Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 1.4e-108 396.4 203 100.0
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 1.8e-100 369.4 205 94.1
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 5.6e-62 241.5 202 66.3
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 1.1e-54 217.2 202 57.4
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.3e-53 213.8 159 69.8
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 6.2e-53 211.5 192 60.9
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 4.0e-52 208.8 157 68.2
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 5.3e-52 208.4 184 63.0
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 9.0e-52 207.6 157 67.5
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 1.2e-51 207.2 152 71.7
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.5e-51 206.8 190 62.6
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.5e-51 206.8 151 72.2
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 2.0e-51 206.5 158 69.0
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.6e-51 206.1 210 58.6
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 2.6e-51 206.1 210 58.6
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.4e-51 205.7 165 64.2
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 9.9e-51 204.1 192 58.3
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 9.9e-51 204.1 160 66.2
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 1.7e-50 203.4 182 58.8
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 1.7e-50 203.4 176 62.5
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 1.7e-50 203.4 198 58.1
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 2.2e-50 203.0 213 54.5
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 3.8e-50 202.2 155 66.5
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 3.8e-50 202.2 163 63.8
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 6.4e-50 201.4 163 64.4
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 8.4e-50 201.1 165 64.2
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 1.1e-49 200.7 200 56.0
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 1.9e-49 199.9 177 61.6
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.4e-49 199.5 159 64.8
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 5.4e-49 198.4 207 53.1
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 7.1e-49 198.0 153 69.9
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 7.1e-49 198.0 175 62.9
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.1e-48 196.4 184 63.0
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.7e-48 196.1 160 67.5
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 2.7e-48 196.1 180 60.6
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 3.5e-48 195.7 159 67.3
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 7.9e-48 194.5 155 68.4
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.0e-47 194.1 186 59.7
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.7e-47 193.4 156 64.1
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 2.3e-47 193.0 153 64.7
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 3.0e-47 192.6 137 67.2
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 3.9e-47 192.2 155 67.1
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 1.9e-46 189.9 116 76.7
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 2.5e-46 189.5 158 65.8
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 4.3e-46 188.7 158 64.6
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 5.6e-46 188.3 155 63.9
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 5.6e-46 188.3 193 57.0
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 7.3e-46 188.0 155 63.9
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 7.3e-46 188.0 186 58.6
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 9.6e-46 187.6 181 58.0
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.6e-45 186.8 178 56.2
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 3.6e-45 185.7 216 51.9
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 4.8e-45 185.3 160 62.5
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 6.2e-45 184.9 161 60.9
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 1.1e-44 184.1 158 64.6
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 3.1e-44 182.6 176 59.7
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 5.3e-44 181.8 155 59.4
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 9.0e-44 181.0 107 77.6
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 1.5e-43 180.3 191 53.9
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 1.5e-43 180.3 157 59.9
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 2.0e-43 179.9 196 53.6
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.6e-43 179.5 157 59.9
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 2.6e-43 179.5 176 54.5
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 3.4e-43 179.1 153 62.7
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.4e-43 179.1 157 59.9
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 3.4e-43 179.1 182 54.9
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 7.6e-43 177.9 193 50.8
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 7.6e-43 177.9 108 75.9
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 9.9e-43 177.6 154 64.3
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.7e-42 176.8 192 55.2
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 2.9e-42 176.0 213 51.2
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 4.9e-42 175.3 176 55.7
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 4.9e-42 175.3 162 56.8
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 6.4e-42 174.9 187 54.0
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 6.4e-42 174.9 188 52.1
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 6.4e-42 174.9 194 53.1
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 8.4e-42 174.5 164 58.5
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 8.4e-42 174.5 190 52.6
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 1.4e-41 173.7 186 54.3
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 1.4e-41 173.7 186 54.3
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.4e-41 173.7 148 62.2
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 2.4e-41 172.9 186 53.8
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 2.4e-41 172.9 186 53.8
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 2.4e-41 172.9 159 61.0
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 3.2e-41 172.6 171 57.3
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 4.2e-41 172.2 177 55.9
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 4.2e-41 172.2 110 73.6
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 5.5e-41 171.8 186 53.8
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 7.1e-41 171.4 153 60.1
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 7.1e-41 171.4 193 50.8
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 7.1e-41 171.4 189 55.0
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.2e-40 170.6 158 59.5
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 6.7e-39 164.9 146 64.4
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.5e-38 163.7 222 45.0
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.5e-38 163.7 163 55.8
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 4.3e-38 162.2 108 65.7
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 2.1e-37 159.8 163 53.4
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.1e-36 157.5 198 50.5
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.8e-36 156.8 121 63.6
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 4.0e-36 155.6 190 51.6
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 4.0e-36 155.6 112 67.0
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.0e-34 151.0 135 59.3
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 6.5e-34 148.3 103 68.9
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.9e-31 139.0 175 50.9
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.5e-30 137.1 91 70.3
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 1.9e-30 136.7 141 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 3.3e-30 136.0 121 55.4
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 4.3e-30 135.6 156 52.6
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 1.0e-26 124.4 110 55.5
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 1.9e-25 120.2 108 53.7
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 5.5e-25 118.6 144 50.7
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 1.0e-23 114.4 101 51.5
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 7.2e-17 91.7 72 59.7
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 3.0e-15 86.3 146 41.1
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 7.7e-11 71.6 141 44.7
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 2.7e-08 63.2 107 47.7
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 5.7e-06 55.5 76 43.4


User provided reference genes

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