Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6933 Papaver somniferum HOM05D004754 ORTHO05D005566 1.4e-167 592.8 290 100.0
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 2.7e-142 508.8 289 85.1
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 1.3e-141 506.5 289 84.4
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 4.8e-123 444.9 289 73.0
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 1.5e-121 439.9 289 69.6
RcHm_v2.0_Chr5g0052721 Rosa chinensis HOM05D004754 ORTHO05D005566 3.4e-121 438.7 289 72.3
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 7.6e-121 437.6 289 71.3
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 2.2e-120 436.0 289 72.0
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 3.2e-119 432.2 289 72.3
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 7.1e-119 431.0 289 69.9
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 1.6e-118 429.9 289 70.6
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 2.1e-118 429.5 290 70.3
MD17G1076300 Malus domestica HOM05D004754 ORTHO05D005566 2.1e-118 429.5 289 69.6
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 6.0e-118 427.9 289 69.9
TAR626G0708 Trochodendron aralioides HOM05D004754 ORTHO05D005566 6.0e-118 427.9 289 70.6
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 1.0e-117 427.2 289 69.6
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 1.0e-117 427.2 289 69.6
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 1.8e-117 426.4 289 70.9
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 2.3e-117 426.0 289 69.2
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 2.3e-117 426.0 289 70.2
CiPaw.12G121800 Carya illinoinensis HOM05D004754 ORTHO05D005566 5.1e-117 424.9 289 69.2
Potri.017G048600 Populus trichocarpa HOM05D004754 ORTHO05D005566 1.5e-116 423.3 288 71.9
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 2.5e-116 422.5 289 71.6
CANSAT64G0220 Cannabis sativa HOM05D004754 ORTHO05D005566 2.5e-116 422.5 290 70.0
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 3.3e-116 422.2 289 70.6
Sopen01g049820 Solanum pennellii HOM05D004754 ORTHO05D005566 4.3e-116 421.8 289 67.5
Potri.007G112300 Populus trichocarpa HOM05D004754 ORTHO05D005566 7.4e-116 421.0 289 70.9
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 9.6e-116 420.6 290 71.0
Sc12g0003070 Simmondsia chinensis HOM05D004754 ORTHO05D005566 2.1e-115 419.5 289 68.2
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 2.8e-115 419.1 289 67.8
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 2.8e-115 419.1 289 69.6
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 2.8e-115 419.1 289 68.5
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 6.2e-115 417.9 289 70.9
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 6.2e-115 417.9 289 69.6
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 6.2e-115 417.9 289 69.6
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 1.1e-114 417.2 288 70.5
Manes.10G102700 Manihot esculenta HOM05D004754 ORTHO05D005566 1.4e-114 416.8 289 69.9
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 2.4e-114 416.0 289 68.5
Sed0000755 Sechium edule HOM05D004754 ORTHO05D005566 6.9e-114 414.5 289 69.9
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 9.0e-114 414.1 289 68.5
Nitab4.5_0005392g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 9.0e-114 414.1 289 67.1
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 9.0e-114 414.1 289 69.6
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 1.5e-113 413.3 288 68.8
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 2.6e-113 412.5 287 69.7
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 2.6e-113 412.5 288 68.8
Sabra07G0091800 Salix brachista HOM05D004754 ORTHO05D005566 2.6e-113 412.5 289 69.6
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 2.6e-113 412.5 289 69.2
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 3.4e-113 412.1 288 68.4
Lalb_Chr12g0204311 Lupinus albus HOM05D004754 ORTHO05D005566 7.6e-113 411.0 288 69.4
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 1.7e-112 409.8 288 68.1
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 2.2e-112 409.5 289 68.9
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 2.2e-112 409.5 288 68.1
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 2.9e-112 409.1 289 68.9
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 2.9e-112 409.1 289 69.2
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 4.9e-112 408.3 289 70.2
CAN.G1231.9 Capsicum annuum HOM05D004754 ORTHO05D005566 8.4e-112 407.5 289 67.1
CAN.G3385.2 Capsicum annuum HOM05D004754 ORTHO05D005566 8.4e-112 407.5 289 67.1
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 1.9e-111 406.4 288 67.7
VMungo1309G0019 Vigna mungo HOM05D004754 ORTHO05D005566 2.5e-111 406.0 288 68.1
ClCG03G006380 Citrullus lanatus HOM05D004754 ORTHO05D005566 3.2e-111 405.6 289 67.5
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 5.5e-111 404.8 288 68.1
Cc02_g19240 Coffea canephora HOM05D004754 ORTHO05D005566 9.3e-111 404.1 289 64.0
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 1.2e-110 403.7 288 67.4
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 1.2e-110 403.7 289 67.5
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 1.2e-110 403.7 289 66.8
MBI10_g08558_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 2.7e-110 402.5 290 67.6
Hund19582 Selenicereus undatus HOM05D004754 ORTHO05D005566 4.6e-110 401.7 289 66.1
Oeu010398.1 Olea europaea HOM05D004754 ORTHO05D005566 1.0e-109 400.6 287 66.9
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.3e-109 400.2 291 66.3
Nitab4.5_0002815g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 1.3e-109 400.2 289 65.4
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 6.7e-109 397.9 289 65.1
THA.LOC104812357 Tarenaya hassleriana HOM05D004754 ORTHO05D005566 6.7e-109 397.9 289 66.1
RcHm_v2.0_Chr5g0052651 Rosa chinensis HOM05D004754 ORTHO05D005566 8.7e-109 397.5 290 66.6
Haze_09498 Corylus avellana HOM05D004754 ORTHO05D005566 1.9e-108 396.4 277 67.9
Migut.B00386 Erythranthe guttata HOM05D004754 ORTHO05D005566 2.5e-108 396.0 291 64.9
Manes.07G037300 Manihot esculenta HOM05D004754 ORTHO05D005566 2.5e-108 396.0 289 67.5
PGR031G3887 Punica granatum HOM05D004754 ORTHO05D005566 3.3e-108 395.6 289 65.7
Carub.0006s3335 Capsella rubella HOM05D004754 ORTHO05D005566 4.3e-108 395.2 289 65.4
Aqoxy7G03057 Aquilegia oxysepala HOM05D004754 ORTHO05D005566 5.7e-108 394.8 289 65.7
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 9.6e-108 394.0 289 65.7
MELO3C015347.2 Cucumis melo HOM05D004754 ORTHO05D005566 9.6e-108 394.0 289 66.1
CsaV3_1G039230 Cucumis sativus L. HOM05D004754 ORTHO05D005566 1.3e-107 393.7 289 66.8
CARHR252140 Cardamine hirsuta HOM05D004754 ORTHO05D005566 1.1e-106 390.6 289 64.4
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 2.4e-106 389.4 273 68.5
Eucgr.E02475 Eucalyptus grandis HOM05D004754 ORTHO05D005566 2.4e-106 389.4 289 64.7
Sp6g03640 Schrenkiella parvula HOM05D004754 ORTHO05D005566 2.4e-106 389.4 292 63.7
Thhalv10028820m.g Eutrema salsugineum HOM05D004754 ORTHO05D005566 4.1e-106 388.7 265 68.7
MBI09_g11913_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 6.9e-106 387.9 296 64.9
unitig_21.g20734 Utricularia gibba HOM05D004754 ORTHO05D005566 6.9e-106 387.9 289 64.0
AL6G49030 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 9.0e-106 387.5 290 64.5
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 9.0e-106 387.5 289 65.7
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 2.0e-105 386.3 292 65.4
CDE02G1350 Ceratophyllum demersum HOM05D004754 ORTHO05D005566 2.6e-105 386.0 289 64.4
SGA_v2.0_scaffold172G38987 Striga asiatica HOM05D004754 ORTHO05D005566 3.4e-105 385.6 293 64.2
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 7.6e-105 384.4 287 65.2
AT4G05440 Arabidopsis thaliana HOM05D004754 ORTHO05D005566 3.8e-104 382.1 289 63.0
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 1.1e-103 380.6 290 62.4
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.4e-103 380.2 287 63.8
Lalb_Chr12g0204271 Lupinus albus HOM05D004754 ORTHO05D005566 2.5e-103 379.4 288 65.3
Lsat_1_v5_gn_9_95201 Lactuca sativa HOM05D004754 ORTHO05D005566 9.3e-103 377.5 293 61.4
PGSC0003DMG400025770 Solanum tuberosum HOM05D004754 ORTHO05D005566 1.6e-102 376.7 263 65.8
BcaC04g23945 Brassica carinata HOM05D004754 ORTHO05D005566 3.6e-102 375.6 289 61.9
C09p03030 Brassica napus HOM05D004754 ORTHO05D005566 7.9e-102 374.4 289 61.6
Lsat_1_v5_gn_9_95240 Lactuca sativa HOM05D004754 ORTHO05D005566 5.1e-101 371.7 293 60.8
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 4.3e-100 368.6 289 63.0
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 4.8e-99 365.2 276 64.1
GSVIVG01027347001 Vitis vinifera HOM05D004754 ORTHO05D005566 1.1e-98 364.0 254 70.9
GSVIVG01021588001 Vitis vinifera HOM05D004754 ORTHO05D005566 9.0e-98 360.9 242 72.7
BcaB01g01919 Brassica carinata HOM05D004754 ORTHO05D005566 3.4e-97 359.0 290 60.3
MD09G1087500 Malus domestica HOM05D004754 ORTHO05D005566 5.9e-97 358.2 289 62.3
ATR0584G072 Amborella trichopoda HOM05D004754 ORTHO05D005566 7.7e-97 357.8 275 63.3
BraA09t35937Z Brassica rapa HOM05D004754 ORTHO05D005566 7.7e-97 357.8 290 59.7
A09p02940 Brassica napus HOM05D004754 ORTHO05D005566 1.4e-95 353.6 290 59.7
Actinidia13483 Actinidia chinensis HOM05D004754 ORTHO05D005566 5.5e-95 351.7 257 65.0
BolC9t53233H Brassica oleracea HOM05D004754 ORTHO05D005566 1.2e-94 350.5 293 59.0
Aa31LG9G9140 Aethionema arabicum HOM05D004754 ORTHO05D005566 1.8e-90 336.7 250 63.2
HanXRQChr03g0076141 Helianthus annuus HOM05D004754 ORTHO05D005566 6.9e-90 334.7 279 59.9
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.0e-84 316.6 289 57.1
Sc12g0003000 Simmondsia chinensis HOM05D004754 ORTHO05D005566 1.9e-79 300.1 205 67.3
Atru.chr10.956 Acer truncatum HOM05D004754 ORTHO05D005566 1.6e-78 297.0 214 70.1
AagrBONN_evm.TU.Sc2ySwM_344.1746 Anthoceros agrestis HOM05D004754 ORTHO05D005566 3.6e-78 295.8 275 55.6
Gohir.D13G114400 Gossypium hirsutum HOM05D004754 ORTHO05D005566 5.2e-77 292.0 209 68.9
Pp3c20_22950 Physcomitrium patens HOM05D004754 ORTHO05D005566 7.5e-76 288.1 282 53.2
Mapoly0049s0079 Marchantia polymorpha HOM05D004754 ORTHO05D005566 5.9e-73 278.5 274 53.3
SMO144G0026 Selaginella moellendorffii HOM05D004754 ORTHO05D005566 1.0e-72 277.7 304 51.6
AagrBONN_evm.TU.Sc2ySwM_228.5754 Anthoceros agrestis HOM05D004754 ORTHO05D005566 2.2e-72 276.6 296 49.0
AL6G49110 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 1.1e-71 274.2 202 64.4
SEGI_36860 Sequoiadendron giganteum HOM05D004754 ORTHO05D005566 9.8e-68 261.2 246 55.7
Haze_09496 Corylus avellana HOM05D004754 ORTHO05D005566 1.6e-65 253.8 250 54.4
Medtr2g048690 Medicago truncatula HOM05D004754 ORTHO05D005566 1.4e-58 230.7 232 53.9
Zm00001eb126310 Zea mays HOM05D004754 ORTHO05D005566 1.8e-58 230.3 364 37.9
CBR_g50844 Chara braunii HOM05D004754 ORTHO05D005566 2.4e-58 229.9 185 57.8
QL05p054023 Quercus lobata HOM05D004754 ORTHO05D005566 1.3e-51 207.6 185 54.6
MCO03G595 Micromonas commoda HOM05D004754 ORTHO05D005566 1.5e-47 194.1 250 44.4
Sc10g0000250 Simmondsia chinensis HOM05D004754 ORTHO05D005566 2.1e-46 190.3 144 59.0
PRCOL_00002688 Prasinoderma coloniale HOM05D004754 ORTHO05D005566 7.8e-41 171.8 298 36.2
ECA234G3378 Erigeron canadensis HOM05D004754 ORTHO05D000282 1.9e-39 167.2 122 63.1
Migut.N02733 Erythranthe guttata HOM05D004754 ORTHO05D005566 1.8e-37 160.6 133 58.6
VMungo1309G1961 Vigna mungo HOM05D004754 ORTHO05D005566 2.7e-33 146.7 189 46.6
TPR.G5080 Trifolium pratense HOM05D004754 ORTHO05D005566 4.7e-30 136.0 106 62.3
Psat5g233560 Pisum sativum HOM05D004754 ORTHO05D005566 8.9e-29 131.7 109 63.3
Glyma.02G261300 Glycine max HOM05D004754 ORTHO05D005566 8.4e-27 125.2 89 70.8
HanXRQChr11g0343411 Helianthus annuus HOM05D004754 ORTHO05D005566 1.2e-25 121.3 108 53.7
HanXRQChr11g0343421 Helianthus annuus HOM05D004754 ORTHO05D005566 1.2e-25 121.3 108 53.7
Medtr8g072370 Medicago truncatula HOM05D004754 ORTHO05D005566 2.3e-24 117.1 152 44.7
HanXRQChr04g0094771 Helianthus annuus HOM05D004754 ORTHO05D005566 7.3e-23 112.1 108 50.9
Cre07.g312100 Chlamydomonas reinhardtii HOM05D004754 ORTHO05D005566 1.7e-19 100.9 406 26.4
HPP92_027351 Vanilla planifolia HOM05D004754 ORTHO05D005566 4.6e-17 92.8 75 54.7
Lj6C128T1 Lonicera japonica HOM05D004754 ORTHO05D005566 1.6e-14 84.3 74 50.0
Lju897C0T7 Lonicera japonica HOM05D004754 ORTHO05D005566 3.4e-12 76.6 74 47.3
Glyma.02G261200 Glycine max HOM05D004754 ORTHO05D005566 9.9e-12 75.1 66 53.0
Potri.017G049500 Populus trichocarpa HOM05D004754 ORTHO05D005566 5.4e-10 69.3 39 87.2
HPP92_027352 Vanilla planifolia HOM05D004754 ORTHO05D005566 3.9e-08 63.2 87 41.4
Potri.006G050600 Populus trichocarpa HOM05D004754 ORTHO05D005566 7.4e-07 58.9 47 63.8


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