Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 1.3e-244 849.4 440 100.0
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 8.0e-231 803.5 443 94.8
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 1.4e-78 297.7 460 45.7
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 1.1e-73 281.6 494 44.3
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 4.5e-64 249.6 452 40.9
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 9.3e-62 241.9 442 42.1
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 2.1e-61 240.7 480 39.2
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 4.6e-61 239.6 487 38.2
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 5.1e-60 236.1 455 40.4
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 2.5e-59 233.8 464 39.0
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 4.0e-57 226.5 478 38.5
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 1.7e-55 221.1 459 38.3
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 2.9e-55 220.3 447 38.7
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 8.4e-55 218.8 476 39.3
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 1.1e-54 218.4 459 39.2
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 1.4e-54 218.0 471 38.6
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 4.2e-54 216.5 449 39.2
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 9.3e-54 215.3 453 36.4
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 2.1e-53 214.2 455 38.5
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 2.7e-53 213.8 503 35.8
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 1.0e-52 211.8 456 39.0
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 3.9e-52 209.9 453 38.6
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 5.1e-52 209.5 472 36.7
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 8.7e-52 208.8 450 38.2
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 8.7e-52 208.8 480 36.7
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 1.1e-51 208.4 467 37.5
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 1.5e-51 208.0 453 38.0
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 7.4e-51 205.7 451 36.8
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 1.3e-50 204.9 461 36.7
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.6e-50 204.5 456 38.8
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 4.8e-50 203.0 477 36.3
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 6.2e-50 202.6 201 56.2
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 6.2e-50 202.6 456 39.9
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 1.4e-49 201.4 457 37.4
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 1.8e-49 201.1 460 37.0
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 3.1e-49 200.3 448 36.6
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 6.9e-49 199.1 487 35.3
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 1.2e-48 198.4 459 37.7
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.0e-48 197.6 459 36.2
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 4.5e-48 196.4 458 37.6
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 7.6e-48 195.7 468 37.4
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 1.0e-47 195.3 510 34.7
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 3.8e-47 193.4 458 35.2
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 6.5e-47 192.6 448 35.7
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 1.4e-46 191.4 455 35.8
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.9e-46 191.0 447 35.1
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 3.2e-46 190.3 462 36.8
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 7.2e-46 189.1 460 35.4
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 2.1e-45 187.6 454 36.8
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 5.7e-43 179.5 473 34.0
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 9.7e-43 178.7 464 34.7
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 1.6e-42 177.9 462 33.5
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 3.7e-42 176.8 447 33.6
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 1.4e-41 174.9 445 34.6
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 1.8e-41 174.5 466 35.8
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 5.3e-41 172.9 464 34.5
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 5.3e-41 172.9 450 33.6
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 1.0e-39 168.7 478 34.1
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 1.7e-39 167.9 450 34.2
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 6.5e-39 166.0 444 34.2
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 1.4e-38 164.9 394 36.5
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 1.4e-38 164.9 496 34.3
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 1.9e-38 164.5 461 34.5
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 1.9e-38 164.5 456 33.3
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 2.5e-38 164.1 459 35.5
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 4.2e-38 163.3 468 33.8
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 5.5e-38 162.9 453 35.1
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 2.1e-37 161.0 223 47.5
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 2.7e-37 160.6 451 34.1
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 3.6e-37 160.2 458 32.5
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 3.6e-37 160.2 458 32.5
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 3.6e-37 160.2 462 32.9
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 4.6e-37 159.8 451 34.1
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 1.0e-36 158.7 489 31.7
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 1.4e-36 158.3 458 32.3
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 1.8e-36 157.9 451 33.9
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 1.8e-36 157.9 453 34.2
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.1e-35 155.2 448 32.1
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 1.1e-35 155.2 453 32.9
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 1.5e-35 154.8 474 30.6
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 3.3e-35 153.7 433 33.3
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 7.4e-35 152.5 448 33.7
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 2.2e-34 151.0 199 47.7
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 2.8e-34 150.6 468 33.1
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 3.7e-34 150.2 455 34.1
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 4.8e-34 149.8 447 30.6
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 1.1e-33 148.7 169 54.4
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 1.1e-33 148.7 492 31.9
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 2.4e-33 147.5 445 33.0
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 4.1e-33 146.7 442 32.1
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 9.1e-33 145.6 327 35.8
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.5e-32 143.3 456 32.7
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.5e-32 143.3 456 32.7
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 4.2e-30 136.7 477 32.1
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 8.8e-28 129.0 461 28.6
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 9.7e-27 125.6 286 36.7
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 1.7e-26 124.8 503 28.0
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 3.2e-22 110.5 299 32.4
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 4.7e-21 106.7 123 52.0
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 1.0e-20 105.5 195 37.4
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 1.4e-20 105.1 183 42.1
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 3.3e-19 100.5 144 45.8
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.2e-18 97.8 331 28.7
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.4e-17 95.1 131 48.1
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 1.2e-16 92.0 451 27.3
Ah.01g015540 Amaranthus hybridus HOM05D006668 ORTHO05D008252 4.8e-10 70.1 150 36.7
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 1.4e-09 68.6 220 34.5
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 3.5e-08 63.9 470 26.0
Sabra07G0109400 Salix brachista HOM05D006668 ORTHO05D008252 9.4e-06 55.8 71 47.9


User provided reference genes

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