Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6679 Papaver somniferum HOM05D007124 ORTHO05D008980 4.0e-34 147.5 74 100.0
Nn1g07252 Nelumbo nucifera HOM05D007124 ORTHO05D008980 1.3e-21 105.9 64 76.6
MBI08_g04916_MAGBIO Magnolia biondii HOM05D007124 ORTHO05D008980 1.7e-21 105.5 72 70.8
Hma1.2p1_1332F.1_g276070 Hydrangea macrophylla HOM05D007124 ORTHO05D008980 3.0e-21 104.8 67 70.1
ATR0317G094 Amborella trichopoda HOM05D007124 ORTHO05D008980 3.9e-21 104.4 67 70.1
MBI15_g24201_MAGBIO Magnolia biondii HOM05D007124 ORTHO05D008980 3.9e-21 104.4 72 69.4
Nitab4.5_0000755g0100 Nicotiana tabacum HOM05D007124 ORTHO05D008980 3.9e-21 104.4 70 70.0
Peaxi162Scf00040g00004 Petunia axillaris HOM05D007124 ORTHO05D008980 3.9e-21 104.4 66 72.7
Lsat_1_v5_gn_5_3160 Lactuca sativa HOM05D007124 ORTHO05D008980 6.6e-21 103.6 72 70.8
Gohir.D05G373400 Gossypium hirsutum HOM05D007124 ORTHO05D008980 8.7e-21 103.2 70 68.6
Gorai.009G442100 Gossypium raimondii HOM05D007124 ORTHO05D008980 8.7e-21 103.2 70 68.6
SGA_v2.0_scaffold363G49951 Striga asiatica HOM05D007124 ORTHO05D008980 8.7e-21 103.2 72 68.1
Oeu013124.1 Olea europaea HOM05D007124 ORTHO05D008980 1.1e-20 102.8 70 68.6
Hma1.2p1_0036F.1_g023250 Hydrangea macrophylla HOM05D007124 ORTHO05D008980 1.5e-20 102.4 67 68.7
Manes.12G070300 Manihot esculenta HOM05D007124 ORTHO05D008980 1.5e-20 102.4 66 72.7
Sopen11g027200 Solanum pennellii HOM05D007124 ORTHO05D008980 1.5e-20 102.4 64 73.4
PGSC0003DMG400026339 Solanum tuberosum HOM05D007124 ORTHO05D008980 1.5e-20 102.4 64 73.4
Nitab4.5_0010969g0020 Nicotiana tabacum HOM05D007124 ORTHO05D008980 1.9e-20 102.1 70 68.6
Cpa.g.sc12.260 Carica papaya HOM05D007124 ORTHO05D008980 2.5e-20 101.7 66 71.2
Duzib170G0848 Durio zibethinus HOM05D007124 ORTHO05D008980 2.5e-20 101.7 70 67.1
Duzib213G1022 Durio zibethinus HOM05D007124 ORTHO05D008980 2.5e-20 101.7 70 67.1
Migut.H01802 Erythranthe guttata HOM05D007124 ORTHO05D008980 2.5e-20 101.7 67 68.7
Eucgr.F00713 Eucalyptus grandis HOM05D007124 ORTHO05D008980 2.5e-20 101.7 67 70.1
Ciclev10010691m.g Citrus clementina HOM05D007124 ORTHO05D008980 3.3e-20 101.3 66 69.7
Aqoxy1G03004 Aquilegia oxysepala HOM05D007124 ORTHO05D008980 4.3e-20 100.9 65 70.8
CSS0008346 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 4.3e-20 100.9 64 71.9
CSS0015017 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 4.3e-20 100.9 64 71.9
CSS0017817 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 4.3e-20 100.9 64 71.9
Os11g0516100 Oryza sativa ssp. japonica HOM05D007124 ORTHO05D008980 4.3e-20 100.9 67 67.2
Actinidia32270 Actinidia chinensis HOM05D002089 ORTHO05D002848 5.6e-20 100.5 64 71.9
QL08p007019 Quercus lobata HOM05D007124 ORTHO05D008980 5.6e-20 100.5 67 70.1
Gohir.1Z049637 Gossypium hirsutum HOM05D007124 ORTHO05D008980 7.3e-20 100.1 70 67.1
Medtr2g014910 Medicago truncatula HOM05D007124 ORTHO05D008980 7.3e-20 100.1 71 69.0
Ciclev10009664m.g Citrus clementina HOM05D007124 ORTHO05D008980 9.6e-20 99.8 66 68.2
DCAR_009645 Daucus carota HOM05D007124 ORTHO05D008980 9.6e-20 99.8 68 70.6
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 1.3e-19 99.4 67 68.7
CSS0011277 Camellia sinensis var. sinensis HOM05D007124 ORTHO05D008980 1.3e-19 99.4 64 70.3
TWI39G0219 Tripterygium wilfordii HOM05D007124 ORTHO05D008980 1.3e-19 99.4 74 70.3
SGA_v2.0_scaffold120G32846 Striga asiatica HOM05D007124 ORTHO05D008980 2.1e-19 98.6 59 76.3
CiPaw.12G132500 Carya illinoinensis HOM05D007124 ORTHO05D008980 2.8e-19 98.2 65 69.2
Potri.001G314100 Populus trichocarpa HOM05D007124 ORTHO05D008980 2.8e-19 98.2 67 67.2
Medtr2g014940 Medicago truncatula HOM05D007124 ORTHO05D008980 3.6e-19 97.8 66 71.2
Sp6g17060 Schrenkiella parvula HOM05D007124 ORTHO05D008980 3.6e-19 97.8 67 67.2
Sed0025305 Sechium edule HOM05D007124 ORTHO05D008980 3.6e-19 97.8 70 67.1
Sc12g0005860 Simmondsia chinensis HOM05D007124 ORTHO05D008980 3.6e-19 97.8 67 67.2
EL10Ac7g17641 Beta vulgaris HOM05D007124 ORTHO05D008980 4.8e-19 97.4 65 67.7
Lalb_Chr18g0059321 Lupinus albus HOM05D007124 ORTHO05D008980 4.8e-19 97.4 67 67.2
THA.LOC104811625 Tarenaya hassleriana HOM05D007124 ORTHO05D008980 4.8e-19 97.4 72 66.7
CiPaw.11G193400 Carya illinoinensis HOM05D007124 ORTHO05D008980 6.2e-19 97.1 65 67.7
Lalb_Chr15g0089611 Lupinus albus HOM05D007124 ORTHO05D008980 6.2e-19 97.1 74 67.6
Psat1g201480 Pisum sativum HOM05D007124 ORTHO05D008980 6.2e-19 97.1 67 68.7
Sabra16G0198600 Salix brachista HOM05D007124 ORTHO05D008980 6.2e-19 97.1 65 69.2
arahy.Tifrunner.gnm1.ann1.902QMU Arachis hypogaea HOM05D007124 ORTHO05D008980 8.1e-19 96.7 64 71.9
Cc05_g14150 Coffea canephora HOM05D007124 ORTHO05D008980 8.1e-19 96.7 67 68.7
Psat0s3039g0080 Pisum sativum HOM05D007124 ORTHO05D008980 8.1e-19 96.7 67 68.7
Thecc.07G030700 Theobroma cacao HOM05D007124 ORTHO05D008980 8.1e-19 96.7 70 65.7
Cfa020296 Carpinus fangiana HOM05D007124 ORTHO05D008980 1.1e-18 96.3 58 75.9
PGR004G2244 Punica granatum HOM05D007124 ORTHO05D008980 1.1e-18 96.3 73 60.3
A10p12390 Brassica napus HOM05D007124 ORTHO05D008980 1.4e-18 95.9 66 66.7
C09p45870 Brassica napus HOM05D007124 ORTHO05D008980 1.4e-18 95.9 66 66.7
BraA10t43334Z Brassica rapa HOM05D007124 ORTHO05D008980 1.4e-18 95.9 66 66.7
arahy.Tifrunner.gnm1.ann1.E6QS8A Arachis hypogaea HOM05D007124 ORTHO05D008980 1.8e-18 95.5 64 70.3
Glyma.10G051000 Glycine max HOM05D007124 ORTHO05D008980 1.8e-18 95.5 67 67.2
Lj6g0008322 Lotus japonicus HOM05D007124 ORTHO05D008980 1.8e-18 95.5 64 70.3
Phvul.006G180400 Phaseolus vulgaris HOM05D007124 ORTHO05D008980 1.8e-18 95.5 67 67.2
BcaC03g14263 Brassica carinata HOM05D007124 ORTHO05D008980 2.4e-18 95.1 64 67.2
A02p09870 Brassica napus HOM05D007124 ORTHO05D008980 2.4e-18 95.1 64 67.2
C02p16400 Brassica napus HOM05D007124 ORTHO05D008980 2.4e-18 95.1 64 67.2
BolC2t07742H Brassica oleracea HOM05D007124 ORTHO05D008980 2.4e-18 95.1 64 67.2
BraA02t06051Z Brassica rapa HOM05D007124 ORTHO05D008980 2.4e-18 95.1 64 67.2
AUR62008759 Chenopodium quinoa HOM05D007124 ORTHO05D008980 2.4e-18 95.1 70 64.3
AUR62025479 Chenopodium quinoa HOM05D007124 ORTHO05D008980 2.4e-18 95.1 70 64.3
Glyma.13G138500 Glycine max HOM05D007124 ORTHO05D008980 2.4e-18 95.1 67 67.2
Glyma.13G152338 Glycine max HOM05D007124 ORTHO05D008980 2.4e-18 95.1 67 67.2
BcaB08g35876 Brassica carinata HOM05D007124 ORTHO05D008980 4.0e-18 94.4 68 66.2
BcaC04g20268 Brassica carinata HOM05D007124 ORTHO05D008980 4.0e-18 94.4 66 65.2
BolC9t57437H Brassica oleracea HOM05D007124 ORTHO05D008980 4.0e-18 94.4 66 65.2
Haze_09723 Corylus avellana HOM05D007124 ORTHO05D008980 4.0e-18 94.4 66 68.2
CANSAT11G2294 Cannabis sativa HOM05D007124 ORTHO05D008980 5.3e-18 94.0 67 64.2
Ca_00376_v3 Cicer arietinum L. HOM05D007124 ORTHO05D008980 5.3e-18 94.0 66 66.7
Ca_00400_v3 Cicer arietinum L. HOM05D007124 ORTHO05D008980 5.3e-18 94.0 66 66.7
FAN21G2784 Fragaria x ananassa HOM05D007124 ORTHO05D008980 5.3e-18 94.0 69 59.4
AL8G30630 Arabidopsis lyrata HOM05D007124 ORTHO05D008980 6.9e-18 93.6 67 62.7
AT5G55125 Arabidopsis thaliana HOM05D007124 ORTHO05D008980 6.9e-18 93.6 67 62.7
Carub.0008s1542 Capsella rubella HOM05D007124 ORTHO05D008980 6.9e-18 93.6 77 61.0
Prupe.4G220900 Prunus persica HOM05D007124 ORTHO05D008980 9.0e-18 93.2 68 60.3
RcHm_v2.0_Chr5g0041121 Rosa chinensis HOM05D007124 ORTHO05D008980 9.0e-18 93.2 69 59.4
SHI10538 Sapria himalayana HOM05D007124 ORTHO05D008980 9.0e-18 93.2 67 64.2
FAN02G4031 Fragaria x ananassa HOM05D007124 ORTHO05D008980 1.2e-17 92.8 58 67.2
FAN05G4905 Fragaria x ananassa HOM05D007124 ORTHO05D008980 1.2e-17 92.8 58 67.2
Aa31LG3G11120 Aethionema arabicum HOM05D007124 ORTHO05D008980 1.5e-17 92.4 74 62.2
Ah.15g092770 Amaranthus hybridus HOM05D007124 ORTHO05D008980 1.5e-17 92.4 72 62.5
FvH4_3g23350 Fragaria vesca HOM05D007124 ORTHO05D008980 2.0e-17 92.0 67 59.7
FAN25G2055 Fragaria x ananassa HOM05D007124 ORTHO05D008980 2.0e-17 92.0 67 59.7
vmacro13375 Vaccinium macrocarpon HOM05D007124 ORTHO05D008980 2.0e-17 92.0 67 65.7
CARHR268480 Cardamine hirsuta HOM05D007124 ORTHO05D008980 2.6e-17 91.7 67 62.7
FAN16G3348 Fragaria x ananassa HOM05D007124 ORTHO05D008980 2.6e-17 91.7 67 59.7
FvH4_6g31480 Fragaria vesca HOM05D007124 ORTHO05D008980 3.4e-17 91.3 58 67.2
FAN11G2242 Fragaria x ananassa HOM05D007124 ORTHO05D008980 4.5e-17 90.9 67 58.2
Thhalv10015372m.g Eutrema salsugineum HOM05D007124 ORTHO05D008980 7.6e-17 90.1 67 62.7
HPP92_015305 Vanilla planifolia HOM05D007124 ORTHO05D008980 7.6e-17 90.1 67 62.7
HanXRQChr08g0233551 Helianthus annuus HOM05D007124 ORTHO05D008980 1.7e-16 89.0 64 68.8
Glyma.10G069200 Glycine max HOM05D007124 ORTHO05D008980 1.9e-15 85.5 65 64.6
Solyc11g068490.1 Solanum lycopersicum HOM05D007124 ORTHO05D008980 1.9e-15 85.5 56 71.4
MELO3C004505.2 Cucumis melo HOM05D007124 ORTHO05D008980 2.4e-15 85.1 58 65.5
ECA246G4235 Erigeron canadensis HOM05D007124 ORTHO05D008980 3.2e-15 84.7 50 76.0
CsaV3_2G002880 Cucumis sativus L. HOM05D007124 ORTHO05D008980 9.3e-15 83.2 58 63.8
Sabra16G0233800 Salix brachista HOM05D000336 ORTHO05D000593 1.8e-13 79.0 57 66.7
MD03G1195200 Malus domestica HOM05D007124 ORTHO05D008980 1.5e-12 75.9 60 58.3
BcaB05g22183 Brassica carinata HOM05D007124 ORTHO05D008980 4.3e-12 74.3 58 60.3
Mapoly0141s0007 Marchantia polymorpha HOM05D007124 ORTHO05D008980 2.1e-06 55.5 58 43.1


User provided reference genes

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