Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 4.0e-72 274.6 136 100.0
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 2.8e-49 198.7 103 97.1
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 2.2e-25 119.4 127 52.0
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 3.7e-25 118.6 132 49.2
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 9.0e-24 114.0 131 48.9
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 9.0e-24 114.0 138 45.7
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 6.5e-22 107.8 137 43.1
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 1.1e-21 107.1 141 44.7
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 1.4e-21 106.7 129 46.5
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 2.5e-21 105.9 141 45.4
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 3.2e-21 105.5 138 43.5
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 7.2e-21 104.4 138 42.0
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 1.2e-20 103.6 140 42.1
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 1.6e-20 103.2 131 48.9
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 6.1e-20 101.3 138 45.7
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 6.1e-20 101.3 128 46.1
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 1.4e-19 100.1 135 44.4
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 1.4e-19 100.1 133 42.9
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 2.3e-19 99.4 142 45.1
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 3.0e-19 99.0 138 42.8
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 3.0e-19 99.0 126 47.6
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 3.0e-19 99.0 134 47.0
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 3.9e-19 98.6 138 43.5
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 3.9e-19 98.6 125 44.0
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 6.7e-19 97.8 126 44.4
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 6.7e-19 97.8 128 47.7
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 1.1e-18 97.1 140 42.9
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 1.1e-18 97.1 130 43.8
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.1e-18 97.1 142 44.4
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 1.5e-18 96.7 131 42.0
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 1.9e-18 96.3 141 43.3
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 1.9e-18 96.3 137 41.6
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 4.3e-18 95.1 137 40.9
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 5.7e-18 94.7 138 44.2
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 7.4e-18 94.4 128 45.3
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 9.7e-18 94.0 139 42.4
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 9.7e-18 94.0 127 45.7
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 1.7e-17 93.2 136 43.4
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 2.2e-17 92.8 137 40.1
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.8e-17 92.4 144 43.8
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.8e-17 92.4 144 43.1
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.8e-17 92.4 144 43.1
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.8e-17 92.4 131 43.5
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 2.8e-17 92.4 125 48.8
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 3.7e-17 92.0 125 43.2
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 4.8e-17 91.7 138 41.3
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 6.3e-17 91.3 139 42.4
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 6.3e-17 91.3 123 43.9
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 8.2e-17 90.9 123 48.0
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 8.2e-17 90.9 137 42.3
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 1.1e-16 90.5 136 42.6
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 1.8e-16 89.7 124 43.5
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 1.8e-16 89.7 120 47.5
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 2.4e-16 89.4 124 43.5
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 3.1e-16 89.0 135 42.2
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 4.1e-16 88.6 124 46.0
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 5.3e-16 88.2 136 41.2
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 9.1e-16 87.4 145 40.7
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 9.1e-16 87.4 142 40.8
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 1.2e-15 87.0 121 40.5
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 2.0e-15 86.3 129 44.2
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 2.6e-15 85.9 148 41.2
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 4.5e-15 85.1 110 47.3
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 5.9e-15 84.7 136 40.4
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 7.7e-15 84.3 126 39.7
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 7.7e-15 84.3 134 43.3
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 1.3e-14 83.6 124 41.9
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 1.7e-14 83.2 131 41.2
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 1.7e-14 83.2 114 47.4
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 2.9e-14 82.4 131 42.0
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 2.9e-14 82.4 116 44.0
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 8.5e-14 80.9 131 42.0
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 1.1e-13 80.5 124 41.9
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.4e-13 80.1 143 38.5
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 1.9e-13 79.7 120 44.2
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 3.2e-13 79.0 133 39.1
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 5.5e-13 78.2 137 38.0
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 7.2e-13 77.8 110 49.1
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 2.7e-12 75.9 124 40.3
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.7e-12 75.1 143 35.7
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 6.1e-12 74.7 134 38.8
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 2.3e-11 72.8 78 50.0
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 6.7e-11 71.2 140 39.3
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.1e-10 70.5 77 50.6
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 3.3e-10 68.9 135 36.3
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.1e-08 63.9 116 37.9
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 1.8e-08 63.2 138 38.4
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 4.1e-08 62.0 119 40.3
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 5.3e-08 61.6 117 37.6
PSO339G4025 Papaver somniferum HOM05D003527 ORTHO05D004099 1.2e-07 60.5 72 48.6
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.2e-07 60.5 71 47.9
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 1.5e-07 60.1 122 35.2
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 2.0e-07 59.7 68 50.0
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 4.5e-07 58.5 87 42.5
ATR0680G191 Amborella trichopoda HOM05D003527 ORTHO05D004099 7.7e-07 57.8 73 45.2
Peaxi162Scf00926g00516 Petunia axillaris HOM05D007507 ORTHO05D009420 7.7e-07 57.8 126 32.5
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 7.7e-07 57.8 97 39.2
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.7e-06 56.6 70 47.1
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 1.7e-06 56.6 121 37.2
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 2.2e-06 56.2 73 46.6
Duzib093G1072 Durio zibethinus HOM05D003527 ORTHO05D004099 2.9e-06 55.8 67 50.7
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 6.5e-06 54.7 67 49.3
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 6.5e-06 54.7 66 50.0
Gohir.A05G096000 Gossypium hirsutum HOM05D003527 ORTHO05D004099 8.5e-06 54.3 73 42.5
Gohir.D05G096200 Gossypium hirsutum HOM05D003527 ORTHO05D004099 8.5e-06 54.3 73 42.5
Gohir.D11G345500 Gossypium hirsutum HOM05D003527 ORTHO05D004099 8.5e-06 54.3 127 32.3
Gorai.009G099700 Gossypium raimondii HOM05D003527 ORTHO05D004099 8.5e-06 54.3 73 42.5
SalBow8G0028 Salvia bowleyana HOM05D002091 ORTHO05D002140 8.5e-06 54.3 124 33.9
TAR636G1653 Trochodendron aralioides HOM05D003527 ORTHO05D004099 8.5e-06 54.3 70 47.1


User provided reference genes

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