Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 6.6e-204 713.8 350 100.0
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 2.2e-199 698.7 349 97.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 7.5e-147 524.2 331 74.3
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 9.1e-145 517.3 332 74.7
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.5e-144 515.4 331 76.4
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 3.8e-143 511.9 317 78.5
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 8.5e-143 510.8 333 73.3
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 1.5e-142 510.0 332 72.9
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 2.1e-141 506.1 333 72.7
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 8.0e-141 504.2 337 70.0
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.0e-140 503.8 331 72.8
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.4e-140 503.4 337 70.0
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 1.8e-140 503.1 331 73.1
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 5.2e-140 501.5 334 72.5
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.2e-140 501.5 337 69.7
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 6.8e-140 501.1 331 71.6
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.4e-139 498.8 337 69.1
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 5.7e-139 498.0 331 71.6
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 2.8e-138 495.7 323 73.1
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.8e-137 493.0 322 72.7
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.4e-137 492.7 325 72.3
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 5.4e-137 491.5 332 69.3
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.6e-136 490.0 337 70.0
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 1.6e-136 490.0 320 72.8
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.7e-136 489.2 325 69.8
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.7e-136 489.2 309 76.1
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 3.5e-136 488.8 333 71.8
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.5e-136 488.4 333 70.0
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 7.7e-136 487.6 327 70.6
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 3.8e-135 485.3 332 68.7
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 5.0e-135 485.0 334 69.5
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 5.0e-135 485.0 324 71.9
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 8.6e-135 484.2 331 70.1
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 2.5e-134 482.6 331 71.6
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 4.2e-134 481.9 332 68.7
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 9.5e-134 480.7 331 70.1
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 2.1e-133 479.6 327 70.0
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 2.1e-133 479.6 330 70.6
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 2.8e-133 479.2 330 71.5
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 2.8e-133 479.2 330 72.7
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.3e-132 476.1 331 70.4
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.0e-132 475.7 331 70.1
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 3.0e-132 475.7 333 69.1
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 4.0e-132 475.3 332 67.2
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.0e-131 473.0 321 70.4
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.3e-130 470.3 336 66.7
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.7e-130 469.9 321 68.5
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 6.3e-130 468.0 333 66.4
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 8.3e-130 467.6 318 68.9
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.8e-129 466.5 331 68.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 5.4e-129 464.9 332 66.3
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.2e-128 463.8 324 67.6
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.6e-128 463.4 319 68.0
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.6e-128 463.4 321 69.2
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 2.7e-128 462.6 323 69.7
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 2.7e-128 462.6 323 69.7
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 2.7e-128 462.6 323 69.7
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 4.5e-128 461.8 333 67.9
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 4.5e-128 461.8 331 66.5
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.0e-127 460.7 323 69.3
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.0e-127 460.7 323 69.3
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.0e-127 460.7 331 66.2
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.0e-127 460.7 328 67.4
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.7e-127 459.9 323 69.0
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.8e-127 458.8 334 67.1
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 6.6e-127 458.0 324 68.8
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.1e-126 457.2 338 66.9
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.5e-126 456.8 310 70.3
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.9e-126 456.4 324 68.2
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 4.3e-126 455.3 339 65.8
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.5e-126 454.1 331 66.2
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.2e-125 453.8 322 68.6
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.6e-125 453.4 324 67.3
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.6e-125 453.4 331 65.9
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 2.8e-125 452.6 317 69.1
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.8e-125 452.6 331 65.9
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.4e-124 450.3 332 67.2
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.3e-124 449.5 325 67.7
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.9e-124 447.6 331 65.6
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.0e-123 446.4 316 70.3
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 2.4e-121 439.5 328 63.7
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 4.6e-120 435.3 332 63.9
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.7e-119 433.3 316 64.9
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.7e-119 433.3 330 68.2
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.6e-117 426.8 318 64.5
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 8.9e-116 421.0 333 62.2
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.5e-110 403.7 318 61.0
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 8.3e-106 387.9 332 58.4
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 6.0e-104 381.7 307 60.9
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.9e-102 376.7 318 59.7
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 5.6e-102 375.2 282 67.0
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 5.2e-100 368.6 310 57.7
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.2e-99 367.5 318 58.5
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.2e-90 336.7 203 80.8
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.9e-89 333.6 255 65.9
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.3e-85 320.9 309 55.0
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 2.6e-83 313.2 318 50.3
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.7e-82 310.5 306 51.6
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 6.4e-82 308.5 215 70.7
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.9e-74 283.1 203 67.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 7.1e-65 251.9 201 59.7
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.6e-64 250.8 165 70.9
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.7e-64 250.0 155 78.1
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.2e-61 240.4 177 63.3
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.3e-55 220.3 131 77.9
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.5e-54 216.9 256 48.4
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.1e-52 209.9 157 66.2
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.2e-51 208.0 284 44.7
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.9e-49 200.7 150 64.7
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.1e-46 191.4 130 70.8
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.5e-42 175.6 163 56.4
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 1.0e-34 151.8 86 80.2
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.6e-30 137.1 133 51.9
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.7e-22 109.4 107 45.8
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.0e-19 100.9 72 69.4
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.2e-16 91.7 175 36.0
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 9.8e-14 82.0 250 26.8
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 4.5e-11 73.2 175 29.1
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 3.1e-07 60.5 158 29.1
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 2.6e-06 57.4 244 26.6


User provided reference genes

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