Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 4.2e-103 378.6 291 100.0
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 2.4e-82 309.7 290 85.2
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 4.8e-30 136.0 278 61.2
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 6.2e-30 135.6 293 60.8
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.1e-29 134.8 261 62.1
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 2.0e-28 130.6 271 61.3
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 4.4e-28 129.4 281 57.3
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 1.3e-27 127.9 305 58.0
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 6.4e-27 125.6 270 59.6
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 8.4e-27 125.2 261 59.4
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 8.4e-27 125.2 271 60.1
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 8.4e-27 125.2 269 59.1
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 8.4e-27 125.2 267 60.7
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 1.1e-26 124.8 267 59.9
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 2.4e-26 123.6 77 77.9
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 2.4e-26 123.6 77 77.9
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 2.4e-26 123.6 313 56.5
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 2.4e-26 123.6 266 60.2
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 5.4e-26 122.5 77 79.2
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 9.3e-26 121.7 77 77.9
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 9.3e-26 121.7 77 77.9
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 9.3e-26 121.7 77 77.9
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 9.3e-26 121.7 261 59.8
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.6e-25 120.9 67 86.6
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 2.1e-25 120.6 278 57.6
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 3.5e-25 119.8 279 60.6
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 4.6e-25 119.4 67 86.6
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 4.6e-25 119.4 266 58.3
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 4.6e-25 119.4 73 79.5
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 6.0e-25 119.0 264 55.7
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 6.0e-25 119.0 271 57.2
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 6.0e-25 119.0 294 55.4
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 7.8e-25 118.6 272 58.5
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 7.8e-25 118.6 271 57.2
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.3e-24 117.9 263 60.1
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.3e-24 117.9 293 53.6
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.7e-24 117.5 271 57.2
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 1.7e-24 117.5 93 64.5
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.3e-24 117.1 265 55.5
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 2.3e-24 117.1 80 68.8
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 3.0e-24 116.7 297 53.9
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.1e-24 115.9 262 58.8
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 5.1e-24 115.9 282 57.4
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 6.6e-24 115.5 269 61.0
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 6.6e-24 115.5 272 56.6
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 6.6e-24 115.5 266 58.3
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 8.7e-24 115.2 279 57.3
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 8.7e-24 115.2 75 77.3
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 1.9e-23 114.0 274 58.0
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.5e-23 113.6 293 53.2
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 3.3e-23 113.2 294 56.5
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 4.3e-23 112.8 272 55.1
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 5.6e-23 112.5 269 56.1
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 9.6e-23 111.7 265 58.1
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 9.6e-23 111.7 81 69.1
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 1.3e-22 111.3 294 57.5
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.3e-22 111.3 294 54.4
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.3e-22 111.3 287 57.1
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 3.6e-22 109.8 267 58.4
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 4.8e-22 109.4 271 58.7
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 6.2e-22 109.0 184 75.0
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 6.2e-22 109.0 184 75.0
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 6.2e-22 109.0 272 55.9
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 6.2e-22 109.0 276 57.6
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 8.1e-22 108.6 297 57.9
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.4e-21 107.8 267 58.1
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.4e-21 107.8 264 58.0
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 1.4e-21 107.8 267 56.2
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 1.8e-21 107.5 287 43.6
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 1.8e-21 107.5 68 73.5
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 2.4e-21 107.1 68 75.0
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 2.4e-21 107.1 291 54.6
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 3.1e-21 106.7 174 77.0
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 3.1e-21 106.7 270 55.2
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 3.1e-21 106.7 269 58.0
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 4.0e-21 106.3 193 71.0
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 4.0e-21 106.3 264 57.6
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 4.0e-21 106.3 261 58.6
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 4.0e-21 106.3 297 53.9
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 5.3e-21 105.9 68 70.6
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 5.3e-21 105.9 80 71.2
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 9.0e-21 105.1 269 56.1
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.5e-20 104.4 264 57.2
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 2.0e-20 104.0 265 58.5
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 5.8e-20 102.4 67 73.1
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 9.9e-20 101.7 91 58.2
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 2.2e-19 100.5 281 55.2
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 2.9e-19 100.1 287 57.1
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 1.1e-18 98.2 269 47.6
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.1e-18 98.2 72 72.2
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.4e-18 97.1 178 55.6
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 3.2e-18 96.7 71 69.0
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 9.3e-18 95.1 80 60.0
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 2.7e-17 93.6 71 67.6
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 3.5e-17 93.2 63 71.4
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 1.3e-16 91.3 69 66.7
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 1.3e-16 91.3 232 60.3
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 1.3e-16 91.3 260 55.8
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 1.9e-15 87.4 76 57.9
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 6.2e-14 82.4 54 75.9
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.4e-13 81.3 65 63.1
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 2.4e-13 80.5 233 60.9
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 5.3e-13 79.3 65 56.9
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 2.6e-12 77.0 278 52.9
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 5.8e-12 75.9 56 66.1
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.2e-10 70.1 237 55.3
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.6e-09 67.8 208 60.1
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 2.1e-09 67.4 54 53.7
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.5e-07 61.2 32 81.2
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 1.3e-06 58.2 178 43.8
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.6e-06 57.8 42 59.5
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.6e-06 57.8 232 25.9
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 1.6e-06 57.8 232 53.4


User provided reference genes

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