Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 6.0e-177 624.0 304 100.0
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 3.1e-165 585.1 306 93.5
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 2.3e-152 542.3 274 94.5
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 3.7e-142 508.4 297 81.5
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 2.5e-138 495.7 296 80.4
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 7.9e-137 490.7 303 78.9
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 1.0e-136 490.3 294 78.2
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 3.9e-136 488.4 303 79.2
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 6.7e-136 487.6 298 77.9
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 1.1e-135 486.9 297 78.8
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 2.0e-135 486.1 298 77.2
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 2.6e-135 485.7 286 80.4
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 3.3e-135 485.3 302 78.1
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 5.7e-135 484.6 288 79.9
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 5.7e-135 484.6 294 77.2
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 7.4e-135 484.2 300 79.7
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 9.7e-135 483.8 304 77.0
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 2.2e-134 482.6 302 77.8
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 1.1e-133 480.3 296 78.0
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 1.4e-133 479.9 297 76.4
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 1.8e-133 479.6 303 75.6
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 1.8e-133 479.6 295 78.0
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 1.8e-133 479.6 283 79.2
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.8e-133 479.6 302 77.2
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 2.4e-133 479.2 299 76.6
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 4.1e-133 478.4 294 78.2
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 5.3e-133 478.0 299 77.3
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 5.3e-133 478.0 302 76.8
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 7.0e-133 477.6 291 77.7
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 2.0e-132 476.1 306 75.5
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 2.0e-132 476.1 294 77.6
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 2.0e-132 476.1 280 81.1
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 2.6e-132 475.7 303 75.2
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 1.0e-131 473.8 295 76.3
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 2.2e-131 472.6 303 74.9
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 2.2e-131 472.6 303 74.9
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 2.2e-131 472.6 303 74.9
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 5.0e-131 471.5 296 77.4
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 6.5e-131 471.1 298 73.8
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 6.5e-131 471.1 303 75.6
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 6.5e-131 471.1 279 78.9
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 3.2e-130 468.8 304 75.0
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 4.2e-130 468.4 297 75.4
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 5.5e-130 468.0 303 75.6
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 1.6e-129 466.5 304 74.0
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 1.6e-129 466.5 294 76.2
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 2.7e-129 465.7 295 75.9
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 3.6e-129 465.3 301 75.7
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 8.0e-129 464.2 297 74.7
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 1.4e-128 463.4 301 75.4
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 1.4e-128 463.4 304 74.0
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 1.8e-128 463.0 294 75.2
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 3.0e-128 462.2 297 75.1
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 3.9e-128 461.8 297 75.1
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 1.5e-127 459.9 303 74.6
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 2.0e-127 459.5 296 73.6
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 3.3e-127 458.8 303 75.2
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 4.4e-127 458.4 288 76.7
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 5.7e-127 458.0 321 70.7
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 7.4e-127 457.6 296 73.0
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 9.7e-127 457.2 297 73.7
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 9.7e-127 457.2 259 81.5
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 2.2e-126 456.1 302 72.8
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 2.8e-126 455.7 289 73.7
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 2.8e-126 455.7 289 73.4
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 4.8e-126 454.9 283 76.7
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 6.3e-126 454.5 301 75.1
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 8.2e-126 454.1 299 74.9
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 8.2e-126 454.1 307 72.6
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 1.4e-125 453.4 301 74.1
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 3.1e-125 452.2 303 71.9
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 3.1e-125 452.2 301 73.4
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 9.1e-125 450.7 278 75.5
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 3.5e-124 448.7 297 73.7
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 1.3e-123 446.8 287 72.8
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 1.3e-123 446.8 279 73.1
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 2.2e-123 446.0 303 70.6
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 8.5e-123 444.1 287 71.8
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 8.5e-123 444.1 305 69.8
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 2.5e-122 442.6 293 72.7
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 9.4e-122 440.7 280 71.1
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 3.6e-121 438.7 291 73.9
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 4.0e-120 435.3 306 70.9
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 5.2e-120 434.9 401 57.4
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 1.5e-119 433.3 296 68.9
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 1.4e-117 426.8 310 70.6
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 3.1e-117 425.6 302 69.9
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 8.5e-115 417.5 280 70.7
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 4.2e-114 415.2 254 78.3
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 7.2e-114 414.5 248 79.8
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 8.0e-113 411.0 293 69.3
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 8.0e-113 411.0 296 69.9
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 7.5e-111 404.4 277 70.8
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 2.2e-110 402.9 298 68.5
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 2.2e-110 402.9 298 68.5
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 2.8e-110 402.5 318 63.8
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 1.6e-105 386.7 239 76.6
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 2.8e-102 375.9 212 83.5
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 3.7e-102 375.6 265 67.5
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 6.6e-99 364.8 279 65.9
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 8.6e-99 364.4 263 63.1
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 2.1e-97 359.8 256 68.4
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 3.6e-97 359.0 211 80.6
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 2.9e-94 349.4 242 73.1
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 2.4e-93 346.3 202 79.2
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 2.7e-92 342.8 202 77.2
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 7.8e-92 341.3 248 69.4
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 9.9e-71 271.2 302 51.0
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 9.3e-69 264.6 265 50.6
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 3.5e-68 262.7 201 67.7
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 3.0e-67 259.6 259 51.4
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 3.1e-64 249.6 264 51.5
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 9.0e-56 221.5 262 46.9
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 9.9e-55 218.0 287 48.1
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 2.3e-51 206.8 172 61.6
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 2.8e-49 199.9 128 73.4
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 3.1e-48 196.4 112 86.6
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 8.4e-46 188.3 136 70.6
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 6.2e-41 172.2 97 83.5
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 4.5e-39 166.0 163 56.4
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 4.5e-31 139.4 81 75.3
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 3.2e-29 133.3 66 84.8
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 2.1e-28 130.6 100 63.0
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 1.7e-14 84.3 67 61.2
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 1.5e-13 81.3 56 66.1
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 2.4e-08 63.9 39 79.5
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 3.1e-08 63.5 33 81.8
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 3.1e-08 63.5 57 56.1
Cpa.g.sc3814.1 Carica papaya HOM05D006150 ORTHO05D007745 6.5e-06 55.8 39 66.7


User provided reference genes

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