyma.08G139000 Glycine max HOM05D006072 ORTHO05D007363 6.0e-06 56.2 348 23.9
Peaxi162Scf00003g00149 Petunia axillaris HOM05D006072 ORTHO05D007363 6.0e-06 56.2 330 23.6
Prupe.3G306500 Prunus persica HOM05D002727 ORTHO05D002856 6.0e-06 56.2 313 26.2
ECA246G2885 Erigeron canadensis HOM05D006072 ORTHO05D007363 7.8e-06 55.8 312 23.4


User provided reference genes

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