Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 9.3e-125 450.7 309 100.0
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 5.5e-101 371.7 298 88.3
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 2.2e-81 306.6 292 70.5
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 3.2e-77 292.7 290 68.3
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 6.1e-76 288.5 290 65.2
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 7.9e-76 288.1 290 68.3
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 2.3e-75 286.6 293 69.3
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 1.1e-74 284.3 285 73.0
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 6.3e-73 278.5 293 68.6
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 6.3e-73 278.5 293 63.5
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 2.6e-71 273.1 290 68.3
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 6.5e-70 268.5 288 64.9
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 1.9e-69 266.9 317 63.1
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 1.9e-69 266.9 287 66.9
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 5.2e-67 258.8 292 69.2
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 5.2e-67 258.8 292 69.2
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 2.0e-66 256.9 292 67.5
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 3.3e-66 256.1 281 64.1
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 7.5e-66 255.0 290 65.2
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 9.7e-66 254.6 301 48.5
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 2.8e-65 253.1 290 63.8
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 4.5e-63 245.7 290 66.6
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 1.3e-62 244.2 298 68.5
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 3.8e-62 242.7 296 65.9
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 6.5e-62 241.9 290 66.6
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 9.4e-61 238.0 291 46.7
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 2.1e-60 236.9 290 64.1
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 2.7e-60 236.5 294 61.9
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 8.0e-60 235.0 285 63.9
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 8.0e-60 235.0 285 63.9
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 1.0e-59 234.6 291 68.4
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 1.4e-59 234.2 300 60.3
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 1.4e-59 234.2 276 66.7
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 8.8e-59 231.5 285 63.2
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 8.8e-59 231.5 288 68.1
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 1.5e-58 230.7 290 67.9
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 2.0e-58 230.3 292 66.1
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 4.4e-58 229.2 285 62.5
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 5.7e-58 228.8 290 61.0
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 5.7e-58 228.8 291 63.6
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 9.8e-58 228.0 284 62.3
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 1.7e-57 227.3 290 64.5
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 3.7e-57 226.1 290 67.9
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 4.8e-57 225.7 290 60.3
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 6.3e-57 225.3 169 69.8
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 8.3e-57 224.9 354 44.1
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 1.4e-56 224.2 284 62.3
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 1.8e-56 223.8 290 62.8
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 7.0e-56 221.9 284 61.6
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 2.0e-55 220.3 279 61.3
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 3.5e-55 219.5 285 60.0
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 3.5e-55 219.5 288 62.8
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 4.5e-55 219.2 290 63.1
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 5.9e-55 218.8 284 61.6
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 5.9e-55 218.8 288 59.7
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 1.3e-54 217.6 287 62.0
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 8.5e-54 214.9 267 48.3
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 1.1e-53 214.5 294 58.5
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 1.5e-53 214.2 293 58.7
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 3.2e-53 213.0 292 60.3
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 9.4e-53 211.5 290 63.1
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 4.7e-52 209.1 282 61.0
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 6.1e-52 208.8 286 58.7
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 2.0e-50 203.8 286 60.5
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 4.4e-50 202.6 265 68.7
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 7.5e-50 201.8 165 58.2
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 1.3e-49 201.1 313 41.2
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 1.3e-49 201.1 313 41.2
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 2.2e-49 200.3 325 38.5
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 1.1e-48 198.0 283 60.4
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 9.2e-48 194.9 218 69.3
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 5.9e-47 192.2 166 61.4
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 1.9e-45 187.2 285 57.5
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 1.2e-44 184.5 218 68.3
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 2.1e-44 183.7 285 63.9
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 6.1e-44 182.2 292 56.2
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 8.0e-44 181.8 139 62.6
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 1.0e-43 181.4 294 58.5
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 1.0e-43 181.4 294 58.5
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 6.8e-43 178.7 252 68.3
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 1.2e-42 177.9 141 61.0
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 1.5e-42 177.6 292 52.7
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 1.5e-42 177.6 292 57.5
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 2.0e-42 177.2 145 62.1
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 6.4e-41 172.2 288 53.1
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.8e-40 170.6 291 41.2
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 2.4e-40 170.2 215 65.1
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 2.4e-40 170.2 141 61.7
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 3.2e-40 169.9 288 56.9
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 2.7e-39 166.8 141 59.6
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 6.6e-38 162.2 140 56.4
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 2.5e-37 160.2 290 54.1
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 5.4e-32 142.5 229 57.2
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 1.2e-31 141.4 143 53.1
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 1.6e-28 131.0 289 43.3
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 1.4e-27 127.9 234 52.1
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 8.9e-27 125.2 240 54.6
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 6.4e-25 119.0 209 56.9
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 3.2e-24 116.7 209 56.9
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.2e-23 114.8 153 51.6
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 1.6e-23 114.4 239 54.8
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 7.8e-23 112.1 278 40.6
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 1.2e-18 98.2 65 69.2
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 1.7e-17 94.4 143 39.2
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 4.1e-16 89.7 209 37.8
AUR62015309 Chenopodium quinoa HOM05D007176 ORTHO05D009050 6.6e-14 82.4 58 67.2
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 1.9e-13 80.9 83 47.0
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 2.5e-13 80.5 196 32.1
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 6.2e-12 75.9 217 26.7
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 2.9e-09 67.0 57 57.9
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 2.1e-07 60.8 156 40.4
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 6.0e-07 59.3 156 39.7


User provided reference genes

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