Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 4.6e-208 727.6 360 100.0
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 2.9e-202 708.4 360 97.5
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 2.2e-125 453.0 378 61.6
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 2.0e-123 446.4 390 61.0
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 3.5e-123 445.7 396 58.3
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 3.6e-120 435.6 401 57.6
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 6.8e-119 431.4 392 57.9
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 8.8e-119 431.0 345 62.9
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 7.5e-118 427.9 379 59.9
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 2.8e-117 426.0 379 58.6
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.7e-117 425.6 379 59.6
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.1e-116 424.1 330 63.3
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 7.0e-116 421.4 389 57.1
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.6e-115 420.2 318 64.8
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 2.0e-115 419.9 376 58.8
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.3e-114 417.2 396 57.1
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.3e-114 417.2 379 58.6
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 1.7e-114 416.8 338 60.9
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.3e-114 416.4 315 64.4
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 3.8e-114 415.6 327 63.3
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 3.8e-114 415.6 327 63.3
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.5e-113 413.7 341 61.9
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.9e-113 413.3 387 56.3
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.5e-113 412.9 344 59.3
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 9.5e-113 411.0 395 56.7
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 3.6e-112 409.1 324 62.3
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.0e-111 407.5 341 59.8
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 4.0e-111 405.6 337 60.5
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 4.0e-111 405.6 394 56.1
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 6.8e-111 404.8 329 61.4
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 8.9e-111 404.4 326 61.0
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.5e-110 403.7 325 62.2
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.5e-110 403.7 328 60.4
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 2.6e-110 402.9 345 58.0
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 4.4e-110 402.1 350 57.7
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 9.8e-110 401.0 344 59.0
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.3e-109 400.6 420 51.9
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 3.7e-109 399.1 373 57.9
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 3.7e-109 399.1 336 58.0
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 1.4e-108 397.1 374 56.4
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 4.1e-108 395.6 390 53.3
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 9.2e-108 394.4 323 61.6
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 9.2e-108 394.4 342 57.9
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.2e-107 394.0 390 53.3
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 2.0e-107 393.3 345 57.4
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 3.5e-107 392.5 368 56.0
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 4.6e-107 392.1 345 56.8
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 7.8e-107 391.3 391 53.5
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 3.9e-106 389.0 343 57.1
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.1e-105 387.5 386 53.1
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 5.6e-105 385.2 371 55.0
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.2e-104 384.0 371 54.7
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.2e-104 384.0 371 54.7
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.2e-104 384.0 359 56.0
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 1.6e-104 383.6 351 56.7
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 2.1e-104 383.3 390 54.9
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 2.1e-104 383.3 347 55.0
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 4.7e-104 382.1 367 54.2
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 8.0e-104 381.3 374 53.5
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.8e-103 380.2 371 54.7
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 4.0e-103 379.0 323 60.1
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 4.0e-103 379.0 371 54.4
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 4.0e-103 379.0 323 57.6
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 8.9e-103 377.9 368 54.6
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 1.2e-102 377.5 329 56.8
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 5.8e-102 375.2 323 57.9
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 5.8e-102 375.2 380 53.4
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 3.7e-101 372.5 326 58.0
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 6.4e-101 371.7 385 51.9
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 4.1e-100 369.0 344 54.7
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 2.7e-99 366.3 326 54.9
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 7.8e-99 364.8 352 54.8
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 3.0e-98 362.8 349 54.4
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 5.0e-98 362.1 332 54.2
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 5.0e-98 362.1 332 54.2
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.9e-97 360.1 390 50.8
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 2.5e-97 359.8 362 54.1
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 5.6e-97 358.6 443 46.0
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 2.8e-96 356.3 351 52.7
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 2.6e-94 349.7 352 54.5
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.9e-92 343.6 330 51.8
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 2.1e-91 340.1 300 59.0
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 2.7e-91 339.7 445 44.5
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 4.4e-86 322.4 316 55.4
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 5.4e-84 315.5 333 52.0
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.7e-83 313.2 323 49.2
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 1.7e-82 310.5 548 38.9
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 3.0e-82 309.7 277 56.7
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.0e-78 297.0 298 54.0
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 2.6e-78 296.6 382 44.5
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 8.4e-77 291.6 338 48.8
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.3e-74 284.3 236 61.0
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 6.6e-74 282.0 320 45.0
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 4.3e-73 279.3 294 53.4
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 7.3e-73 278.5 276 51.8
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.6e-72 277.3 243 57.2
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 1.3e-66 257.7 320 43.8
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 9.3e-60 235.0 230 49.1
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 4.6e-59 232.6 328 40.9
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 4.0e-55 219.5 169 60.9
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 4.5e-46 189.5 168 56.0
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.5e-41 173.7 344 34.0
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.3e-29 134.8 102 64.7
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 5.7e-25 119.4 98 59.2
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 5.7e-17 92.8 99 46.5
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 7.5e-17 92.4 105 48.6
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 9.7e-17 92.0 69 65.2
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.0e-14 84.3 50 80.0
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 4.7e-11 73.2 53 67.9
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.8e-10 71.2 47 66.0
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.3e-08 65.1 39 69.2
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.3e-08 65.1 98 40.8
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.0e-06 57.8 51 51.0


User provided reference genes

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