Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8150 Papaver somniferum HOM05D003913 ORTHO05D004803 4.3e-106 389.0 400 100.0
PSO541G3150 Papaver somniferum HOM05D003913 ORTHO05D004803 9.9e-87 324.7 400 86.5
Dinv13071 Davidia involucrata HOM05D003913 ORTHO05D004803 5.9e-63 245.7 398 53.8
Manes.02G188000 Manihot esculenta HOM05D003913 ORTHO05D004803 5.9e-63 245.7 391 74.4
CsaV3_6G002750 Cucumis sativus L. HOM05D003913 ORTHO05D004803 8.5e-62 241.9 384 76.6
PGR031G2719 Punica granatum HOM05D003913 ORTHO05D004803 1.1e-61 241.5 385 76.6
Dinv44716 Davidia involucrata HOM05D003913 ORTHO05D004803 1.4e-61 241.1 399 55.6
MELO3C024997.2 Cucumis melo HOM05D003913 ORTHO05D004803 1.9e-61 240.7 384 76.3
ClCG08G002560 Citrullus lanatus HOM05D003913 ORTHO05D004803 1.6e-60 237.7 398 74.9
Sed0012824 Sechium edule HOM05D003913 ORTHO05D004803 3.6e-60 236.5 384 68.5
RcHm_v2.0_Chr6g0272901 Rosa chinensis HOM05D003913 ORTHO05D004803 1.3e-59 234.6 395 81.3
CSS0047372 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 1.8e-59 234.2 391 79.8
Prupe.8G049100 Prunus persica HOM05D003913 ORTHO05D004803 3.0e-59 233.4 385 75.8
TWI12G0147 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 3.9e-59 233.0 386 79.8
FvH4_2g12470 Fragaria vesca HOM05D003913 ORTHO05D004803 5.1e-59 232.6 386 82.1
Sed0004416 Sechium edule HOM05D003913 ORTHO05D004803 5.7e-58 229.2 400 73.5
FAN24G0738 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.3e-57 228.0 386 81.6
MD02G1272000 Malus domestica HOM05D003913 ORTHO05D004803 1.8e-56 224.2 393 75.3
Potri.019G087200 Populus trichocarpa HOM05D003913 ORTHO05D004803 2.4e-56 223.8 398 72.1
Oeu053831.1 Olea europaea HOM05D003913 ORTHO05D004803 9.0e-56 221.9 387 70.0
MD07G1041000 Malus domestica HOM05D003913 ORTHO05D004803 2.0e-55 220.7 393 72.8
Lsat_1_v5_gn_9_43060 Lactuca sativa HOM05D003913 ORTHO05D004803 4.5e-55 219.5 378 79.4
FvH4_5g22350 Fragaria vesca HOM05D003913 ORTHO05D004803 1.0e-54 218.4 382 75.1
FAN18G2025 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.0e-54 218.4 382 75.1
FAN18G2798 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.0e-54 218.4 382 75.1
Aqoxy1G00206 Aquilegia oxysepala HOM05D003913 ORTHO05D004803 1.3e-54 218.0 394 68.3
Ciclev10008663m.g Citrus clementina HOM05D003913 ORTHO05D004803 1.3e-54 218.0 384 72.4
FAN08G0696 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.3e-54 218.0 383 74.9
ECA232G2276 Erigeron canadensis HOM05D003913 ORTHO05D004803 3.8e-54 216.5 399 75.4
BcaC08g46615 Brassica carinata HOM05D003913 ORTHO05D004803 5.0e-54 216.1 389 66.8
MBI10_g42737_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 5.0e-54 216.1 344 86.0
Lalb_Chr20g0121511 Lupinus albus HOM05D003913 ORTHO05D004803 2.5e-53 213.8 382 46.6
C06p45910 Brassica napus HOM05D003913 ORTHO05D004803 5.5e-53 212.6 382 67.8
Cc11_g02860 Coffea canephora HOM05D003913 ORTHO05D004803 5.5e-53 212.6 392 71.4
Nn3g16733 Nelumbo nucifera HOM05D003913 ORTHO05D004803 9.4e-53 211.8 391 74.9
AL2G31420 Arabidopsis lyrata HOM05D003913 ORTHO05D004803 1.6e-52 211.1 403 65.3
CiPaw.15G007000 Carya illinoinensis HOM05D003913 ORTHO05D004803 1.6e-52 211.1 383 70.2
BolC6t39643H Brassica oleracea HOM05D003913 ORTHO05D004803 2.1e-52 210.7 388 67.0
RcHm_v2.0_Chr7g0210071 Rosa chinensis HOM05D003913 ORTHO05D004803 2.1e-52 210.7 391 73.9
HanXRQChr11g0320411 Helianthus annuus HOM05D003913 ORTHO05D004803 3.6e-52 209.9 401 75.6
TAR625G1217 Trochodendron aralioides HOM05D003913 ORTHO05D004803 4.6e-52 209.5 385 74.5
Actinidia29569 Actinidia chinensis HOM05D003913 ORTHO05D004803 6.1e-52 209.1 386 71.8
Thhalv10018505m.g Eutrema salsugineum HOM05D003913 ORTHO05D004803 1.4e-51 208.0 384 68.0
TWI75G1061 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 1.4e-51 208.0 399 74.7
Aa31LG4G8790 Aethionema arabicum HOM05D003913 ORTHO05D004803 1.8e-51 207.6 413 65.1
Lj5g0008809 Lotus japonicus HOM05D003913 ORTHO05D004803 1.8e-51 207.6 393 41.2
CARHR290910 Cardamine hirsuta HOM05D003913 ORTHO05D004803 5.1e-51 206.1 388 61.3
Gohir.A09G169700 Gossypium hirsutum HOM05D003913 ORTHO05D004803 5.1e-51 206.1 392 49.7
Rhsim04G0038100 Rhododendron simsii HOM05D003913 ORTHO05D004803 6.7e-51 205.7 407 73.7
BcaB03g15621 Brassica carinata HOM05D003913 ORTHO05D004803 3.3e-50 203.4 390 64.1
BraA07t31364Z Brassica rapa HOM05D003913 ORTHO05D004803 3.3e-50 203.4 383 66.1
Atru.chr13.1880 Acer truncatum HOM05D003913 ORTHO05D004803 4.4e-50 203.0 391 70.8
Gorai.006G187200 Gossypium raimondii HOM05D003913 ORTHO05D004803 5.7e-50 202.6 391 44.0
Lj4A109T49 Lonicera japonica HOM05D003913 ORTHO05D004803 7.4e-50 202.2 385 73.5
GSVIVG01015205001 Vitis vinifera HOM05D003913 ORTHO05D004803 7.4e-50 202.2 400 58.2
Gohir.D09G165400 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.3e-49 201.4 391 43.7
CDE08G0059 Ceratophyllum demersum HOM05D003913 ORTHO05D004803 1.7e-49 201.1 377 67.9
BcaC08g45753 Brassica carinata HOM05D003913 ORTHO05D004803 3.7e-49 199.9 390 66.7
AT1G71840 Arabidopsis thaliana HOM05D003913 ORTHO05D004803 8.2e-49 198.7 402 66.2
Sp5g26870 Schrenkiella parvula HOM05D003913 ORTHO05D004803 1.1e-48 198.4 388 65.2
SpUn0020_0100 Schrenkiella parvula HOM05D003913 ORTHO05D004803 1.1e-48 198.4 388 65.2
BolC6t38638H Brassica oleracea HOM05D003913 ORTHO05D004803 4.1e-48 196.4 400 49.5
LjContig00222g0022410 Lotus japonicus HOM05D003913 ORTHO05D004803 5.3e-48 196.1 390 43.3
FAN04G3257 Fragaria x ananassa HOM05D003913 ORTHO05D004803 6.9e-48 195.7 417 61.4
Gohir.D06G113300 Gossypium hirsutum HOM05D003913 ORTHO05D004803 9.1e-48 195.3 390 46.2
Gorai.010G129100 Gossypium raimondii HOM05D003913 ORTHO05D004803 9.1e-48 195.3 390 45.9
ECA236G4407 Erigeron canadensis HOM05D003913 ORTHO05D004803 1.2e-47 194.9 377 44.0
SalBow7G2889 Salvia bowleyana HOM05D003913 ORTHO05D004803 1.2e-47 194.9 397 60.5
Lj2C196T3 Lonicera japonica HOM05D003913 ORTHO05D004803 1.5e-47 194.5 393 47.3
CANSAT25G1043 Cannabis sativa HOM05D003913 ORTHO05D004803 2.0e-47 194.1 387 70.0
Hund19608 Selenicereus undatus HOM05D003913 ORTHO05D004803 2.0e-47 194.1 438 64.6
BraA07t30691Z Brassica rapa HOM05D003913 ORTHO05D004803 3.4e-47 193.4 400 56.8
Nitab4.5_0002890g0020 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.0e-46 191.8 346 48.0
THA.LOC104826775 Tarenaya hassleriana HOM05D003913 ORTHO05D004803 1.0e-46 191.8 392 65.3
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 1.3e-46 191.4 379 40.1
A07p37990 Brassica napus HOM05D003913 ORTHO05D004803 1.7e-46 191.0 394 56.9
C06p35320 Brassica napus HOM05D003913 ORTHO05D004803 3.8e-46 189.9 414 51.9
Glyma.20G173100 Glycine max HOM05D003913 ORTHO05D004803 3.8e-46 189.9 380 49.5
A07p30560 Brassica napus HOM05D003913 ORTHO05D004803 6.5e-46 189.1 414 43.5
Sc16g0003970 Simmondsia chinensis HOM05D003913 ORTHO05D004803 2.5e-45 187.2 338 78.4
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 3.2e-45 186.8 379 39.6
Phvul.011G104600 Phaseolus vulgaris HOM05D003913 ORTHO05D004803 2.7e-44 183.7 386 55.4
Cfa018220 Carpinus fangiana HOM05D003913 ORTHO05D004803 4.7e-44 183.0 341 78.3
DCAR_000644 Daucus carota HOM05D003913 ORTHO05D004803 4.7e-44 183.0 394 46.7
Sabra13G0099000 Salix brachista HOM05D003913 ORTHO05D004803 4.7e-44 183.0 387 68.7
Nitab4.5_0000366g0190 Nicotiana tabacum HOM05D003913 ORTHO05D004803 6.1e-44 182.6 388 67.5
PGSC0003DMG400028735 Solanum tuberosum HOM05D003913 ORTHO05D004803 6.1e-44 182.6 388 67.3
VMungo1080G1176 Vigna mungo HOM05D003913 ORTHO05D004803 6.1e-44 182.6 386 51.3
Potri.013G116900 Populus trichocarpa HOM05D003913 ORTHO05D004803 1.8e-43 181.0 402 60.2
Ca_30575_v3 Cicer arietinum L. HOM05D003913 ORTHO05D004803 3.0e-43 180.3 396 38.1
MSTRG.9615 Avicennia marina HOM05D003913 ORTHO05D004803 6.7e-43 179.1 348 67.5
Solyc07g008860.3 Solanum lycopersicum HOM05D003913 ORTHO05D004803 2.0e-42 177.6 388 67.3
ATR0001G003 Amborella trichopoda HOM05D003913 ORTHO05D004803 2.6e-42 177.2 343 49.0
Duzib211G0424 Durio zibethinus HOM05D003913 ORTHO05D004803 2.6e-42 177.2 391 49.1
Sopen07g004790 Solanum pennellii HOM05D003913 ORTHO05D004803 2.6e-42 177.2 388 67.3
AUR62017935 Chenopodium quinoa HOM05D003913 ORTHO05D004803 4.4e-42 176.4 404 64.9
Sabra19G0097800 Salix brachista HOM05D003913 ORTHO05D004803 5.7e-42 176.0 404 73.0
Thecc.08G198300 Theobroma cacao HOM05D003913 ORTHO05D004803 2.2e-41 174.1 391 41.7
Ah.03g146560 Amaranthus hybridus HOM05D003913 ORTHO05D004803 4.8e-41 172.9 389 69.4
Psat6g188560 Pisum sativum HOM05D000168 ORTHO05D004803 6.3e-41 172.6 369 33.9
EL10Ac6g15251 Beta vulgaris HOM05D003913 ORTHO05D004803 1.4e-40 171.4 390 73.8
Oeu053830.1 Olea europaea HOM05D003913 ORTHO05D004803 1.4e-40 171.4 386 66.1
Sabra19G0101300 Salix brachista HOM05D003913 ORTHO05D004803 1.4e-40 171.4 404 71.0
GSVIVG01001592001 Vitis vinifera HOM05D003913 ORTHO05D004803 3.1e-40 170.2 390 69.5
Hma1.2p1_0276F.1_g111300 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 4.5e-39 166.4 322 76.7
FAN20G2057 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.5e-37 161.4 316 60.8
Carub.0002s1860 Capsella rubella HOM05D003913 ORTHO05D004803 2.5e-37 160.6 403 62.5
Zm00001eb362180 Zea mays HOM05D003913 ORTHO05D004803 2.5e-37 160.6 389 53.5
Rhsim06G0087400 Rhododendron simsii HOM05D003913 ORTHO05D004803 3.2e-37 160.2 495 59.4
HPP92_008098 Vanilla planifolia HOM05D003913 ORTHO05D004803 7.2e-37 159.1 398 64.6
Nitab4.5_0002890g0010 Nicotiana tabacum HOM05D003913 ORTHO05D004803 9.4e-37 158.7 328 45.4
Gohir.A06G109200 Gossypium hirsutum HOM05D003913 ORTHO05D004803 2.1e-36 157.5 361 39.9
DCAR_004603 Daucus carota HOM05D000366 ORTHO05D000437 3.6e-36 156.8 103 74.8
SGA_v2.0_scaffold114G31919 Striga asiatica HOM05D003913 ORTHO05D004803 3.6e-36 156.8 342 66.1
Os03g0685600 Oryza sativa ssp. japonica HOM05D003913 ORTHO05D004803 6.1e-36 156.0 379 58.3
MBI10_g41322_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 4.0e-35 153.3 123 62.6
VMungo0720G0336 Vigna mungo HOM05D003913 ORTHO05D004803 6.7e-35 152.5 388 50.0
TAR381G0993 Trochodendron aralioides HOM05D003913 ORTHO05D004803 8.8e-35 152.1 106 72.6
Zm00001eb139680 Zea mays HOM05D003913 ORTHO05D004803 1.2e-34 151.8 388 62.6
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 1.5e-34 151.4 108 72.2
Aa31LG7G6630 Aethionema arabicum HOM05D003913 ORTHO05D004803 2.0e-34 151.0 396 30.1
Migut.J01123 Erythranthe guttata HOM05D003913 ORTHO05D004803 3.3e-34 150.2 392 38.3
Cpa.g.sc2399.1 Carica papaya HOM05D003913 ORTHO05D004803 4.8e-33 146.4 108 69.4
COL.COLO4_13734 Corchorus olitorius HOM05D003913 ORTHO05D004803 6.3e-33 146.0 335 44.5
AUR62003626 Chenopodium quinoa HOM05D003913 ORTHO05D004803 1.8e-32 144.4 112 65.2
QL02p034830 Quercus lobata HOM05D003913 ORTHO05D004803 3.1e-32 143.7 103 68.0
arahy.Tifrunner.gnm1.ann1.A7TGXU Arachis hypogaea HOM05D003913 ORTHO05D004803 4.1e-32 143.3 408 33.8
CANSAT11G1897 Cannabis sativa HOM05D003913 ORTHO05D004803 9.1e-32 142.1 102 73.5
TPR.G30584 Trifolium pratense HOM05D003913 ORTHO05D004803 2.0e-31 141.0 401 35.7
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 3.5e-31 140.2 406 28.8
Migut.D01748 Erythranthe guttata HOM05D003913 ORTHO05D004803 1.0e-30 138.7 343 70.6
COL.COLO4_03395 Corchorus olitorius HOM05D003913 ORTHO05D004803 3.8e-30 136.7 110 65.5
unitig_747.g21315 Utricularia gibba HOM05D003913 ORTHO05D004803 1.9e-29 134.4 385 35.8
Eucgr.E02330 Eucalyptus grandis HOM05D003913 ORTHO05D004803 9.4e-29 132.1 123 56.1
SEGI_39165 Sequoiadendron giganteum HOM05D003913 ORTHO05D004803 1.6e-28 131.3 398 60.6
EL10Ac5g10958 Beta vulgaris HOM05D003913 ORTHO05D004803 2.7e-28 130.6 391 27.4
Glyma.10G218600 Glycine max HOM05D003913 ORTHO05D004803 4.0e-27 126.7 115 58.3
EL10Ac9g21859 Beta vulgaris HOM05D003913 ORTHO05D004803 8.8e-27 125.6 329 35.0
Psat6g019720 Pisum sativum HOM05D003913 ORTHO05D004803 2.0e-26 124.4 115 57.4
Migut.I00088 Erythranthe guttata HOM05D003913 ORTHO05D004803 4.4e-26 123.2 393 41.5
CARHR124080 Cardamine hirsuta HOM05D003913 ORTHO05D004803 9.8e-26 122.1 367 27.5
PSO455G0073 Papaver somniferum HOM05D003913 ORTHO05D004803 1.7e-25 121.3 62 88.7
Pp3c14_20020 Physcomitrium patens HOM05D003913 ORTHO05D004803 1.7e-25 121.3 403 59.8
AagrBONN_evm.TU.Sc2ySwM_368.376 Anthoceros agrestis HOM05D003913 ORTHO05D004803 3.7e-25 120.2 405 59.8
Peaxi162Scf01838g00003 Petunia axillaris HOM05D000173 ORTHO05D000316 3.7e-25 120.2 113 55.8
Haze_17883 Corylus avellana HOM05D003913 ORTHO05D004803 1.1e-24 118.6 490 52.4
Hma1.2p1_0276F.1_g111310 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 5.9e-23 112.8 132 49.2
AUR62024845 Chenopodium quinoa HOM05D003913 ORTHO05D004803 2.2e-22 110.9 381 26.2
Mapoly0155s0005 Marchantia polymorpha HOM05D003913 ORTHO05D004803 1.5e-21 108.2 398 34.4
SMO347G0114 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 1.5e-21 108.2 390 39.7
Glyma.09G057500 Glycine max HOM05D003913 ORTHO05D004803 3.2e-21 107.1 161 38.5
AUR62001664 Chenopodium quinoa HOM05D003913 ORTHO05D004803 2.1e-20 104.4 343 25.7
vmacro21210 Vaccinium macrocarpon HOM05D003913 ORTHO05D004803 4.7e-20 103.2 422 51.4
Lj4C56G20 Lonicera japonica HOM05D003913 ORTHO05D004803 2.0e-18 97.8 58 77.6
Glyma.10G218500 Glycine max HOM05D003913 ORTHO05D004803 2.8e-17 94.0 123 41.5
Medtr7g079470 Medicago truncatula HOM05D003913 ORTHO05D004803 2.7e-15 87.4 73 61.6
Thecc.09G236800 Theobroma cacao HOM05D003913 ORTHO05D004803 7.8e-15 85.9 55 70.9
Psat6g021120 Pisum sativum HOM05D003913 ORTHO05D004803 2.3e-14 84.3 120 40.0
BolC6t38649H Brassica oleracea HOM05D003913 ORTHO05D004803 1.1e-13 82.0 112 42.0
BraA02t06789Z Brassica rapa HOM05D003913 ORTHO05D004803 2.5e-13 80.9 50 74.0
A02p17440 Brassica napus HOM05D003913 ORTHO05D004803 9.5e-13 79.0 50 72.0
SHI13909 Sapria himalayana HOM05D003913 ORTHO05D004803 1.2e-12 78.6 89 49.4
SMO343G0013 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 1.8e-11 74.7 126 34.9
SMO367G0065 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 1.8e-11 74.7 357 22.7
Glyma.17G173200 Glycine max HOM05D003913 ORTHO05D004803 3.4e-10 70.5 42 71.4
CBR_g49506 Chara braunii HOM05D003913 ORTHO05D004803 3.7e-09 67.0 398 57.8
Medtr7g111550 Medicago truncatula HOM05D003913 ORTHO05D004803 4.9e-09 66.6 105 40.0
MCO10G384 Micromonas commoda HOM05D003913 ORTHO05D004803 8.3e-09 65.9 126 28.6
Cre12.g487200 Chlamydomonas reinhardtii HOM05D003913 ORTHO05D004803 1.8e-08 64.7 348 24.4


User provided reference genes

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