Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7373 Papaver somniferum HOM05D001186 ORTHO05D000971 4.3e-88 328.6 249 100.0
PSO541G6297 Papaver somniferum HOM05D001186 ORTHO05D000971 1.9e-75 286.6 226 93.8
Aqoxy3G00278 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 9.1e-22 108.2 205 51.7
TAR629G3519 Trochodendron aralioides HOM05D001186 ORTHO05D000971 2.7e-18 96.7 199 43.7
MBI09_g40766_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 6.7e-17 92.0 195 45.6
Nn4g23866 Nelumbo nucifera HOM05D001186 ORTHO05D000971 3.3e-16 89.7 205 54.6
TAR371G0320 Trochodendron aralioides HOM05D001186 ORTHO05D000971 3.3e-16 89.7 199 37.2
Manes.14G103400 Manihot esculenta HOM05D001186 ORTHO05D000971 7.4e-16 88.6 228 40.8
Manes.06G067000 Manihot esculenta HOM05D001186 ORTHO05D000971 8.2e-15 85.1 190 35.8
Dinv31630 Davidia involucrata HOM05D001186 ORTHO05D000971 2.4e-14 83.6 190 35.8
QL10p025510 Quercus lobata HOM05D001186 ORTHO05D000971 2.4e-14 83.6 205 36.1
Haze_18687 Corylus avellana HOM05D001186 ORTHO05D000971 4.1e-14 82.8 201 39.3
Hma1.2p1_0653F.1_g196240 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 4.1e-14 82.8 198 47.0
Dinv28111 Davidia involucrata HOM05D001186 ORTHO05D000971 7.0e-14 82.0 207 40.1
CSS0012233 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 1.2e-13 81.3 215 40.0
Thecc.02G227800 Theobroma cacao HOM05D001186 ORTHO05D000971 1.6e-13 80.9 200 32.0
CiPaw.15G086400 Carya illinoinensis HOM05D001186 ORTHO05D000971 2.0e-13 80.5 200 34.0
Potri.012G055900 Populus trichocarpa HOM05D001186 ORTHO05D000971 2.6e-13 80.1 210 40.5
Duzib268G0437 Durio zibethinus HOM05D001186 ORTHO05D000971 3.5e-13 79.7 211 32.2
MD16G1041600 Malus domestica HOM05D001186 ORTHO05D000971 3.5e-13 79.7 221 35.7
ATR1125G102 Amborella trichopoda HOM05D001186 ORTHO05D000971 7.7e-13 78.6 219 34.7
Cpa.g.c39771 Carica papaya HOM05D001186 ORTHO05D000971 7.7e-13 78.6 206 48.5
Cc11_g10020 Coffea canephora HOM05D001186 ORTHO05D000971 7.7e-13 78.6 175 34.3
Manes.01G010900 Manihot esculenta HOM05D001186 ORTHO05D000971 1.0e-12 78.2 194 51.0
Cpa.g.sc3.505 Carica papaya HOM05D001186 ORTHO05D000971 1.3e-12 77.8 201 47.3
Nn3g17865 Nelumbo nucifera HOM05D001186 ORTHO05D000971 1.3e-12 77.8 109 73.4
Haze_17495 Corylus avellana HOM05D001186 ORTHO05D000971 1.7e-12 77.4 204 44.6
COL.COLO4_07638 Corchorus olitorius HOM05D001186 ORTHO05D000971 2.9e-12 76.6 198 34.3
Potri.010G123700 Populus trichocarpa HOM05D001186 ORTHO05D000971 2.9e-12 76.6 201 37.3
MSTRG.847 Avicennia marina HOM05D001186 ORTHO05D000971 3.8e-12 76.3 211 33.2
CiPaw.15G086500 Carya illinoinensis HOM05D001186 ORTHO05D000971 3.8e-12 76.3 176 33.0
QL01p041179 Quercus lobata HOM05D001186 ORTHO05D000971 3.8e-12 76.3 103 44.7
CsaV3_1G003880 Cucumis sativus L. HOM05D001406 ORTHO05D002467 5.0e-12 75.9 186 61.3
Potri.015G046600 Populus trichocarpa HOM05D001186 ORTHO05D000971 5.0e-12 75.9 199 33.7
Sabra10G0093700 Salix brachista HOM05D001186 ORTHO05D000971 5.0e-12 75.9 211 45.5
CSS0040830 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 6.5e-12 75.5 201 36.8
PGR142G3041 Punica granatum HOM05D001186 ORTHO05D000971 6.5e-12 75.5 165 36.4
MELO3C010713.2 Cucumis melo HOM05D001186 ORTHO05D000971 1.5e-11 74.3 191 44.0
QL01p041163 Quercus lobata HOM05D001186 ORTHO05D000971 1.5e-11 74.3 205 32.7
VMungo0464G1252 Vigna mungo HOM05D001186 ORTHO05D000971 1.9e-11 73.9 82 62.2
Cpa.g.c35103 Carica papaya HOM05D001186 ORTHO05D000971 2.5e-11 73.6 160 48.8
Glyma.07G092500 Glycine max HOM05D001186 ORTHO05D000971 2.5e-11 73.6 198 36.4
Sabra12G0039700 Salix brachista HOM05D001186 ORTHO05D000971 2.5e-11 73.6 106 51.9
FAN07G0491 Fragaria x ananassa HOM05D001186 ORTHO05D000971 3.2e-11 73.2 187 32.6
Cfa019761 Carpinus fangiana HOM05D001186 ORTHO05D000971 4.2e-11 72.8 198 40.9
Migut.L01057 Erythranthe guttata HOM05D001186 ORTHO05D000971 5.5e-11 72.4 115 40.0
Dinv15684 Davidia involucrata HOM05D012236 ORTHO05D001602 7.2e-11 72.0 86 73.3
FAN12G0246 Fragaria x ananassa HOM05D001186 ORTHO05D000971 7.2e-11 72.0 194 32.0
FAN12G0708 Fragaria x ananassa HOM05D001186 ORTHO05D000971 7.2e-11 72.0 194 32.0
Gohir.A05G321500 Gossypium hirsutum HOM05D001186 ORTHO05D000971 7.2e-11 72.0 97 58.8
Gohir.D05G323700 Gossypium hirsutum HOM05D001186 ORTHO05D000971 7.2e-11 72.0 81 67.9
FvH4_4g27220 Fragaria vesca HOM05D001186 ORTHO05D000971 1.2e-10 71.2 188 33.0
Gorai.009G347500 Gossypium raimondii HOM05D001186 ORTHO05D000971 1.6e-10 70.9 91 61.5
Sabra15G0039100 Salix brachista HOM05D001186 ORTHO05D000971 1.6e-10 70.9 193 34.7
Sed0003786 Sechium edule HOM05D001186 ORTHO05D000971 1.6e-10 70.9 206 43.2
TWI31G0680 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 1.6e-10 70.9 93 46.2
Atru.chr11.114 Acer truncatum HOM05D001186 ORTHO05D000971 2.1e-10 70.5 189 39.2
AT3G18360 Arabidopsis thaliana HOM05D001186 ORTHO05D000971 2.1e-10 70.5 101 41.6
Dinv21073 Davidia involucrata HOM05D001186 ORTHO05D000971 2.1e-10 70.5 130 36.9
PGR119G2222 Punica granatum HOM05D001186 ORTHO05D000971 2.7e-10 70.1 223 33.2
Carub.0003s1814 Capsella rubella HOM05D001186 ORTHO05D000971 3.6e-10 69.7 111 47.7
TPR.G15166 Trifolium pratense HOM05D001186 ORTHO05D000971 3.6e-10 69.7 84 78.6
ClCG06G014760 Citrullus lanatus HOM05D001186 ORTHO05D000971 6.1e-10 68.9 208 49.5
RcHm_v2.0_Chr4g0435011 Rosa chinensis HOM05D001186 ORTHO05D000971 6.1e-10 68.9 217 32.7
MELO3C017312.2 Cucumis melo HOM05D001186 ORTHO05D000971 8.0e-10 68.6 209 54.5
FAN08G3585 Fragaria x ananassa HOM05D001186 ORTHO05D000971 8.0e-10 68.6 89 77.5
FAN17G0570 Fragaria x ananassa HOM05D001186 ORTHO05D000971 8.0e-10 68.6 216 31.9
Gohir.A08G093800 Gossypium hirsutum HOM05D001186 ORTHO05D000971 8.0e-10 68.6 212 34.0
Oeu008243.1 Olea europaea HOM05D001186 ORTHO05D000971 8.0e-10 68.6 115 41.7
Rhsim08G0133100 Rhododendron simsii HOM05D001186 ORTHO05D000971 8.0e-10 68.6 83 48.2
CAN.G423.13 Capsicum annuum HOM05D001926 ORTHO05D000971 1.0e-09 68.2 85 63.5
DCAR_023208 Daucus carota HOM05D001186 ORTHO05D000971 1.4e-09 67.8 207 30.4
FAN04G0269 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.4e-09 67.8 80 85.0
Medtr6g084200 Medicago truncatula HOM05D001186 ORTHO05D000971 1.4e-09 67.8 99 69.7
COL.COLO4_32831 Corchorus olitorius HOM05D001186 ORTHO05D000971 1.8e-09 67.4 39 79.5
FAN13G2378 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.8e-09 67.4 202 54.5
Glyma.09G183700 Glycine max HOM05D001186 ORTHO05D000971 1.8e-09 67.4 104 52.9
Gorai.004G112000 Gossypium raimondii HOM05D001186 ORTHO05D000971 1.8e-09 67.4 212 33.0
CiPaw.16G065400 Carya illinoinensis HOM05D001186 ORTHO05D000971 2.3e-09 67.0 203 32.5
Migut.J00487 Erythranthe guttata HOM05D001186 ORTHO05D000971 2.3e-09 67.0 94 55.3
Peaxi162Scf00015g00106 Petunia axillaris HOM05D001186 ORTHO05D000971 2.3e-09 67.0 41 75.6
TWI79G1623 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 2.3e-09 67.0 94 42.6
HPP92_004813 Vanilla planifolia HOM05D001186 ORTHO05D000971 2.3e-09 67.0 34 88.2
Aa31LG8G5190 Aethionema arabicum HOM05D001186 ORTHO05D000971 3.0e-09 66.6 102 44.1
CANSAT01G1945 Cannabis sativa HOM05D001186 ORTHO05D000971 3.0e-09 66.6 81 48.1
Ca_25487_v3 Cicer arietinum L. HOM05D001186 ORTHO05D000971 3.0e-09 66.6 101 56.4
Ciclev10023791m.g Citrus clementina HOM05D001186 ORTHO05D000971 3.0e-09 66.6 177 32.8
CsaV3_2G025160 Cucumis sativus L. HOM05D001186 ORTHO05D000971 3.0e-09 66.6 37 78.4
FvH4_5g11980 Fragaria vesca HOM05D001186 ORTHO05D000971 3.0e-09 66.6 108 68.5
Cpa.g.sc1.29 Carica papaya HOM05D001186 ORTHO05D000971 4.0e-09 66.2 88 45.5
Gohir.D08G105100 Gossypium hirsutum HOM05D001186 ORTHO05D000971 4.0e-09 66.2 212 33.0
FAN22G0160 Fragaria x ananassa HOM05D001186 ORTHO05D000971 5.2e-09 65.9 195 31.8
Hma1.2p1_0061F.1_g033760 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 5.2e-09 65.9 89 52.8
Lalb_Chr04g0254691 Lupinus albus HOM05D001186 ORTHO05D000971 5.2e-09 65.9 214 28.5
AL3G31640 Arabidopsis lyrata HOM05D001186 ORTHO05D000971 6.7e-09 65.5 79 44.3
Lsat_1_v5_gn_8_40921 Lactuca sativa HOM05D001186 ORTHO05D000971 6.7e-09 65.5 176 30.7
Oeu034232.1 Olea europaea HOM05D001186 ORTHO05D000971 6.7e-09 65.5 176 40.3
unitig_22.g6558 Utricularia gibba HOM05D001186 ORTHO05D000971 6.7e-09 65.5 171 31.0
Rhsim03G0008700 Rhododendron simsii HOM05D001186 ORTHO05D000971 8.8e-09 65.1 85 67.1
FAN18G1152 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.2e-08 64.7 108 67.6
Nitab4.5_0000489g0090 Nicotiana tabacum HOM05D001186 ORTHO05D000971 1.2e-08 64.7 173 31.2
Oeu001004.1 Olea europaea HOM05D001186 ORTHO05D000971 1.2e-08 64.7 199 41.7
Phvul.004G156300 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 1.2e-08 64.7 36 80.6
SalBow8G5321 Salvia bowleyana HOM05D001186 ORTHO05D000971 1.2e-08 64.7 82 43.9
SGA_v2.0_scaffold38G14938 Striga asiatica HOM05D001186 ORTHO05D000971 1.2e-08 64.7 85 44.7
A01p35980 Brassica napus HOM05D001186 ORTHO05D000971 1.5e-08 64.3 96 41.7
CARHR093710 Cardamine hirsuta HOM05D001186 ORTHO05D000971 1.5e-08 64.3 80 50.0
ECA233G1982 Erigeron canadensis HOM05D001186 ORTHO05D000971 1.5e-08 64.3 223 28.7
FAN18G4498 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.5e-08 64.3 109 67.0
Glyma.08G041900 Glycine max HOM05D001186 ORTHO05D000971 1.5e-08 64.3 82 47.6
BcaC09g48794 Brassica carinata HOM05D001186 ORTHO05D000971 2.0e-08 63.9 96 41.7
C01p45850 Brassica napus HOM05D001186 ORTHO05D000971 2.0e-08 63.9 96 41.7
BolC1t04547H Brassica oleracea HOM05D001186 ORTHO05D000971 2.0e-08 63.9 96 41.7
BraA01t03679Z Brassica rapa HOM05D001186 ORTHO05D000971 2.0e-08 63.9 96 41.7
CAN.G1425.4 Capsicum annuum HOM05D001186 ORTHO05D000971 2.6e-08 63.5 76 50.0
Lalb_Chr21g0308871 Lupinus albus HOM05D001186 ORTHO05D000971 2.6e-08 63.5 218 30.7
THA.LOC104806066 Tarenaya hassleriana HOM05D001186 ORTHO05D000971 2.6e-08 63.5 35 82.9
TWI81G0318 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 2.6e-08 63.5 36 86.1
HanXRQChr12g0364621 Helianthus annuus HOM05D001186 ORTHO05D000971 3.3e-08 63.2 105 38.1
Lalb_Chr22g0353121 Lupinus albus HOM05D001186 ORTHO05D000971 4.4e-08 62.8 149 34.2
Sp3g16470 Schrenkiella parvula HOM05D001186 ORTHO05D000971 4.4e-08 62.8 105 48.6
arahy.Tifrunner.gnm1.ann1.MZ5XB8 Arachis hypogaea HOM05D001186 ORTHO05D000971 5.7e-08 62.4 87 42.5
CDE06G0770 Ceratophyllum demersum HOM05D001186 ORTHO05D000971 7.5e-08 62.0 94 39.4
Duzib205G0230 Durio zibethinus HOM05D001186 ORTHO05D000971 7.5e-08 62.0 206 37.4
Psat1g034720 Pisum sativum HOM05D001186 ORTHO05D000971 7.5e-08 62.0 41 65.9
TPR.G18807 Trifolium pratense HOM05D001186 ORTHO05D000971 7.5e-08 62.0 170 31.8
CAN.G1425.6 Capsicum annuum HOM05D001186 ORTHO05D000971 9.7e-08 61.6 88 45.5
EL10Ac5g11455 Beta vulgaris HOM05D001186 ORTHO05D000971 1.3e-07 61.2 58 55.2
HanXRQChr12g0364631 Helianthus annuus HOM05D001186 ORTHO05D000971 1.3e-07 61.2 182 29.7
Prupe.5G222000 Prunus persica HOM05D001186 ORTHO05D000971 1.7e-07 60.8 146 32.2
Sed0016046 Sechium edule HOM05D001186 ORTHO05D000971 1.7e-07 60.8 32 87.5
Eucgr.G02312 Eucalyptus grandis HOM05D001186 ORTHO05D000971 2.2e-07 60.5 160 32.5
Lj2g0018313 Lotus japonicus HOM05D001186 ORTHO05D000971 2.2e-07 60.5 86 40.7
Thecc.03G036500 Theobroma cacao HOM05D001186 ORTHO05D000971 2.8e-07 60.1 154 48.1
Duzib084G0272 Durio zibethinus HOM05D001186 ORTHO05D000971 3.7e-07 59.7 197 38.6
Nitab4.5_0001674g0050 Nicotiana tabacum HOM05D001186 ORTHO05D000971 3.7e-07 59.7 81 46.9
Lalb_Chr16g0387891 Lupinus albus HOM05D001186 ORTHO05D000971 6.3e-07 58.9 46 58.7
Nitab4.5_0002906g0010 Nicotiana tabacum HOM05D001186 ORTHO05D000971 6.3e-07 58.9 85 42.4
Phvul.007G028200 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 6.3e-07 58.9 187 29.4
Rhsim09G0107000 Rhododendron simsii HOM05D001186 ORTHO05D000971 6.3e-07 58.9 158 27.2
PGSC0003DMG401028780 Solanum tuberosum HOM05D001186 ORTHO05D000971 6.3e-07 58.9 76 82.9
ECA238G3992 Erigeron canadensis HOM05D001186 ORTHO05D000971 8.2e-07 58.5 43 67.4
Thhalv10022101m.g Eutrema salsugineum HOM05D001186 ORTHO05D000971 8.2e-07 58.5 106 38.7
PGSC0003DMG400005637 Solanum tuberosum HOM05D001186 ORTHO05D000971 8.2e-07 58.5 83 44.6
ATR0772G190 Amborella trichopoda HOM05D001186 ORTHO05D000971 1.1e-06 58.2 94 40.4
Lj2g0004597 Lotus japonicus HOM05D001186 ORTHO05D000971 1.1e-06 58.2 203 42.9
Lalb_Chr06g0166031 Lupinus albus HOM05D001186 ORTHO05D000971 1.1e-06 58.2 82 42.7
Oeu046984.1 Olea europaea HOM05D001186 ORTHO05D000971 1.1e-06 58.2 78 46.2
AT1G68450 Arabidopsis thaliana HOM05D001186 ORTHO05D000971 1.4e-06 57.8 107 37.4
CSS0032299 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 1.4e-06 57.8 174 29.3
Glyma.10G273300 Glycine max HOM05D001186 ORTHO05D000971 1.4e-06 57.8 214 28.0
Lsat_1_v5_gn_2_14741 Lactuca sativa HOM05D001186 ORTHO05D000971 1.4e-06 57.8 58 58.6
Lj5g0015241 Lotus japonicus HOM05D001186 ORTHO05D000971 1.4e-06 57.8 78 43.6
BcaB03g14273 Brassica carinata HOM05D001186 ORTHO05D000971 1.8e-06 57.4 76 43.4
BcaC06g34871 Brassica carinata HOM05D001186 ORTHO05D000971 1.8e-06 57.4 80 42.5
BolC7t42762H Brassica oleracea HOM05D001626 ORTHO05D001563 1.8e-06 57.4 80 42.5
FAN15G3153 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.8e-06 57.4 114 36.8
Prupe.1G312500 Prunus persica HOM05D001186 ORTHO05D000971 1.8e-06 57.4 212 41.5
A07p15190 Brassica napus HOM05D001186 ORTHO05D000971 2.4e-06 57.0 80 42.5
BraA07t29260Z Brassica rapa HOM05D001626 ORTHO05D001563 2.4e-06 57.0 80 42.5
Sed0028138 Sechium edule HOM05D001186 ORTHO05D000971 2.4e-06 57.0 84 40.5
Solyc06g069100.3 Solanum lycopersicum HOM05D000010 ORTHO05D000302 2.4e-06 57.0 30 90.0
BcaB06g25879 Brassica carinata HOM05D001186 ORTHO05D000971 3.1e-06 56.6 56 51.8
C07p22310 Brassica napus HOM05D001186 ORTHO05D000971 3.1e-06 56.6 76 43.4
Pp3c5_24370 Physcomitrium patens HOM05D001186 ORTHO05D000971 3.1e-06 56.6 83 39.8
VMungo1215G0327 Vigna mungo HOM05D001186 ORTHO05D000971 3.1e-06 56.6 187 28.3
Ciclev10023693m.g Citrus clementina HOM05D001186 ORTHO05D000971 4.1e-06 56.2 133 33.8
Phvul.008G159700 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 4.1e-06 56.2 86 39.5
Solyc03g119410.1 Solanum lycopersicum HOM05D001186 ORTHO05D000971 4.1e-06 56.2 83 43.4
arahy.Tifrunner.gnm1.ann1.407XUT Arachis hypogaea HOM05D001186 ORTHO05D000971 5.3e-06 55.8 89 50.6
arahy.Tifrunner.gnm1.ann1.6A166J Arachis hypogaea HOM05D001186 ORTHO05D000971 5.3e-06 55.8 88 51.1
ClCG05G022640 Citrullus lanatus HOM05D001186 ORTHO05D000971 5.3e-06 55.8 32 75.0
Cfa018343 Carpinus fangiana HOM05D001186 ORTHO05D000971 7.0e-06 55.5 78 42.3
CiPaw.15G131400 Carya illinoinensis HOM05D001186 ORTHO05D000971 7.0e-06 55.5 202 50.5
Haze_17728 Corylus avellana HOM05D001186 ORTHO05D000971 7.0e-06 55.5 78 42.3
Glyma.20G116600 Glycine max HOM05D001186 ORTHO05D000971 7.0e-06 55.5 167 30.5
HPP92_004812 Vanilla planifolia HOM05D001186 ORTHO05D000971 7.0e-06 55.5 85 55.3
Carub.0002s1496 Capsella rubella HOM05D001186 ORTHO05D000971 9.1e-06 55.1 29 86.2
CARHR061230 Cardamine hirsuta HOM05D001186 ORTHO05D000971 9.1e-06 55.1 29 86.2
Glyma.14G124800 Glycine max HOM05D001186 ORTHO05D000971 9.1e-06 55.1 78 42.3
Psat6g226600 Pisum sativum HOM05D001186 ORTHO05D000971 9.1e-06 55.1 130 33.1


User provided reference genes

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