Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 1.7e-175 619.4 346 100.0
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 4.6e-165 584.7 346 95.4
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.9e-86 323.6 360 60.8
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.1e-85 320.1 358 62.3
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 3.6e-85 319.3 357 57.4
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.4e-81 307.4 372 55.9
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 1.7e-74 283.9 375 52.0
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 3.2e-73 279.6 369 56.1
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 1.1e-70 271.2 370 53.2
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 3.3e-70 269.6 380 50.8
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.6e-69 267.3 380 51.8
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 2.1e-69 266.9 377 49.9
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 2.1e-69 266.9 368 51.1
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 2.8e-69 266.5 381 54.1
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 8.1e-69 265.0 372 54.6
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 1.1e-68 264.6 381 52.5
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 2.3e-68 263.5 379 53.0
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.2e-67 261.2 360 49.7
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 1.2e-67 261.2 374 53.5
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 1.2e-67 261.2 384 51.3
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 1.5e-67 260.8 372 54.0
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 2.0e-67 260.4 378 54.2
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 2.6e-67 260.0 355 54.4
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 9.9e-67 258.1 371 53.4
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 9.9e-67 258.1 378 53.7
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 1.3e-66 257.7 382 51.6
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 8.3e-66 255.0 402 49.3
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 1.1e-65 254.6 387 49.4
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.1e-65 254.6 375 50.4
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 3.2e-65 253.1 372 51.6
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 5.4e-65 252.3 360 53.1
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.3e-63 247.7 370 51.4
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.3e-63 246.9 385 52.5
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 3.9e-63 246.1 379 49.1
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 3.9e-63 246.1 370 53.0
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 6.6e-63 245.4 389 51.4
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 2.5e-62 243.4 361 50.1
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 3.3e-62 243.0 376 52.7
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 4.3e-62 242.7 374 51.1
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 1.2e-61 241.1 373 50.9
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.6e-61 240.7 380 49.5
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 3.6e-61 239.6 356 48.0
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.8e-60 237.3 374 48.9
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 8.9e-60 235.0 366 48.6
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 1.2e-59 234.6 371 45.8
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.2e-59 234.6 364 50.5
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.5e-59 234.2 365 52.1
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.4e-59 233.0 372 46.8
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 5.8e-59 232.3 371 50.1
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 2.9e-58 229.9 371 51.2
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 2.9e-58 229.9 377 50.9
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 2.9e-58 229.9 374 48.9
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 3.8e-58 229.6 380 45.8
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 4.9e-58 229.2 383 50.1
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 6.4e-58 228.8 372 51.3
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 6.4e-58 228.8 366 50.5
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 1.4e-57 227.6 362 48.9
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 2.4e-57 226.9 446 42.4
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 5.4e-57 225.7 368 47.0
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 5.4e-57 225.7 378 49.2
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 7.1e-57 225.3 384 49.2
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.0e-55 221.5 382 49.2
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 5.1e-55 219.2 384 49.0
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 8.7e-55 218.4 371 46.9
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 1.9e-54 217.2 387 48.3
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.9e-54 217.2 363 43.0
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 2.5e-54 216.9 377 49.1
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 2.5e-54 216.9 365 49.0
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.2e-53 214.5 361 51.5
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 8.1e-53 211.8 371 45.6
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 8.1e-53 211.8 377 45.6
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 1.1e-52 211.5 365 45.2
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 2.4e-52 210.3 367 49.9
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 4.0e-52 209.5 339 49.6
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 5.3e-52 209.1 375 48.0
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 2.0e-51 207.2 364 43.7
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.6e-51 206.8 371 45.3
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 2.6e-51 206.8 364 50.5
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 4.4e-51 206.1 377 45.1
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 4.4e-51 206.1 374 43.9
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 7.6e-51 205.3 363 48.8
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.3e-50 204.5 371 48.2
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.3e-50 204.5 363 48.8
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.2e-50 203.8 362 48.9
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 8.4e-50 201.8 306 52.9
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 1.1e-49 201.4 349 47.6
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 1.1e-49 201.4 366 48.1
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 3.2e-49 199.9 321 50.5
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 7.1e-49 198.7 341 46.6
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 1.6e-48 197.6 361 45.7
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 1.6e-48 197.6 341 48.4
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.7e-48 196.8 374 43.9
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 2.7e-48 196.8 345 43.8
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 2.7e-48 196.8 375 42.4
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 3.5e-48 196.4 359 44.8
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 3.0e-47 193.4 355 44.2
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 3.0e-47 193.4 345 48.4
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 1.3e-45 188.0 364 45.9
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.6e-45 186.4 450 37.8
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 6.2e-45 185.7 366 45.1
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 6.2e-45 185.7 326 46.9
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 8.1e-45 185.3 359 39.8
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 8.1e-45 185.3 355 45.4
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 1.1e-44 184.9 364 41.8
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 1.1e-44 184.9 370 45.9
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 6.9e-44 182.2 360 43.3
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 2.6e-43 180.3 374 43.9
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 4.5e-43 179.5 379 41.2
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.8e-42 176.4 287 49.5
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 6.4e-42 175.6 384 44.5
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 1.9e-41 174.1 359 45.7
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 9.3e-41 171.8 362 45.0
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.2e-40 171.4 321 45.2
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 1.6e-40 171.0 365 44.4
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 2.1e-40 170.6 362 41.7
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 2.7e-40 170.2 370 42.4
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 4.6e-40 169.5 359 44.0
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 1.0e-39 168.3 359 42.3
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 1.3e-39 167.9 359 41.5
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.8e-39 167.5 319 44.8
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 1.8e-39 167.5 349 41.8
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 3.0e-39 166.8 343 41.1
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 5.1e-39 166.0 255 47.5
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 1.1e-38 164.9 351 42.5
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 2.5e-38 163.7 338 37.6
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 3.3e-38 163.3 334 42.2
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 9.6e-38 161.8 356 41.9
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.3e-37 161.4 332 39.8
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 2.8e-37 160.2 372 36.3
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 3.7e-37 159.8 384 41.4
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 4.8e-37 159.5 389 38.8
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 8.1e-37 158.7 356 39.9
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 1.4e-36 157.9 340 39.7
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 4.0e-36 156.4 369 41.5
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 9.0e-36 155.2 329 44.7
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 1.5e-35 154.5 359 37.6
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 7.1e-33 145.6 329 39.8
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.6e-32 144.4 361 35.7
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 5.1e-31 139.4 160 57.5
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 6.7e-31 139.0 357 40.1
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 7.4e-30 135.6 294 40.5
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 2.1e-29 134.0 311 38.6
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 1.4e-28 131.3 259 45.2
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 4.5e-27 126.3 347 35.7
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 1.1e-25 121.7 362 34.3
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.4e-25 121.3 231 43.7
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 9.3e-25 118.6 339 38.1
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 2.7e-24 117.1 207 43.0
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 4.3e-22 109.8 197 45.2
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 1.6e-21 107.8 260 40.8
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 2.2e-21 107.5 307 33.6
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 1.2e-19 101.7 253 41.1
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.5e-19 101.3 216 42.6
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 5.9e-19 99.4 126 55.6
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 1.0e-18 98.6 358 32.4
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 3.8e-18 96.7 305 32.8
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.4e-17 94.7 207 42.0
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 1.9e-17 94.4 305 32.5
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 2.5e-17 94.0 259 37.1
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 1.2e-16 91.7 234 37.6
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 1.2e-16 91.7 234 37.6
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.1e-16 90.9 320 38.1
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.1e-16 90.9 320 38.1
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 1.0e-15 88.6 206 40.8
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 1.0e-15 88.6 206 40.8
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.8e-15 87.8 345 35.4
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 6.7e-15 85.9 244 38.1
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 6.7e-15 85.9 132 47.7
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 8.8e-15 85.5 121 52.9
Nn1g06616 Nelumbo nucifera HOM05D003676 ORTHO05D004262 4.8e-13 79.7 115 53.9
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 8.2e-13 79.0 299 32.1
SMO340G0107 Selaginella moellendorffii HOM05D003676 ORTHO05D004262 7.7e-11 72.4 330 30.0
Pp3c2_17070 Physcomitrium patens HOM05D032375 ORTHO05D030105 5.0e-10 69.7 102 42.2
Nn8g38913 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.4e-09 68.2 65 52.3
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 3.6e-08 63.5 424 28.5
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.4e-07 61.6 58 60.3
Gorai.006G262100 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.0e-07 60.5 58 58.6
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 5.1e-07 59.7 107 42.1
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 5.7e-06 56.2 337 30.0


User provided reference genes

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