Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7621 Papaver somniferum HOM05D004034 ORTHO05D004210 5.8e-166 588.2 480 100.0
PSO541G4358 Papaver somniferum HOM05D004034 ORTHO05D004210 4.3e-113 412.5 477 83.9
PSO541G5987 Papaver somniferum HOM05D004034 ORTHO05D004210 4.5e-78 296.2 472 75.4
PSO675G4038 Papaver somniferum HOM05D004034 ORTHO05D004210 2.2e-77 293.9 473 75.3
Dinv02649 Davidia involucrata HOM05D004034 ORTHO05D004210 1.9e-55 221.1 466 59.0
TAR626G1796 Trochodendron aralioides HOM05D004034 ORTHO05D004210 1.2e-54 218.4 190 61.6
Nn3g21007 Nelumbo nucifera HOM05D004034 ORTHO05D004210 2.7e-54 217.2 181 61.3
Dinv12713 Davidia involucrata HOM05D004034 ORTHO05D004210 4.3e-52 209.9 182 59.3
Prupe.3G169100 Prunus persica HOM05D004034 ORTHO05D004210 1.6e-51 208.0 185 59.5
TAR627G0011 Trochodendron aralioides HOM05D004034 ORTHO05D004210 3.6e-51 206.8 144 70.8
MBI07_g00478_MAGBIO Magnolia biondii HOM05D004034 ORTHO05D004210 6.2e-51 206.1 187 59.4
QL08p043585 Quercus lobata HOM05D004034 ORTHO05D004210 4.0e-50 203.4 156 65.4
CSS0017431 Camellia sinensis var. sinensis HOM05D004034 ORTHO05D004210 1.5e-49 201.4 189 58.7
CSS0041707 Camellia sinensis var. sinensis HOM05D004034 ORTHO05D004210 1.5e-49 201.4 189 58.7
Aqoxy1G01912 Aquilegia oxysepala HOM05D004034 ORTHO05D004210 4.4e-49 199.9 183 59.6
Sc12g0003740 Simmondsia chinensis HOM05D004034 ORTHO05D004210 3.7e-48 196.8 473 64.9
Thecc.01G158900 Theobroma cacao HOM05D004034 ORTHO05D004210 3.7e-48 196.8 178 59.6
FAN02G3754 Fragaria x ananassa HOM05D004034 ORTHO05D004210 4.1e-47 193.4 180 59.4
Oeu026479.1 Olea europaea HOM05D004034 ORTHO05D004210 4.1e-47 193.4 144 65.3
Sed0007322 Sechium edule HOM05D004034 ORTHO05D004210 4.1e-47 193.4 178 59.6
MELO3C019705.2 Cucumis melo HOM05D004034 ORTHO05D004210 5.4e-47 193.0 156 63.5
RcHm_v2.0_Chr2g0150831 Rosa chinensis HOM05D004034 ORTHO05D004210 5.4e-47 193.0 158 62.7
FAN05G2656 Fragaria x ananassa HOM05D004034 ORTHO05D004210 7.1e-47 192.6 180 59.4
Ciclev10018355m.g Citrus clementina HOM05D004034 ORTHO05D004210 1.6e-46 191.4 183 58.5
MD09G1156200 Malus domestica HOM05D004034 ORTHO05D004210 2.7e-46 190.7 153 65.4
CsaV3_6G015660 Cucumis sativus L. HOM05D004034 ORTHO05D004210 4.6e-46 189.9 156 62.8
Oeu020935.1 Olea europaea HOM05D004034 ORTHO05D004210 6.0e-46 189.5 183 55.2
Peaxi162Scf00035g00315 Petunia axillaris HOM05D004034 ORTHO05D004210 6.0e-46 189.5 185 59.5
Rhsim06G0122000 Rhododendron simsii HOM05D004034 ORTHO05D004210 6.0e-46 189.5 144 63.9
ClCG02G018270 Citrullus lanatus HOM05D004034 ORTHO05D004210 7.8e-46 189.1 185 56.8
Eucgr.A01957 Eucalyptus grandis HOM05D004034 ORTHO05D004210 1.0e-45 188.7 151 64.2
MD17G1142500 Malus domestica HOM05D004034 ORTHO05D004210 1.0e-45 188.7 145 66.2
FvH4_6g37770 Fragaria vesca HOM05D004034 ORTHO05D004210 1.7e-45 188.0 180 57.8
FAN14G2402 Fragaria x ananassa HOM05D004034 ORTHO05D004210 1.7e-45 188.0 180 57.8
MSTRG.6767 Avicennia marina HOM05D004034 ORTHO05D004210 2.3e-45 187.6 173 57.2
DCAR_009791 Daucus carota HOM05D004034 ORTHO05D004210 3.0e-45 187.2 145 65.5
MBI06_g08520_MAGBIO Magnolia biondii HOM05D004034 ORTHO05D004210 6.6e-45 186.0 140 65.0
PGSC0003DMG400021279 Solanum tuberosum HOM05D004034 ORTHO05D004210 6.6e-45 186.0 178 56.2
COL.COLO4_33708 Corchorus olitorius HOM05D004034 ORTHO05D004210 1.1e-44 185.3 141 68.1
DCAR_021304 Daucus carota HOM05D004034 ORTHO05D004210 1.1e-44 185.3 178 56.7
FAN09G1783 Fragaria x ananassa HOM05D004034 ORTHO05D004210 1.5e-44 184.9 180 57.2
Hma1.2p1_0178F.1_g078140 Hydrangea macrophylla HOM05D004034 ORTHO05D004210 1.9e-44 184.5 184 56.0
Potri.008G211800 Populus trichocarpa HOM05D004034 ORTHO05D004210 9.5e-44 182.2 149 63.1
TWI59G0196 Tripterygium wilfordii HOM05D004034 ORTHO05D004210 9.5e-44 182.2 153 62.7
Hma1.2p1_0036F.1_g023770 Hydrangea macrophylla HOM05D004034 ORTHO05D004210 1.2e-43 181.8 145 63.4
Nitab4.5_0002737g0040 Nicotiana tabacum HOM05D004034 ORTHO05D004210 1.6e-43 181.4 143 64.3
Sabra08G0150800 Salix brachista HOM05D004034 ORTHO05D004210 1.6e-43 181.4 149 64.4
CAN.G1191.8 Capsicum annuum HOM05D004034 ORTHO05D004210 2.1e-43 181.0 196 53.6
Manes.02G086800 Manihot esculenta HOM05D004034 ORTHO05D004210 3.6e-43 180.3 194 54.6
Nitab4.5_0001402g0080 Nicotiana tabacum HOM05D004034 ORTHO05D004210 8.1e-43 179.1 145 62.8
PGR042G0629 Punica granatum HOM05D004034 ORTHO05D004210 8.1e-43 179.1 180 56.1
CANSAT64G0821 Cannabis sativa HOM05D004034 ORTHO05D004210 1.1e-42 178.7 181 55.2
Solyc10g007830.1 Solanum lycopersicum HOM05D004034 ORTHO05D004210 1.4e-42 178.3 185 53.0
SHI10563 Sapria himalayana HOM05D004034 ORTHO05D004210 2.3e-42 177.6 164 58.5
AL4G41410 Arabidopsis lyrata HOM05D004034 ORTHO05D004210 3.1e-42 177.2 180 55.6
Nitab4.5_0002027g0120 Nicotiana tabacum HOM05D004034 ORTHO05D000735 3.1e-42 177.2 145 64.1
AT2G42800 Arabidopsis thaliana HOM05D004034 ORTHO05D004210 1.2e-41 175.3 180 55.0
Sopen10g003730 Solanum pennellii HOM05D004034 ORTHO05D004210 1.2e-41 175.3 141 62.4
Carub.0004s2524 Capsella rubella HOM05D004034 ORTHO05D004210 1.5e-41 174.9 181 55.8
Nn6g34427 Nelumbo nucifera HOM05D004034 ORTHO05D004210 2.0e-41 174.5 158 58.9
Nitab4.5_0001121g0120 Nicotiana tabacum HOM05D004034 ORTHO05D004210 4.4e-41 173.3 143 61.5
SGA_v2.0_scaffold9G04896 Striga asiatica HOM05D004034 ORTHO05D004210 5.8e-41 172.9 144 59.7
Thhalv10016617m.g Eutrema salsugineum HOM05D004034 ORTHO05D004210 2.2e-40 171.0 151 60.9
CARHR137880 Cardamine hirsuta HOM05D004034 ORTHO05D004210 2.9e-40 170.6 153 59.5
HPP92_024445 Vanilla planifolia HOM05D004034 ORTHO05D004210 6.4e-40 169.5 434 65.0
THA.LOC104802268 Tarenaya hassleriana HOM05D004034 ORTHO05D004210 8.4e-40 169.1 152 57.2
Sp4g24920 Schrenkiella parvula HOM05D004034 ORTHO05D004210 1.1e-39 168.7 151 60.3
Atru.BG.48.p Acer truncatum HOM05D004034 ORTHO05D004210 1.4e-39 168.3 133 63.9
Migut.M00218 Erythranthe guttata HOM05D004034 ORTHO05D004210 1.9e-39 167.9 382 66.2
HanXRQChr17g0541271 Helianthus annuus HOM05D004034 ORTHO05D004210 1.9e-39 167.9 146 56.8
ATR0213G033 Amborella trichopoda HOM05D004034 ORTHO05D004210 2.4e-39 167.5 144 61.8
Cc05_g09180 Coffea canephora HOM05D004034 ORTHO05D004210 3.2e-39 167.2 168 53.0
Lsat_1_v5_gn_3_36141 Lactuca sativa HOM05D004034 ORTHO05D004210 4.1e-39 166.8 151 57.0
Actinidia11188 Actinidia chinensis HOM05D000176 ORTHO05D000106 5.4e-39 166.4 133 63.2
THA.LOC104824265 Tarenaya hassleriana HOM05D004034 ORTHO05D004210 9.2e-39 165.6 146 58.9
Manes.01G128900 Manihot esculenta HOM05D004034 ORTHO05D004210 1.6e-38 164.9 176 52.3
C04p03880 Brassica napus HOM05D004034 ORTHO05D004210 2.7e-38 164.1 149 60.4
BolC4t22024H Brassica oleracea HOM05D004034 ORTHO05D004210 2.7e-38 164.1 149 60.4
BraA05t19313Z Brassica rapa HOM05D004034 ORTHO05D004210 2.7e-38 164.1 149 60.4
A05p03230 Brassica napus HOM05D004034 ORTHO05D004210 4.6e-38 163.3 149 60.4
Duzib147G0894 Durio zibethinus HOM05D004034 ORTHO05D004210 1.7e-37 161.4 159 54.7
Lj1P586T4 Lonicera japonica HOM05D004034 ORTHO05D004210 8.6e-37 159.1 129 61.2
HanXRQChr06g0170811 Helianthus annuus HOM05D004034 ORTHO05D004210 2.5e-36 157.5 151 53.6
SalBow7G3865 Salvia bowleyana HOM05D000115 ORTHO05D005317 7.3e-36 156.0 147 53.7
ECA246G3925 Erigeron canadensis HOM05D004034 ORTHO05D004210 1.1e-34 152.1 150 54.0
SEGI_14529 Sequoiadendron giganteum HOM05D004034 ORTHO05D004210 2.1e-30 137.9 149 47.7
Zm00001eb353740 Zea mays HOM05D020404 ORTHO05D004210 9.6e-28 129.0 146 50.0
Zm00001eb361880 Zea mays HOM05D004034 ORTHO05D004210 2.8e-27 127.5 128 50.8
Zm00001eb293220 Zea mays HOM05D020404 ORTHO05D004210 2.4e-26 124.4 143 49.0
Os05g0530701 Oryza sativa ssp. japonica HOM05D004034 ORTHO05D004210 6.9e-26 122.9 149 48.3
SMO239G0192 Selaginella moellendorffii HOM05D004034 ORTHO05D004210 9.0e-26 122.5 144 44.4
Actinidia12818 Actinidia chinensis HOM05D004034 ORTHO05D004210 1.2e-25 122.1 89 68.5
Os01g0729400 Oryza sativa ssp. japonica HOM05D004034 ORTHO05D004210 7.6e-25 119.4 140 45.7
SEGI_17016 Sequoiadendron giganteum HOM05D004034 ORTHO05D004210 6.0e-22 109.8 144 39.6
AagrBONN_evm.TU.Sc2ySwM_344.1086 Anthoceros agrestis HOM05D007391 ORTHO05D004210 2.1e-19 101.3 144 36.8
SMO334G0066 Selaginella moellendorffii HOM05D004034 ORTHO05D004210 2.1e-19 101.3 154 39.0
SEGI_17997 Sequoiadendron giganteum HOM05D004034 ORTHO05D004210 1.3e-16 92.0 144 36.1
MD05G1281800 Malus domestica HOM05D004034 ORTHO05D004210 1.1e-15 89.0 177 32.2
FAN11G2584 Fragaria x ananassa HOM05D000945 ORTHO05D000919 1.4e-15 88.6 153 32.7
Prupe.4G082700 Prunus persica HOM05D004034 ORTHO05D004210 1.9e-15 88.2 136 32.4
Rhsim13G0115000 Rhododendron simsii HOM05D004034 ORTHO05D004210 2.4e-15 87.8 150 34.0
Aqoxy5G00193 Aquilegia oxysepala HOM05D006470 ORTHO05D007978 4.2e-15 87.0 190 33.2
CANSAT35G0787 Cannabis sativa HOM05D004034 ORTHO05D004210 4.2e-15 87.0 154 35.1
MBI02_g24301_MAGBIO Magnolia biondii HOM05D004034 ORTHO05D004210 5.5e-15 86.7 143 34.3
TAR627G0269 Trochodendron aralioides HOM05D004034 ORTHO05D004210 5.5e-15 86.7 143 34.3
FvH4_3g05310 Fragaria vesca HOM05D004034 ORTHO05D004210 7.1e-15 86.3 183 31.1
HPP92_014007 Vanilla planifolia HOM05D004034 ORTHO05D004210 1.2e-14 85.5 143 36.4
HPP92_026836 Vanilla planifolia HOM05D004034 ORTHO05D004210 1.2e-14 85.5 143 36.4
SalBow8G0538 Salvia bowleyana HOM05D004034 ORTHO05D004210 2.1e-14 84.7 148 36.5
Ciclev10018342m.g Citrus clementina HOM05D004034 ORTHO05D004210 1.0e-13 82.4 151 32.5
FAN16G3544 Fragaria x ananassa HOM05D004034 ORTHO05D004210 1.0e-13 82.4 153 31.4
FAN25G0927 Fragaria x ananassa HOM05D004034 ORTHO05D004210 1.0e-13 82.4 183 30.6
FAN21G0738 Fragaria x ananassa HOM05D004034 ORTHO05D004210 1.3e-13 82.0 183 30.1
Phvul.006G165901 Phaseolus vulgaris HOM05D004034 ORTHO05D004210 1.3e-13 82.0 138 33.3
Actinidia28383 Actinidia chinensis HOM05D004034 ORTHO05D004210 5.1e-13 80.1 122 45.1
Atru.chr10.1182 Acer truncatum HOM05D004034 ORTHO05D004210 6.7e-13 79.7 149 32.2
SGA_v2.0_scaffold1G00189 Striga asiatica HOM05D004034 ORTHO05D004210 1.1e-12 79.0 149 34.2
TAR362G0775 Trochodendron aralioides HOM05D004034 ORTHO05D004210 1.9e-12 78.2 138 31.2
Cpa.g.sc17.8 Carica papaya HOM05D004034 ORTHO05D004210 2.5e-12 77.8 148 31.8
MELO3C002740.2 Cucumis melo HOM05D004034 ORTHO05D004210 3.3e-12 77.4 146 32.9
Haze_05620 Corylus avellana HOM05D022883 ORTHO05D004210 5.6e-12 76.6 156 34.0
TPR.G26239 Trifolium pratense HOM05D004034 ORTHO05D004210 5.6e-12 76.6 165 30.3
DCAR_003901 Daucus carota HOM05D004034 ORTHO05D004210 7.4e-12 76.3 148 31.8
Duzib192G0084 Durio zibethinus HOM05D004034 ORTHO05D004210 7.4e-12 76.3 154 33.1
COL.COLO4_31043 Corchorus olitorius HOM05D004034 ORTHO05D004210 9.6e-12 75.9 143 32.9
Thecc.06G148400 Theobroma cacao HOM05D004034 ORTHO05D004210 9.6e-12 75.9 143 32.9
Cfa000928 Carpinus fangiana HOM05D000097 ORTHO05D000041 1.3e-11 75.5 156 34.0
CsaV3_1G032380 Cucumis sativus L. HOM05D004034 ORTHO05D004210 1.3e-11 75.5 182 30.2
SalBow6G6709 Salvia bowleyana HOM05D007391 ORTHO05D009446 1.3e-11 75.5 148 35.8
SalBow6G7005 Salvia bowleyana HOM05D007391 ORTHO05D009446 1.6e-11 75.1 148 35.8
Glyma.08G097400 Glycine max HOM05D004034 ORTHO05D004210 2.1e-11 74.7 145 28.3
VMungo0540G0279 Vigna mungo HOM05D004034 ORTHO05D004210 2.8e-11 74.3 138 31.2
Nn8g39512 Nelumbo nucifera HOM05D007391 ORTHO05D009446 6.2e-11 73.2 159 32.1
Duzib235G0027 Durio zibethinus HOM05D004034 ORTHO05D004210 1.8e-10 71.6 148 31.1
Gohir.A10G042000 Gossypium hirsutum HOM05D004034 ORTHO05D004210 1.8e-10 71.6 143 32.2
Gohir.D10G042900 Gossypium hirsutum HOM05D004034 ORTHO05D004210 2.4e-10 71.2 143 31.5
Gorai.011G045500 Gossypium raimondii HOM05D004034 ORTHO05D004210 2.4e-10 71.2 143 31.5
Zm00001eb050480 Zea mays HOM05D004034 ORTHO05D004210 3.1e-10 70.9 182 28.6
Manes.17G071800 Manihot esculenta HOM05D004034 ORTHO05D004210 4.0e-10 70.5 154 31.2
Dinv30607 Davidia involucrata HOM05D007391 ORTHO05D009446 6.9e-10 69.7 157 33.1
Duzib160G0425 Durio zibethinus HOM05D004034 ORTHO05D004210 6.9e-10 69.7 152 29.6
ECA234G1247 Erigeron canadensis HOM05D004034 ORTHO05D004210 6.9e-10 69.7 188 30.3
MELO3C017862.2 Cucumis melo HOM05D007391 ORTHO05D009446 5.8e-09 66.6 141 32.6
CsaV3_4G001720 Cucumis sativus L. HOM05D007391 ORTHO05D009446 5.8e-09 66.6 141 32.6
Duzib235G1403 Durio zibethinus HOM05D007391 ORTHO05D009446 5.8e-09 66.6 152 31.6
Sed0009683 Sechium edule HOM05D007391 ORTHO05D009446 1.0e-08 65.9 143 32.2
Carub.0002s1534 Capsella rubella HOM05D003233 ORTHO05D003694 1.3e-08 65.5 163 30.7
FAN09G3908 Fragaria x ananassa HOM05D007391 ORTHO05D009446 1.3e-08 65.5 159 32.1
FAN14G5578 Fragaria x ananassa HOM05D007391 ORTHO05D009446 1.3e-08 65.5 159 32.1
Migut.D00451 Erythranthe guttata HOM05D006470 ORTHO05D007978 1.7e-08 65.1 168 34.5
Thecc.06G025300 Theobroma cacao HOM05D007391 ORTHO05D009446 2.2e-08 64.7 152 30.9
FAN02G3910 Fragaria x ananassa HOM05D007391 ORTHO05D009446 3.8e-08 63.9 154 32.5
AagrBONN_evm.TU.Sc2ySwM_344.1632 Anthoceros agrestis HOM05D003233 ORTHO05D003694 4.9e-08 63.5 147 31.3
Aqoxy7G03657 Aquilegia oxysepala HOM05D007391 ORTHO05D009446 4.9e-08 63.5 152 31.6
PSO832G0066 Papaver somniferum HOM05D006470 ORTHO05D007978 4.9e-08 63.5 166 30.1
Pp3c24_6450 Physcomitrium patens HOM05D003233 ORTHO05D007978 4.9e-08 63.5 140 32.9
Prupe.3G087800 Prunus persica HOM05D007391 ORTHO05D009446 4.9e-08 63.5 141 31.9
Zm00001eb159500 Zea mays HOM05D007391 ORTHO05D009446 4.9e-08 63.5 148 31.8
PSO210G2696 Papaver somniferum HOM05D006470 ORTHO05D007978 6.5e-08 63.2 168 29.8
CDE02G3387 Ceratophyllum demersum HOM05D006470 ORTHO05D007978 8.4e-08 62.8 148 31.8
FvH4_6g29640 Fragaria vesca HOM05D007391 ORTHO05D009446 8.4e-08 62.8 204 28.4
Ciclev10025464m.g Citrus clementina HOM05D007391 ORTHO05D009446 1.4e-07 62.0 141 31.9
Pp3c23_19100 Physcomitrium patens HOM05D006470 ORTHO05D004210 1.9e-07 61.6 147 32.7
SEGI_23933 Sequoiadendron giganteum HOM05D006470 ORTHO05D007978 1.9e-07 61.6 147 27.9
THA.LOC104821970 Tarenaya hassleriana HOM05D003233 ORTHO05D003694 1.9e-07 61.6 150 30.0
Rhsim08G0212800 Rhododendron simsii HOM05D007391 ORTHO05D009446 2.5e-07 61.2 153 32.0
SGA_v2.0_scaffold117G32353 Striga asiatica HOM05D007391 ORTHO05D009446 2.5e-07 61.2 150 31.3
THA.LOC104812512 Tarenaya hassleriana HOM05D007391 ORTHO05D009446 2.5e-07 61.2 138 31.9
SMO358G0434 Selaginella moellendorffii HOM05D006470 ORTHO05D007978 3.2e-07 60.8 147 28.6
Pp3c8_14320 Physcomitrium patens HOM05D003233 ORTHO05D003694 7.1e-07 59.7 147 32.0
SMO118G0043 Selaginella moellendorffii HOM05D006470 ORTHO05D007978 7.1e-07 59.7 149 29.5
Ah.01g006570 Amaranthus hybridus HOM05D007391 ORTHO05D009446 9.3e-07 59.3 154 29.9
Thhalv10018585m.g Eutrema salsugineum HOM05D003233 ORTHO05D003694 1.6e-06 58.5 150 30.0
Gohir.A07G056500 Gossypium hirsutum HOM05D003233 ORTHO05D003694 3.5e-06 57.4 144 31.9
Gorai.001G064500 Gossypium raimondii HOM05D003233 ORTHO05D003694 3.5e-06 57.4 144 31.9
CARHR061600 Cardamine hirsuta HOM05D003233 ORTHO05D003694 4.6e-06 57.0 193 25.9
arahy.Tifrunner.gnm1.ann1.1PAF21 Arachis hypogaea HOM05D003233 ORTHO05D003694 6.0e-06 56.6 149 30.2
Ciclev10031263m.g Citrus clementina HOM05D003233 ORTHO05D003694 6.0e-06 56.6 148 29.7
SalBow4G0507 Salvia bowleyana HOM05D006470 ORTHO05D007978 6.0e-06 56.6 164 31.7
Hund05775 Selenicereus undatus HOM05D003233 ORTHO05D003694 6.0e-06 56.6 150 30.0
vmacro18998 Vaccinium macrocarpon HOM05D007391 ORTHO05D009446 6.0e-06 56.6 156 30.8
AT1G68780 Arabidopsis thaliana HOM05D003233 ORTHO05D003694 7.9e-06 56.2 150 28.0
arahy.Tifrunner.gnm1.ann1.I1PY21 Arachis hypogaea HOM05D003233 ORTHO05D003694 7.9e-06 56.2 149 30.2
Gohir.D07G060800 Gossypium hirsutum HOM05D003233 ORTHO05D003694 7.9e-06 56.2 144 31.2


User provided reference genes

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