Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 4.0e-254 880.9 443 100.0
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 4.6e-194 681.4 387 91.5
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 3.2e-102 376.3 348 59.5
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 7.3e-99 365.2 387 53.5
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.3e-98 364.4 391 53.7
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 2.0e-96 357.1 279 66.3
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 9.9e-96 354.8 339 58.4
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 8.4e-95 351.7 362 54.4
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 9.3e-94 348.2 303 61.7
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 3.5e-93 346.3 365 54.8
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 4.6e-93 345.9 359 54.3
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 1.0e-92 344.7 364 53.8
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 1.3e-92 344.4 291 61.5
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 2.3e-92 343.6 280 64.6
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 5.1e-92 342.4 360 54.7
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 6.6e-92 342.0 352 55.4
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.5e-91 340.9 387 51.2
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 2.5e-91 340.1 378 50.8
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 3.3e-91 339.7 307 59.9
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 4.3e-91 339.3 378 50.8
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 5.6e-91 339.0 295 62.0
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 9.6e-91 338.2 357 53.2
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 6.2e-90 335.5 305 58.0
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 1.4e-89 334.3 352 54.0
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 3.1e-89 333.2 358 55.9
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 3.1e-89 333.2 365 52.6
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 1.2e-88 331.3 309 58.3
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 1.2e-88 331.3 359 54.3
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 1.5e-88 330.9 366 53.3
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 2.6e-88 330.1 292 59.9
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 4.5e-88 329.3 330 56.1
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 7.6e-88 328.6 387 50.4
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 9.9e-88 328.2 355 51.8
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 9.9e-88 328.2 365 51.8
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 4.9e-87 325.9 310 55.8
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 1.1e-86 324.7 365 51.8
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 1.4e-86 324.3 328 56.1
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 2.4e-86 323.6 347 55.0
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 2.4e-86 323.6 359 54.0
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 7.1e-86 322.0 281 62.3
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 9.3e-86 321.6 283 59.7
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 1.2e-85 321.2 312 55.4
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 2.1e-85 320.5 358 54.5
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 3.5e-85 319.7 296 59.1
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 1.0e-84 318.2 293 58.4
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 3.0e-84 316.6 361 49.9
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 3.9e-84 316.2 290 59.0
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.1e-83 314.7 357 52.4
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 1.5e-83 314.3 353 53.0
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 1.6e-82 310.8 362 49.7
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 2.8e-82 310.1 353 52.1
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 3.7e-82 309.7 277 59.9
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 4.8e-82 309.3 259 62.5
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 6.2e-82 308.9 273 59.3
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 6.2e-82 308.9 283 58.7
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 8.1e-82 308.5 307 56.4
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 3.1e-81 306.6 350 51.4
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 4.0e-81 306.2 348 51.7
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 4.0e-81 306.2 283 57.6
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 6.9e-81 305.4 364 50.8
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 2.6e-80 303.5 301 55.1
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 3.4e-80 303.1 285 55.4
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 5.8e-80 302.4 308 55.2
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 1.7e-79 300.8 292 54.8
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 1.7e-79 300.8 292 54.8
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 2.2e-79 300.4 302 54.0
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 2.9e-79 300.1 307 54.7
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 2.9e-79 300.1 296 55.4
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.9e-79 299.3 318 54.7
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 6.5e-79 298.9 358 53.1
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 1.4e-78 297.7 341 50.1
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 1.4e-78 297.7 344 49.4
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 1.4e-78 297.7 244 61.9
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.5e-78 297.0 330 53.0
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 4.2e-78 296.2 327 52.6
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 1.2e-77 294.7 327 50.8
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.6e-77 294.3 278 55.8
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 3.0e-76 290.0 319 51.7
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 3.0e-76 290.0 269 57.6
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 3.0e-76 290.0 315 51.4
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 3.0e-76 290.0 325 50.8
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 6.7e-76 288.9 315 53.0
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 1.1e-75 288.1 347 48.1
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 2.5e-75 287.0 340 49.1
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.3e-75 286.6 390 47.2
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 4.3e-75 286.2 342 48.8
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 9.6e-75 285.0 365 46.8
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 4.8e-74 282.7 261 57.1
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 1.2e-72 278.1 305 51.8
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 2.6e-72 276.9 311 52.1
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 5.5e-70 269.2 344 46.8
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 8.7e-68 261.9 360 46.4
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 2.2e-66 257.3 244 57.8
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 4.8e-66 256.1 218 62.4
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.4e-65 254.6 343 47.5
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 5.0e-63 246.1 301 45.5
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 2.5e-62 243.8 215 61.4
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 3.6e-61 240.0 203 63.5
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 7.9e-61 238.8 322 44.1
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 1.0e-55 221.9 296 40.9
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 2.8e-50 203.8 198 53.5
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 3.2e-46 190.3 195 50.8
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 1.8e-44 184.5 178 56.7
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 1.3e-42 178.3 201 46.3
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 2.9e-39 167.2 187 50.8
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 4.7e-37 159.8 291 34.7
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 4.4e-35 153.3 274 37.6
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 1.7e-34 151.4 178 48.9
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 6.3e-34 149.4 229 38.9
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 8.3e-34 149.1 147 55.1
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 5.4e-33 146.4 250 40.8
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 3.2e-30 137.1 208 38.5
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 5.5e-30 136.3 261 33.7
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 9.1e-25 119.0 280 33.9
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 1.7e-23 114.8 113 60.2
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.3e-22 110.2 230 36.1
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 2.8e-21 107.5 251 35.9
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 2.3e-20 104.4 102 53.9
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 6.8e-20 102.8 282 31.2
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 6.8e-20 102.8 188 34.0
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 3.4e-19 100.5 230 34.3
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 5.9e-16 89.7 106 48.1
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.3e-15 87.8 109 48.6
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 7.3e-14 82.8 132 38.6
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-13 82.0 113 45.1
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 6.0e-08 63.2 131 35.1
Actinidia09700 Actinidia chinensis HOM05D006259 ORTHO05D053169 3.9e-07 60.5 60 50.0
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 4.3e-06 57.0 64 48.4


User provided reference genes

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