Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 0.0e+00 1340.9 696 100.0
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 0.0e+00 1318.1 696 97.1
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 0.0e+00 1090.1 698 80.8
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 0.0e+00 1078.9 696 81.6
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 3.5e-305 1051.2 697 77.6
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.0e-304 1049.7 692 78.0
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 3.9e-304 1047.7 694 78.0
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 1.5e-303 1045.8 698 78.1
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 1.4e-301 1039.3 694 76.7
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 3.1e-301 1038.1 694 77.2
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 2.0e-300 1035.4 702 75.6
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 2.6e-300 1035.0 696 76.3
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 3.7e-299 1031.2 695 77.6
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 8.3e-299 1030.0 694 76.8
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 7.8e-297 1023.5 695 75.7
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 5.0e-296 1020.8 695 75.5
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 1.1e-295 1019.6 697 75.8
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 2.5e-295 1018.5 692 76.2
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 3.3e-295 1018.1 692 75.4
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 1.6e-294 1015.8 693 75.9
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 6.2e-294 1013.8 699 75.4
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 1.4e-293 1012.7 695 75.1
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 1.4e-293 1012.7 745 71.7
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 5.2e-293 1010.7 696 75.6
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 2.6e-292 1008.4 695 75.5
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 9.9e-292 1006.5 696 75.1
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 1.3e-291 1006.1 697 75.2
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 1.7e-291 1005.7 696 74.3
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 8.3e-291 1003.4 732 73.0
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 8.3e-291 1003.4 695 74.7
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 1.4e-290 1002.7 694 75.1
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 2.4e-290 1001.9 692 75.1
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 2.4e-290 1001.9 695 75.4
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 5.4e-290 1000.7 694 75.9
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 9.2e-290 1000.0 693 75.8
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 1.2e-289 999.6 695 74.2
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 1.2e-289 999.6 694 75.5
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 2.7e-289 998.4 694 75.4
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 2.7e-289 998.4 696 75.1
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 3.5e-289 998.0 692 74.3
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 1.3e-288 996.1 698 73.5
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 1.7e-288 995.7 692 74.6
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 6.6e-288 993.8 692 75.3
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.1e-287 993.0 692 74.7
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.2e-286 989.6 692 74.4
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 1.6e-286 989.2 699 73.7
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 2.8e-286 988.4 699 73.5
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 4.7e-286 987.6 695 73.4
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 6.2e-286 987.3 694 74.6
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 1.4e-285 986.1 697 73.3
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 8.9e-285 983.4 696 73.1
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 3.4e-284 981.5 694 73.3
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 3.4e-284 981.5 695 74.0
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 5.8e-284 980.7 742 69.9
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 3.8e-283 978.0 678 75.2
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 6.4e-283 977.2 698 72.1
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 8.4e-283 976.9 694 74.6
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 5.4e-282 974.2 699 73.0
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 2.1e-281 972.2 726 70.0
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 3.5e-281 971.5 801 65.3
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 6.0e-281 970.7 696 73.0
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 7.8e-281 970.3 707 72.1
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 2.3e-280 968.8 699 72.5
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 3.0e-280 968.4 699 72.5
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 1.9e-279 965.7 694 72.2
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 3.3e-279 964.9 694 72.3
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 1.4e-277 959.5 694 71.8
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 9.0e-277 956.8 695 71.8
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 1.2e-276 956.4 695 71.4
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.2e-276 956.4 695 71.8
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 2.6e-276 955.3 694 71.2
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 2.6e-276 955.3 694 71.2
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 9.9e-276 953.4 694 71.0
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 9.9e-276 953.4 694 71.0
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 1.7e-275 952.6 694 71.2
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 3.2e-274 948.3 652 75.3
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 2.7e-273 945.3 694 70.7
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 2.3e-272 942.2 696 71.1
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 3.0e-272 941.8 699 71.4
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 1.1e-271 939.9 694 70.2
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 3.3e-271 938.3 692 70.8
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 1.3e-270 936.4 706 69.4
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 1.2e-265 919.8 699 69.7
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 3.3e-263 911.8 696 68.7
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 1.5e-255 886.3 693 67.0
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 1.1e-247 860.1 1200 45.6
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 3.3e-247 858.6 555 79.5
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 5.3e-245 851.3 695 65.9
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 1.9e-242 842.8 570 76.8
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 1.2e-241 840.1 721 62.6
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 6.3e-230 801.2 781 58.6
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 3.1e-229 798.9 721 59.4
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 6.3e-222 774.6 541 75.2
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 4.8e-214 748.4 470 80.4
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 2.7e-204 716.1 644 59.0
MD13G1243800 Malus domestica HOM05D001176 ORTHO05D007019 1.2e-201 707.2 521 70.2
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 3.4e-199 699.1 696 55.0
PGSC0003DMG400001956 Solanum tuberosum HOM05D001176 ORTHO05D007019 7.5e-199 698.0 517 70.6
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 1.2e-188 664.1 415 80.5
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 8.2e-137 491.9 715 41.1
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 8.7e-131 471.9 713 40.5
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 2.7e-124 450.3 714 39.1
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 1.1e-120 438.3 264 85.2
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.7e-118 431.0 694 42.8
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 6.5e-118 429.1 695 41.9
CBR_g61503 Chara braunii HOM05D001176 ORTHO05D007019 5.3e-112 409.5 476 48.3
Dinv41809 Davidia involucrata HOM05D001176 ORTHO05D007019 8.0e-108 395.6 277 75.8
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 2.4e-104 384.0 661 41.5
CSS0030107 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 2.2e-102 377.5 232 79.7
Cc07_g20650 Coffea canephora HOM05D001176 ORTHO05D007019 1.9e-93 347.8 433 52.0
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 4.4e-90 336.7 682 36.8
MD13G1243900 Malus domestica HOM05D001176 ORTHO05D007019 4.3e-77 293.5 249 63.1
vmacro00085 Vaccinium macrocarpon HOM05D001176 ORTHO05D007019 1.0e-75 288.9 297 57.2
FAN15G2248 Fragaria x ananassa HOM05D001176 ORTHO05D007019 4.4e-66 256.9 224 62.5
Hund16023 Selenicereus undatus HOM05D001176 ORTHO05D007019 1.9e-64 251.5 198 69.2
CBR_g61501 Chara braunii HOM05D001176 ORTHO05D007019 6.0e-63 246.5 167 71.9
arahy.Tifrunner.gnm1.ann1.7XHH75 Arachis hypogaea HOM05D001176 ORTHO05D007019 2.8e-44 184.5 136 75.0
arahy.Tifrunner.gnm1.ann1.V0K3WG Arachis hypogaea HOM05D001176 ORTHO05D007019 2.8e-44 184.5 136 75.0
Glyma.01G154501 Glycine max HOM05D001176 ORTHO05D007019 2.5e-37 161.4 102 77.5
Glyma.01G154450 Glycine max HOM05D001176 ORTHO05D007019 2.1e-36 158.3 118 73.7
Os03g0225600 Oryza sativa ssp. japonica HOM05D001176 ORTHO05D007019 1.4e-27 129.0 116 53.4
HPP92_018762 Vanilla planifolia HOM05D001176 ORTHO05D007019 3.2e-24 117.9 87 63.2
CsaV3_4G027980 Cucumis sativus L. HOM05D001176 ORTHO05D007019 3.4e-18 97.8 217 36.9
Zm00001eb399610 Zea mays HOM05D001176 ORTHO05D007019 4.2e-16 90.9 151 38.4
TPR.G11479 Trifolium pratense HOM05D001176 ORTHO05D007019 2.7e-15 88.2 63 73.0
Glyma.01G154551 Glycine max HOM05D001176 ORTHO05D214389 1.8e-11 75.5 76 64.5


User provided reference genes

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