Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 4.4e-178 627.9 324 100.0
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 1.5e-149 533.1 318 88.1
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 1.3e-73 280.8 336 49.1
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.0e-65 254.6 361 45.2
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 1.1e-64 251.1 338 46.7
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.1e-59 234.6 333 45.6
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 5.4e-59 232.3 357 43.7
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 2.1e-58 230.3 328 44.5
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.0e-57 228.0 348 44.0
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 6.6e-57 225.3 322 46.3
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 5.8e-53 212.2 323 43.3
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 3.8e-52 209.5 343 41.4
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 8.4e-52 208.4 324 42.6
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 4.2e-51 206.1 333 42.3
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 4.2e-51 206.1 324 40.7
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 9.3e-51 204.9 346 41.0
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 1.2e-50 204.5 329 41.6
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 1.2e-50 204.5 335 41.5
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.7e-50 203.4 346 40.8
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 3.5e-50 203.0 323 42.4
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 7.8e-50 201.8 335 42.4
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 2.3e-49 200.3 318 41.5
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 8.7e-49 198.4 325 40.3
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 1.5e-48 197.6 329 40.1
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 1.9e-48 197.2 325 42.5
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 4.3e-48 196.1 329 41.3
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 4.3e-48 196.1 373 38.6
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 1.3e-47 194.5 389 35.7
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.6e-47 194.1 346 38.7
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 2.1e-47 193.7 329 39.2
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 2.8e-47 193.4 318 42.5
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 3.6e-47 193.0 329 40.1
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 4.8e-47 192.6 320 40.0
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 6.2e-47 192.2 327 40.1
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.8e-46 190.7 327 39.8
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 2.4e-46 190.3 305 40.0
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 2.4e-46 190.3 305 42.6
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 3.1e-46 189.9 341 37.0
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 4.0e-46 189.5 389 35.2
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 5.3e-46 189.1 383 36.3
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.6e-45 186.8 318 40.3
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 4.5e-45 186.0 318 39.9
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 7.6e-45 185.3 330 40.0
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 9.9e-45 184.9 332 38.6
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.3e-44 184.5 287 41.5
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.9e-43 180.6 331 40.8
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 4.2e-43 179.5 282 41.5
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 7.1e-43 178.7 294 39.8
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.0e-41 174.9 284 41.2
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 1.3e-41 174.5 330 38.2
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.8e-41 174.1 310 35.8
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 3.9e-41 172.9 331 37.8
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 1.5e-40 171.0 330 36.7
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.5e-40 171.0 372 34.9
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 3.3e-40 169.9 385 35.6
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 5.6e-40 169.1 241 43.2
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 5.6e-40 169.1 363 36.4
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.3e-39 167.9 370 35.7
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 3.7e-39 166.4 337 36.5
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 4.8e-39 166.0 372 35.5
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 8.1e-39 165.2 361 36.8
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 8.1e-39 165.2 372 36.3
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 1.1e-38 164.9 297 38.4
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.1e-38 164.9 319 37.9
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 1.1e-38 164.9 383 34.5
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.2e-37 161.4 307 41.4
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.5e-37 161.0 376 34.6
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.5e-37 161.0 298 38.6
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 2.0e-37 160.6 302 39.1
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 1.7e-36 157.5 330 39.1
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 3.8e-36 156.4 330 38.2
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 8.4e-36 155.2 258 41.1
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.1e-35 154.8 314 36.0
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.4e-35 154.5 367 35.4
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 4.2e-35 152.9 381 33.3
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 4.2e-35 152.9 415 31.8
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 2.7e-34 150.2 360 35.0
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 4.6e-34 149.4 258 40.3
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 4.6e-34 149.4 258 40.3
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 1.8e-33 147.5 340 34.4
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 3.9e-33 146.4 375 33.6
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 6.7e-33 145.6 316 34.5
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 6.7e-33 145.6 367 31.9
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 6.7e-33 145.6 333 33.3
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 6.7e-33 145.6 420 32.1
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 3.3e-32 143.3 363 31.4
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 7.4e-32 142.1 391 33.8
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 2.1e-31 140.6 395 32.7
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 6.2e-31 139.0 414 30.0
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.1e-30 136.7 373 33.2
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 6.9e-30 135.6 414 30.0
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 9.0e-30 135.2 292 35.3
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 3.4e-29 133.3 396 31.8
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 3.4e-29 133.3 209 42.6
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 3.4e-29 133.3 240 38.3
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 5.8e-29 132.5 338 32.2
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 7.6e-29 132.1 320 32.8
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 1.7e-28 131.0 349 31.8
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 8.4e-28 128.6 318 33.3
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.9e-27 127.5 202 38.6
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 2.1e-26 124.0 336 31.8
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.0e-25 120.2 340 30.0
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 3.9e-25 119.8 379 32.2
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 6.7e-25 119.0 260 36.9
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 8.7e-25 118.6 313 32.6
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 5.7e-24 115.9 260 37.3
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 1.1e-22 111.7 174 42.0
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 1.4e-22 111.3 277 31.8
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.2e-20 104.0 165 40.6
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 2.9e-20 103.6 205 36.6
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 1.1e-19 101.7 265 30.9
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 1.9e-19 100.9 282 30.1
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.1e-14 85.1 169 36.1
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 5.0e-12 76.3 100 45.0
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 8.8e-09 65.5 60 53.3
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 7.0e-06 55.8 132 37.1


User provided reference genes

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