Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7384 Papaver somniferum HOM05D006400 ORTHO05D008039 5.6e-84 314.3 166 100.0
PSO541G3795 Papaver somniferum HOM05D006400 ORTHO05D008039 2.9e-40 169.1 113 80.5
Lj3C13G5 Lonicera japonica HOM05D006400 ORTHO05D008039 2.7e-14 82.8 128 41.4
TAR628G0558 Trochodendron aralioides HOM05D006400 ORTHO05D008039 6.1e-14 81.6 135 40.0
Aqoxy3G01604 Aquilegia oxysepala HOM05D006400 ORTHO05D008039 7.9e-14 81.3 108 44.4
Hma1.2p1_1196F.1_g266040 Hydrangea macrophylla HOM05D006400 ORTHO05D008039 1.5e-12 77.0 125 39.2
TAR628G0792 Trochodendron aralioides HOM05D006400 ORTHO05D008039 1.5e-12 77.0 130 35.4
Gohir.A02G148300 Gossypium hirsutum HOM05D006400 ORTHO05D008039 7.4e-12 74.7 132 36.4
Gorai.007G029300 Gossypium raimondii HOM05D006400 ORTHO05D008039 1.3e-11 73.9 127 36.2
Lalb_Chr09g0323451 Lupinus albus HOM05D006400 ORTHO05D008039 1.3e-11 73.9 126 34.9
DCAR_028626 Daucus carota HOM05D006400 ORTHO05D008039 1.7e-11 73.6 125 38.4
Gohir.D03G032200 Gossypium hirsutum HOM05D006400 ORTHO05D008039 1.7e-11 73.6 132 35.6
Gorai.003G033700 Gossypium raimondii HOM05D006400 ORTHO05D008039 1.7e-11 73.6 132 35.6
Medtr4g021220 Medicago truncatula HOM05D006400 ORTHO05D008039 2.8e-11 72.8 121 36.4
Nitab4.5_0007283g0050 Nicotiana tabacum HOM05D006400 ORTHO05D008039 4.8e-11 72.0 136 33.8
Oeu052953.1 Olea europaea HOM05D006400 ORTHO05D008039 4.8e-11 72.0 111 36.9
RcHm_v2.0_Chr7g0204361 Rosa chinensis HOM05D006400 ORTHO05D008039 4.8e-11 72.0 127 33.9
Ca_22891_v3 Cicer arietinum L. HOM05D006400 ORTHO05D008039 6.3e-11 71.6 130 31.5
Gohir.D11G026800 Gossypium hirsutum HOM05D006400 ORTHO05D008039 6.3e-11 71.6 127 35.4
Phvul.011G001300 Phaseolus vulgaris HOM05D006400 ORTHO05D008039 6.3e-11 71.6 130 32.3
Nitab4.5_0002601g0010 Nicotiana tabacum HOM05D006400 ORTHO05D008039 8.2e-11 71.2 136 33.8
Dinv25846 Davidia involucrata HOM05D006400 ORTHO05D008039 1.1e-10 70.9 109 42.2
MBI10_g34776_MAGBIO Magnolia biondii HOM05D000931 ORTHO05D001924 1.8e-10 70.1 106 41.5
Duzib068G0402 Durio zibethinus HOM05D006400 ORTHO05D008039 3.1e-10 69.3 88 43.2
MD04G1061400 Malus domestica HOM05D006400 ORTHO05D008039 3.1e-10 69.3 93 40.9
FAN08G3355 Fragaria x ananassa HOM05D006400 ORTHO05D008039 4.1e-10 68.9 108 37.0
Glyma.08G238900 Glycine max HOM05D006400 ORTHO05D008039 4.1e-10 68.9 130 33.1
Gorai.005G166300 Gossypium raimondii HOM05D006400 ORTHO05D008039 4.1e-10 68.9 118 37.3
Solyc08g078280.1 Solanum lycopersicum HOM05D006400 ORTHO05D008039 4.1e-10 68.9 133 33.8
CSS0025678 Camellia sinensis var. sinensis HOM05D006400 ORTHO05D008039 5.3e-10 68.6 93 46.2
FAN13G1818 Fragaria x ananassa HOM05D006400 ORTHO05D008039 6.9e-10 68.2 103 37.9
Peaxi162Scf00017g03140 Petunia axillaris HOM05D006400 ORTHO05D008039 9.1e-10 67.8 99 40.4
Gohir.D02G148280 Gossypium hirsutum HOM05D006400 ORTHO05D008039 1.2e-09 67.4 112 35.7
HanXRQChr17g0533241 Helianthus annuus HOM05D006400 ORTHO05D008039 1.2e-09 67.4 102 37.3
Lj3g0022967 Lotus japonicus HOM05D006400 ORTHO05D008039 1.2e-09 67.4 123 31.7
Prupe.4G276000 Prunus persica HOM05D006400 ORTHO05D008039 1.2e-09 67.4 123 31.7
CAN.G1312.18 Capsicum annuum HOM05D006400 ORTHO05D008039 1.5e-09 67.0 156 29.5
GSVIVG01007151001 Vitis vinifera HOM05D006400 ORTHO05D008039 1.5e-09 67.0 98 40.8
Haze_02836 Corylus avellana HOM05D006400 ORTHO05D008039 2.0e-09 66.6 124 33.1
Gohir.A11G027600 Gossypium hirsutum HOM05D006400 ORTHO05D008039 2.0e-09 66.6 127 34.6
VMungo1127G0679 Vigna mungo HOM05D006400 ORTHO05D008039 2.0e-09 66.6 129 32.6
Peaxi162Scf00346g00056 Petunia axillaris HOM05D006400 ORTHO05D008039 2.6e-09 66.2 128 34.4
Sabra01G0124300 Salix brachista HOM05D006400 ORTHO05D008039 2.6e-09 66.2 130 32.3
Sabra01G0124400 Salix brachista HOM05D006400 ORTHO05D008039 2.6e-09 66.2 130 32.3
Sabra01G0124500 Salix brachista HOM05D006400 ORTHO05D008039 2.6e-09 66.2 130 32.3
TPR.G5570 Trifolium pratense HOM05D006400 ORTHO05D008039 2.6e-09 66.2 110 31.8
FAN18G2780 Fragaria x ananassa HOM05D006400 ORTHO05D008039 3.4e-09 65.9 103 36.9
Potri.001G154901 Populus trichocarpa HOM05D006400 ORTHO05D008039 3.4e-09 65.9 130 31.5
EL10Ac5g12550 Beta vulgaris HOM05D006400 ORTHO05D008039 4.5e-09 65.5 111 36.9
FvH4_5g19630 Fragaria vesca HOM05D006400 ORTHO05D008039 4.5e-09 65.5 103 35.9
Manes.02G042000 Manihot esculenta HOM05D006400 ORTHO05D008039 4.5e-09 65.5 104 38.5
MD06G1055200 Malus domestica HOM05D006400 ORTHO05D008039 5.9e-09 65.1 107 35.5
Sc01g0008230 Simmondsia chinensis HOM05D006400 ORTHO05D008039 7.7e-09 64.7 132 32.6
Thecc.03G246700 Theobroma cacao HOM05D006400 ORTHO05D008039 7.7e-09 64.7 88 39.8
Glyma.15G265000 Glycine max HOM05D006400 ORTHO05D008039 1.0e-08 64.3 130 33.1
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.7e-08 63.5 106 35.8
THA.LOC104810088 Tarenaya hassleriana HOM05D006400 ORTHO05D008039 2.2e-08 63.2 107 39.3
vmacro00015 Vaccinium macrocarpon HOM05D006400 ORTHO05D008039 2.2e-08 63.2 104 38.5
arahy.Tifrunner.gnm1.ann1.S7MQ4D Arachis hypogaea HOM05D006400 ORTHO05D008039 2.9e-08 62.8 131 29.0
AL8G10680 Arabidopsis lyrata HOM05D006400 ORTHO05D008039 5.0e-08 62.0 104 32.7
CiPaw.16G085600 Carya illinoinensis HOM05D006400 ORTHO05D008039 5.0e-08 62.0 91 38.5
COL.COLO4_37104 Corchorus olitorius HOM05D006400 ORTHO05D008039 6.5e-08 61.6 89 38.2
Aqoxy6G02102 Aquilegia oxysepala HOM05D006400 ORTHO05D008039 8.5e-08 61.2 123 32.5
AT5G47360 Arabidopsis thaliana HOM05D006400 ORTHO05D008039 8.5e-08 61.2 104 32.7
Ah.01g005640 Amaranthus hybridus HOM05D006400 ORTHO05D008039 1.1e-07 60.8 116 34.5
SHI09587 Sapria himalayana HOM05D006400 ORTHO05D008039 1.1e-07 60.8 114 35.1
CANSAT25G0610 Cannabis sativa HOM05D006400 ORTHO05D008039 1.4e-07 60.5 64 43.8
ClCG06G010030 Citrullus lanatus HOM05D006400 ORTHO05D008039 1.4e-07 60.5 92 35.9
Migut.N02973 Erythranthe guttata HOM05D006400 ORTHO05D008039 1.9e-07 60.1 130 32.3
Manes.14G149022 Manihot esculenta HOM05D006400 ORTHO05D008039 1.9e-07 60.1 130 30.8
AUR62018329 Chenopodium quinoa HOM05D006400 ORTHO05D008039 2.5e-07 59.7 111 33.3
Cc08_g12000 Coffea canephora HOM05D006400 ORTHO05D008039 2.5e-07 59.7 99 38.4
Gohir.A03G125450 Gossypium hirsutum HOM05D006400 ORTHO05D008039 2.5e-07 59.7 112 35.7
Nitab4.5_0010304g0010 Nicotiana tabacum HOM05D006400 ORTHO05D008039 2.5e-07 59.7 115 33.9
Sopen08g026780 Solanum pennellii HOM05D006400 ORTHO05D008039 2.5e-07 59.7 94 37.2
Cpa.g.sc89.62 Carica papaya HOM05D006400 ORTHO05D008039 3.2e-07 59.3 56 50.0
Ciclev10019985m.g Citrus clementina HOM05D006400 ORTHO05D008039 3.2e-07 59.3 83 39.8
MSTRG.24505 Avicennia marina HOM05D006400 ORTHO05D008039 4.2e-07 58.9 107 35.5
PGSC0003DMG400039297 Solanum tuberosum HOM05D006400 ORTHO05D008039 4.2e-07 58.9 94 36.2
VMungo0251G3116 Vigna mungo HOM05D006400 ORTHO05D008039 5.5e-07 58.5 122 30.3
DCAR_009350 Daucus carota HOM05D006400 ORTHO05D008039 7.2e-07 58.2 125 32.0
QL09p046276 Quercus lobata HOM05D006400 ORTHO05D008039 7.2e-07 58.2 88 36.4
AUR62035872 Chenopodium quinoa HOM05D000268 ORTHO05D008039 1.2e-06 57.4 111 31.5
MELO3C008512.2 Cucumis melo HOM05D006400 ORTHO05D008039 1.2e-06 57.4 91 34.1
Sed0010566 Sechium edule HOM05D006400 ORTHO05D008039 1.2e-06 57.4 100 37.0
Carub.0008s0042 Capsella rubella HOM05D006400 ORTHO05D008039 1.6e-06 57.0 104 31.7
TWI15G0916 Tripterygium wilfordii HOM05D006400 ORTHO05D008039 1.6e-06 57.0 91 35.2
Zm00001eb009290 Zea mays HOM05D006400 ORTHO05D008039 1.6e-06 57.0 114 27.2
CsaV3_2G011310 Cucumis sativus L. HOM05D006400 ORTHO05D008039 2.7e-06 56.2 92 33.7
Sp2g12080 Schrenkiella parvula HOM05D006400 ORTHO05D008039 2.7e-06 56.2 115 33.9
AUR62035870 Chenopodium quinoa HOM05D006400 ORTHO05D008039 3.6e-06 55.8 111 31.5
CARHR174040 Cardamine hirsuta HOM05D006400 ORTHO05D008039 4.7e-06 55.5 127 26.8
C07p31010 Brassica napus HOM05D006400 ORTHO05D008039 7.9e-06 54.7 108 30.6


User provided reference genes

Program Settings