Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 6.7e-268 926.8 471 100.0
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 2.2e-255 885.2 471 96.4
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 1.2e-152 543.9 419 69.2
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.7e-152 542.7 427 69.1
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 3.0e-151 539.3 418 68.9
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 8.8e-151 537.7 416 67.8
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 2.8e-149 532.7 408 68.9
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.1e-148 530.8 378 72.5
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 3.1e-148 529.3 406 69.0
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 7.0e-148 528.1 397 69.0
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.2e-147 527.3 381 71.4
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 2.6e-147 526.2 387 69.8
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.5e-147 525.4 397 69.3
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 5.9e-147 525.0 378 71.2
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 7.7e-147 524.6 453 65.1
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.0e-146 524.2 409 67.7
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 1.3e-146 523.9 380 71.3
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 3.2e-145 519.2 371 72.2
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 3.2e-145 519.2 387 69.8
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 4.2e-145 518.8 426 65.5
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 5.5e-145 518.5 397 67.5
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 2.7e-144 516.2 394 67.8
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 3.6e-144 515.8 405 66.4
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 4.7e-144 515.4 405 66.2
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 6.1e-144 515.0 415 64.3
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 6.1e-144 515.0 400 67.5
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.0e-143 514.2 422 64.0
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.0e-143 514.2 439 62.4
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.0e-143 514.2 439 62.4
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.0e-143 514.2 422 64.5
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 1.4e-143 513.8 399 67.7
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 1.4e-143 513.8 382 69.6
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 2.3e-143 513.1 415 66.3
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 3.0e-143 512.7 378 69.0
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 6.7e-143 511.5 401 66.6
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 8.8e-143 511.1 408 65.4
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.1e-142 510.8 431 62.9
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.1e-142 510.8 380 69.2
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.1e-142 510.8 414 66.4
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 2.0e-142 510.0 364 72.5
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.6e-142 509.6 443 63.4
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 5.7e-142 508.4 471 60.3
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 3.7e-141 505.8 395 66.1
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.8e-141 505.4 462 60.4
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 6.3e-141 505.0 376 68.4
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 8.2e-141 504.6 394 67.0
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.1e-140 504.2 399 66.9
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.4e-140 503.1 381 68.0
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.1e-140 502.7 383 68.1
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.3e-140 501.9 396 65.4
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 9.1e-140 501.1 401 65.1
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.6e-139 500.4 467 58.0
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 7.7e-139 498.0 373 68.1
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.3e-138 497.3 411 65.0
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.3e-138 497.3 425 63.5
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 1.7e-138 496.9 378 67.7
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 2.2e-138 496.5 471 59.4
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 5.0e-138 495.4 410 63.7
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 2.5e-137 493.0 398 66.1
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.6e-136 490.3 435 62.5
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 1.6e-136 490.3 397 64.2
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.1e-136 490.0 453 59.6
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.7e-136 489.6 368 68.2
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 6.1e-136 488.4 388 66.8
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 2.3e-135 486.5 427 61.6
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 6.7e-135 485.0 399 65.7
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 2.6e-134 483.0 386 64.5
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 9.7e-134 481.1 420 61.7
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 8.2e-133 478.0 338 72.5
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 1.8e-132 476.9 371 68.2
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 1.2e-131 474.2 401 63.6
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 5.9e-131 471.9 425 62.1
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.7e-130 470.3 424 61.3
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.7e-130 470.3 338 71.3
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 2.9e-130 469.5 427 60.2
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.6e-128 463.8 465 58.1
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 1.8e-127 460.3 446 58.7
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 5.7e-126 455.3 464 54.3
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.1e-124 451.1 400 60.8
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 5.0e-122 442.2 391 60.1
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 5.5e-121 438.7 418 57.2
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 3.6e-120 436.0 391 58.6
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 1.3e-117 427.6 384 60.2
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 4.1e-116 422.5 422 55.5
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 4.1e-116 422.5 465 51.6
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 2.3e-111 406.8 508 50.0
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 9.8e-110 401.4 371 59.3
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 3.7e-109 399.4 440 52.3
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 1.1e-108 397.9 432 53.0
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 6.0e-107 392.1 385 56.4
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 3.0e-106 389.8 386 56.5
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 3.0e-106 389.8 386 56.5
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 3.0e-106 389.8 438 52.3
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.5e-105 387.5 464 50.0
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.5e-105 387.5 343 59.5
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 1.6e-104 384.0 391 55.0
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.1e-103 381.3 318 62.6
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 6.8e-103 378.6 451 50.3
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 3.3e-97 359.8 391 52.7
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 3.3e-97 359.8 391 52.7
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 3.6e-96 356.3 385 53.0
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 1.1e-95 354.8 380 53.9
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 1.1e-95 354.8 380 53.9
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 7.8e-91 338.6 457 46.4
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 7.1e-84 315.5 370 52.4
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 7.3e-81 305.4 232 68.1
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.0e-78 297.4 286 59.1
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 6.6e-74 282.3 217 63.6
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 8.4e-61 238.8 363 38.6
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 6.0e-59 232.6 161 75.2
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 4.8e-56 223.0 434 36.4
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 1.0e-50 205.3 139 72.7
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.9e-49 201.1 388 33.8
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.1e-39 168.7 118 71.2
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-39 168.7 120 69.2
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 1.0e-37 162.2 124 67.7
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 2.2e-37 161.0 472 31.4
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 2.3e-34 151.0 154 51.9
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 2.3e-34 151.0 235 43.4
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.2e-29 134.4 416 31.0
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.6e-27 128.3 125 56.8
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 8.0e-27 125.9 204 37.7
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.8e-23 114.8 284 31.0
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 4.5e-22 110.2 110 55.5
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 2.1e-19 101.3 78 65.4
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 2.1e-19 101.3 74 67.6
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.5e-09 68.6 48 68.8
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 8.3e-08 62.8 418 23.4
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 3.1e-07 60.8 236 24.6
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.6e-06 58.5 493 23.1
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 2.0e-06 58.2 399 23.8


User provided reference genes

Program Settings