Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 1.9e-147 525.8 260 100.0
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 2.1e-146 522.3 260 99.2
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 2.6e-80 302.8 272 58.8
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 3.4e-80 302.4 276 58.3
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 1.7e-79 300.1 268 57.8
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 2.2e-79 299.7 271 58.3
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 3.2e-78 295.8 272 55.1
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 9.3e-78 294.3 226 63.3
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 2.7e-77 292.7 271 57.2
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 6.0e-77 291.6 220 62.7
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 2.3e-76 289.7 271 56.8
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 1.5e-75 287.0 264 58.7
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 2.5e-75 286.2 271 56.5
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 4.3e-75 285.4 270 56.7
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 9.7e-75 284.3 273 58.6
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.6e-74 283.5 269 56.9
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 6.3e-74 281.6 269 56.9
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 1.1e-73 280.8 271 56.8
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 1.8e-73 280.0 258 57.4
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 3.1e-73 279.3 275 52.4
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 6.9e-73 278.1 267 54.7
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.5e-72 276.9 244 60.2
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 1.5e-72 276.9 270 57.8
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 2.0e-72 276.6 271 55.0
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 3.4e-72 275.8 267 56.2
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 4.5e-72 275.4 267 53.6
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 4.5e-72 275.4 226 61.5
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 7.6e-72 274.6 264 54.2
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 7.6e-72 274.6 204 64.7
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 1.3e-71 273.9 188 69.7
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 1.7e-71 273.5 265 54.3
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 2.9e-71 272.7 271 53.9
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 3.8e-71 272.3 271 56.5
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 5.0e-71 271.9 270 53.3
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 3.2e-70 269.2 259 52.5
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 3.2e-70 269.2 221 58.8
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 7.2e-70 268.1 250 55.6
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 1.6e-69 266.9 225 58.2
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.6e-69 266.9 225 58.2
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 2.1e-69 266.5 234 58.1
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 2.7e-69 266.2 276 51.4
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 4.6e-69 265.4 207 60.4
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 4.6e-69 265.4 216 59.7
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 6.1e-69 265.0 209 59.3
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 3.0e-68 262.7 209 59.8
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.9e-68 262.3 225 57.3
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 5.1e-68 261.9 261 53.6
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 8.7e-68 261.2 273 51.6
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.1e-67 260.8 238 54.2
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 1.5e-67 260.4 234 55.6
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 3.3e-67 259.2 265 51.3
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 3.3e-67 259.2 210 59.5
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 5.7e-67 258.5 239 54.0
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 7.4e-67 258.1 205 62.0
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 2.8e-66 256.1 204 58.8
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 4.8e-66 255.4 265 49.8
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 1.1e-65 254.2 237 54.0
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 2.0e-64 250.0 257 52.1
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 4.5e-64 248.8 256 51.6
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 2.2e-63 246.5 256 52.3
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 2.2e-63 246.5 277 48.0
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 2.9e-63 246.1 271 48.7
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 3.8e-63 245.7 245 54.3
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 5.0e-63 245.4 203 60.1
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 5.0e-63 245.4 195 60.0
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 6.5e-63 245.0 203 60.6
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 6.5e-63 245.0 234 53.8
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 1.1e-62 244.2 265 54.0
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 1.9e-62 243.4 267 53.6
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 1.9e-62 243.4 205 60.0
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 2.7e-61 239.6 198 60.1
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 6.1e-61 238.4 269 50.9
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 7.9e-61 238.0 272 47.8
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 7.9e-61 238.0 223 52.9
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 1.0e-60 237.7 212 56.6
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 1.8e-60 236.9 198 60.1
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 1.8e-60 236.9 269 50.6
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.9e-60 235.7 188 62.8
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.9e-60 235.7 188 62.8
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.9e-60 235.7 188 62.8
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 5.1e-60 235.3 265 50.6
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 5.1e-60 235.3 198 59.6
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 5.1e-60 235.3 270 50.0
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 5.1e-60 235.3 224 55.8
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 2.8e-58 229.6 253 48.6
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 6.9e-57 224.9 261 48.7
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 1.2e-56 224.2 266 47.4
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 2.6e-56 223.0 251 48.2
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 4.5e-56 222.2 241 48.1
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.0e-55 221.1 270 48.9
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 2.9e-55 219.5 197 57.9
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 2.9e-55 219.5 227 49.8
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 3.8e-55 219.2 265 49.8
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 6.5e-55 218.4 197 56.9
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.4e-54 217.2 216 49.1
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 7.9e-53 211.5 190 55.3
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 5.7e-51 205.3 205 52.7
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.8e-50 203.0 200 54.5
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 5.3e-49 198.7 202 53.5
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 4.2e-46 189.1 150 62.0
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.1e-45 186.8 198 53.0
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 3.7e-42 176.0 172 52.9
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 6.5e-39 165.2 205 49.3
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 7.0e-33 145.2 224 38.4
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 9.1e-33 144.8 260 36.2
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.5e-30 137.5 195 41.5
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 2.3e-23 113.6 188 41.0
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 5.8e-19 99.0 189 32.8
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 4.1e-17 92.8 90 52.2
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 5.4e-17 92.4 191 28.3
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.7e-16 90.1 66 65.2
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 6.0e-16 89.0 69 58.0
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 3.0e-15 86.7 143 34.3
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 8.6e-15 85.1 199 31.7
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 4.0e-12 76.3 68 61.8
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 4.0e-12 76.3 68 61.8


User provided reference genes

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