Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 1.4e-139 499.6 248 100.0
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 6.5e-137 490.7 248 98.4
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.1e-125 453.4 249 87.1
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 3.3e-125 451.8 249 87.1
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 4.4e-125 451.4 249 85.9
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 6.3e-124 447.6 248 85.5
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 9.1e-123 443.7 260 83.5
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.5e-122 443.0 248 84.7
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.5e-122 443.0 248 84.7
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 1.5e-122 443.0 248 84.3
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 2.0e-122 442.6 249 83.9
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 3.4e-122 441.8 248 84.7
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 5.9e-122 441.0 255 84.3
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 1.0e-121 440.3 250 85.2
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 1.0e-121 440.3 250 85.2
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 6.5e-121 437.6 249 83.5
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 6.5e-121 437.6 250 83.2
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 8.5e-121 437.2 250 82.8
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.5e-120 435.6 249 82.7
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.5e-120 435.6 249 82.7
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 2.5e-120 435.6 251 82.5
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 2.5e-120 435.6 250 82.4
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 5.5e-120 434.5 249 82.7
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 7.2e-120 434.1 275 76.7
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 7.2e-120 434.1 250 82.8
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 1.6e-119 433.0 251 82.5
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 1.6e-119 433.0 251 82.5
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 1.6e-119 433.0 250 83.6
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 1.6e-119 433.0 250 82.0
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 1.6e-119 433.0 250 81.6
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 4.7e-119 431.4 249 82.7
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 4.7e-119 431.4 249 82.7
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 4.7e-119 431.4 249 82.7
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 8.0e-119 430.6 249 82.3
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 8.0e-119 430.6 249 82.3
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.0e-118 430.3 248 81.9
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 1.0e-118 430.3 249 82.3
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 1.8e-118 429.5 249 81.9
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 2.3e-118 429.1 249 81.9
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 3.0e-118 428.7 251 82.5
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 3.0e-118 428.7 249 82.7
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 3.9e-118 428.3 249 82.7
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 3.9e-118 428.3 250 82.0
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 3.9e-118 428.3 249 82.7
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 5.2e-118 427.9 251 80.9
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 5.2e-118 427.9 249 82.7
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 5.2e-118 427.9 249 81.9
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 6.7e-118 427.6 249 82.3
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 1.5e-117 426.4 250 81.6
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 2.0e-117 426.0 248 82.7
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 5.7e-117 424.5 249 81.1
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 2.2e-116 422.5 249 80.7
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 2.2e-116 422.5 249 80.7
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 2.2e-116 422.5 253 80.6
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 2.8e-116 422.2 249 80.7
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 2.8e-116 422.2 254 80.3
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 4.8e-116 421.4 250 79.6
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 4.8e-116 421.4 252 80.6
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 4.8e-116 421.4 253 79.8
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 4.8e-116 421.4 249 80.3
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 4.8e-116 421.4 249 80.7
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 4.8e-116 421.4 254 79.9
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 4.8e-116 421.4 249 80.7
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 8.2e-116 420.6 249 79.1
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 1.1e-115 420.2 249 80.3
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 1.1e-115 420.2 276 75.0
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.4e-115 419.9 249 80.7
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 1.8e-115 419.5 251 80.5
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 1.8e-115 419.5 249 81.1
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 3.1e-115 418.7 252 80.6
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 1.2e-114 416.8 252 80.2
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.6e-114 416.4 271 76.0
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 2.0e-114 416.0 234 84.2
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 4.5e-114 414.8 255 79.2
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 5.9e-114 414.5 250 78.4
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 1.3e-113 413.3 247 78.5
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 1.1e-112 410.2 249 78.7
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 5.5e-112 407.9 290 71.0
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 7.2e-112 407.5 247 76.5
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 1.0e-110 403.7 252 79.0
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 3.0e-110 402.1 252 78.6
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 2.6e-109 399.1 222 84.2
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 5.7e-109 397.9 222 84.7
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 5.7e-109 397.9 231 83.1
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 5.7e-109 397.9 231 83.1
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 4.8e-108 394.8 247 74.9
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 1.8e-107 392.9 247 78.1
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 7.0e-107 391.0 249 76.7
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 5.0e-105 384.8 254 75.6
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.1e-104 383.6 248 76.2
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 5.2e-102 374.8 251 72.5
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 5.7e-101 371.3 249 74.7
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 3.7e-100 368.6 221 78.3
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 1.8e-99 366.3 248 70.6
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 7.0e-99 364.4 251 69.3
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 2.0e-98 362.8 208 84.6
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 2.0e-98 362.8 449 47.0
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.5e-98 362.1 250 72.8
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 5.0e-97 358.2 251 72.9
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 3.3e-96 355.5 219 78.5
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 3.6e-95 352.1 234 70.5
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 1.0e-94 350.5 279 65.9
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 1.8e-94 349.7 211 79.6
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 5.2e-94 348.2 247 68.0
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 8.9e-94 347.4 249 71.9
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.6e-93 345.9 253 71.1
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 6.3e-92 341.3 207 78.7
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 4.5e-90 335.1 190 84.2
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 8.6e-89 330.9 268 64.9
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 2.5e-88 329.3 248 67.3
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 3.3e-88 328.9 242 68.2
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 1.0e-86 323.9 195 79.0
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 1.7e-84 316.6 249 65.9
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 5.4e-83 311.6 249 61.0
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 2.3e-81 306.2 277 61.7
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 6.8e-78 294.7 202 72.8
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 2.0e-77 293.1 208 70.2
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 2.6e-77 292.7 335 52.8
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 4.1e-75 285.4 207 69.1
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 5.4e-75 285.0 157 86.6
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 7.0e-75 284.6 248 62.1
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 6.6e-73 278.1 249 53.8
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 3.1e-70 269.2 157 79.6
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 1.3e-68 263.8 228 54.4
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 1.3e-65 253.8 230 53.9
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 3.0e-65 252.7 170 72.4
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 1.1e-64 250.8 283 50.5
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.9e-60 236.1 141 83.0
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 4.2e-59 232.3 145 74.5
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 1.6e-58 230.3 157 72.6
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 2.1e-58 229.9 206 58.7
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.8e-46 190.3 116 77.6
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 7.6e-45 184.9 115 77.4
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 3.7e-39 166.0 129 68.2
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 9.9e-37 157.9 91 79.1
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 2.5e-35 153.3 95 71.6
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 4.3e-32 142.5 174 47.7
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.6e-31 140.6 248 40.7
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-29 133.3 94 70.2
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.3e-15 87.8 51 78.4


User provided reference genes

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