Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 1.3e-126 456.4 237 100.0
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 3.4e-95 352.1 187 96.8
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 3.8e-78 295.4 242 66.1
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 3.2e-69 265.8 241 66.0
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 5.2e-67 258.5 235 62.1
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 1.2e-66 257.3 207 66.2
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 1.2e-66 257.3 223 63.7
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 1.2e-66 257.3 233 58.8
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 1.5e-66 256.9 226 65.0
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 4.4e-66 255.4 224 62.1
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 7.5e-66 254.6 224 64.7
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 9.7e-66 254.2 234 59.4
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 1.3e-65 253.8 246 58.5
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 2.2e-65 253.1 240 60.8
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 2.8e-65 252.7 239 61.5
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 4.8e-65 251.9 238 56.3
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 3.1e-64 249.2 224 61.2
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 4.1e-64 248.8 232 58.2
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 5.3e-64 248.4 240 57.1
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 9.1e-64 247.7 230 62.6
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 1.2e-63 247.3 224 62.9
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 1.6e-63 246.9 242 59.1
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 2.0e-63 246.5 186 68.3
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 2.7e-63 246.1 238 56.7
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 3.5e-63 245.7 242 58.3
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 3.5e-63 245.7 226 60.6
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 7.7e-63 244.6 220 61.4
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 1.7e-62 243.4 221 62.4
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 2.9e-62 242.7 221 61.5
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 6.5e-62 241.5 238 57.1
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 8.5e-62 241.1 239 56.9
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 1.5e-61 240.4 212 60.8
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.2e-60 237.3 237 55.7
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 2.7e-60 236.1 230 57.0
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 8.0e-60 234.6 187 64.2
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 8.0e-60 234.6 236 56.8
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 1.0e-59 234.2 216 58.3
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 1.8e-59 233.4 239 56.5
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 4.0e-59 232.3 216 57.9
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 5.2e-59 231.9 221 58.4
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 5.2e-59 231.9 246 54.5
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.2e-58 230.7 221 60.2
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 1.5e-58 230.3 238 57.6
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.5e-58 230.3 238 57.6
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 3.4e-58 229.2 217 56.2
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 4.4e-58 228.8 222 57.2
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 9.8e-58 227.6 204 57.8
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 1.3e-57 227.3 183 62.3
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 2.8e-57 226.1 229 52.8
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 2.8e-57 226.1 243 53.9
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 1.1e-56 224.2 237 53.2
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 1.1e-56 224.2 228 55.3
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 1.1e-56 224.2 180 61.7
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.4e-56 223.8 211 58.8
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 2.4e-56 223.0 199 58.3
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 3.1e-56 222.6 243 52.3
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 3.1e-56 222.6 195 65.6
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 4.1e-56 222.2 193 59.6
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 5.4e-56 221.9 199 58.3
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 9.1e-56 221.1 180 61.1
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.2e-55 220.7 163 68.1
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.6e-55 220.3 192 60.4
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 1.6e-55 220.3 175 66.9
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 1.6e-55 220.3 226 54.4
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.7e-55 219.5 213 57.3
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 4.5e-55 218.8 290 49.0
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 2.9e-54 216.1 181 60.8
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 3.8e-54 215.7 194 59.3
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 3.8e-54 215.7 194 59.3
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 6.6e-54 214.9 191 59.2
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 6.6e-54 214.9 194 58.8
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 8.6e-54 214.5 235 52.3
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 1.9e-53 213.4 194 58.8
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 4.2e-53 212.2 224 54.5
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 5.5e-53 211.8 217 54.4
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 7.2e-53 211.5 180 61.7
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 7.2e-53 211.5 194 58.8
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 9.5e-53 211.1 205 54.1
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 3.0e-51 206.1 192 59.4
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 2.8e-49 199.5 150 65.3
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 4.1e-48 195.7 191 55.5
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 3.5e-47 192.6 172 58.7
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.5e-47 192.6 199 54.3
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 7.8e-47 191.4 227 49.8
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 4.7e-44 182.2 225 49.3
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 6.1e-44 181.8 172 54.7
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.8e-43 180.3 225 46.7
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 2.2e-41 173.3 181 56.4
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 9.2e-40 167.9 173 49.7
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.3e-37 159.5 212 46.7
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 5.6e-37 158.7 122 63.1
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 8.0e-36 154.8 212 44.8
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 3.4e-34 149.4 168 48.2
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 1.9e-32 143.7 170 45.9
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 5.4e-32 142.1 215 43.3
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 9.2e-32 141.4 133 56.4
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 6.0e-31 138.7 97 70.1
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 3.0e-30 136.3 168 47.6
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 2.0e-26 123.6 89 67.4
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.7e-23 113.2 89 65.2
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 2.3e-22 110.2 224 35.3
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 2.5e-21 106.7 121 47.9
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 3.6e-20 102.8 109 52.3
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 3.2e-16 89.7 73 60.3
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 4.4e-10 69.3 53 62.3
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 7.1e-08 62.0 43 69.8
Ah.05g167420 Amaranthus hybridus HOM05D007221 ORTHO05D009204 3.5e-07 59.7 42 64.3


User provided reference genes

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