Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6385 Papaver somniferum HOM05D003781 ORTHO05D004299 3.1e-173 611.7 308 100.0
PSO541G6247 Papaver somniferum HOM05D003781 ORTHO05D004299 1.1e-138 496.9 295 84.7
PSO675G8110 Papaver somniferum HOM05D003781 ORTHO05D004299 2.1e-137 492.7 295 84.1
TAR633G0070 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.8e-83 313.5 300 59.0
Dinv31756 Davidia involucrata HOM05D003781 ORTHO05D004299 1.5e-79 300.4 296 55.4
Nn2g14295 Nelumbo nucifera HOM05D003781 ORTHO05D004299 2.6e-79 299.7 298 53.7
TAR636G1975 Trochodendron aralioides HOM05D003781 ORTHO05D004299 3.4e-79 299.3 296 56.4
GSVIVG01037869001 Vitis vinifera HOM05D003781 ORTHO05D004299 9.4e-77 291.2 271 57.2
Dinv12337 Davidia involucrata HOM05D003781 ORTHO05D004299 4.6e-76 288.9 297 53.9
GSVIVG01029568001 Vitis vinifera HOM05D003781 ORTHO05D004299 3.9e-75 285.8 273 55.3
Nitab4.5_0001122g0140 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.7e-73 280.4 286 55.9
DCAR_009179 Daucus carota HOM05D003781 ORTHO05D004299 2.2e-73 280.0 255 57.6
MBI04_g47396_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 2.2e-73 280.0 312 50.6
Nitab4.5_0000020g0070 Nicotiana tabacum HOM05D003781 ORTHO05D004299 4.8e-73 278.9 286 55.9
Aqoxy1G00670 Aquilegia oxysepala HOM05D003781 ORTHO05D004299 1.8e-72 276.9 287 50.5
Actinidia03891 Actinidia chinensis HOM05D003781 ORTHO05D004299 3.1e-72 276.2 303 51.5
Actinidia04001 Actinidia chinensis HOM05D003781 ORTHO05D004299 3.1e-72 276.2 303 51.5
MBI04_g43653_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 4.1e-72 275.8 308 51.3
Peaxi162Scf00586g00012 Petunia axillaris HOM05D003781 ORTHO05D004299 1.2e-71 274.2 278 55.4
vmacro07475 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 3.4e-71 272.7 300 54.0
Cc06_g06510 Coffea canephora HOM05D003781 ORTHO05D004299 1.7e-70 270.4 264 56.1
Hma1.2p1_0064F.1_g034690 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 2.9e-70 269.6 314 48.1
CAN.G170.93 Capsicum annuum HOM05D003781 ORTHO05D004299 3.2e-69 266.2 281 53.0
Solyc01g007160.4 Solanum lycopersicum HOM05D003781 ORTHO05D004299 3.2e-69 266.2 307 49.5
Atru.chr8.1371 Acer truncatum HOM05D003781 ORTHO05D004299 2.1e-68 263.5 298 51.3
Sopen01g003140 Solanum pennellii HOM05D003781 ORTHO05D004299 4.7e-68 262.3 288 51.4
PGSC0003DMG400021351 Solanum tuberosum HOM05D003781 ORTHO05D004299 6.1e-68 261.9 297 50.8
Lsat_1_v5_gn_1_58161 Lactuca sativa HOM05D003781 ORTHO05D004299 1.4e-67 260.8 303 48.2
Oeu034092.2 Olea europaea HOM05D003781 ORTHO05D004299 2.3e-67 260.0 291 51.9
Ciclev10012131m.g Citrus clementina HOM05D003781 ORTHO05D004299 3.0e-67 259.6 278 51.1
Sabra16G0070900 Salix brachista HOM05D003781 ORTHO05D004299 1.1e-66 257.7 234 56.8
Sabra16G0073100 Salix brachista HOM05D003781 ORTHO05D004299 1.1e-66 257.7 234 56.8
Migut.J00706 Erythranthe guttata HOM05D003781 ORTHO05D004299 1.5e-66 257.3 291 48.1
Potri.016G070800 Populus trichocarpa HOM05D003781 ORTHO05D004299 1.5e-66 257.3 248 53.6
Hma1.2p1_0381F.1_g140000 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 2.0e-66 256.9 285 49.8
Sopen01g052480 Solanum pennellii HOM05D003781 ORTHO05D004299 2.0e-66 256.9 298 50.7
SalBow8G0162 Salvia bowleyana HOM05D003781 ORTHO05D004299 4.4e-66 255.8 286 50.7
HanXRQChr01g0025751 Helianthus annuus HOM05D003781 ORTHO05D004299 5.7e-66 255.4 296 48.6
Actinidia31110 Actinidia chinensis HOM05D003781 ORTHO05D004299 7.4e-66 255.0 222 59.5
MSTRG.5897 Avicennia marina HOM05D003781 ORTHO05D004299 7.4e-66 255.0 289 48.8
Solyc01g110330.3 Solanum lycopersicum HOM05D003781 ORTHO05D004299 9.7e-66 254.6 218 60.6
Lj2A35G43 Lonicera japonica HOM05D003781 ORTHO05D004299 4.8e-65 252.3 219 58.4
CSS0048701 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 6.3e-65 251.9 243 55.1
ECA248G2654 Erigeron canadensis HOM05D003781 ORTHO05D004299 8.2e-65 251.5 299 47.8
Eucgr.K02618 Eucalyptus grandis HOM05D003781 ORTHO05D004299 2.4e-64 250.0 261 53.6
Oeu052621.2 Olea europaea HOM05D003781 ORTHO05D004299 5.3e-64 248.8 216 56.0
ClCG10G018370 Citrullus lanatus HOM05D003781 ORTHO05D004299 7.0e-64 248.4 305 47.5
Duzib093G1220 Durio zibethinus HOM05D003781 ORTHO05D004299 7.0e-64 248.4 218 60.1
Lsat_1_v5_gn_6_113040 Lactuca sativa HOM05D003781 ORTHO05D004299 7.0e-64 248.4 219 57.5
Haze_20190 Corylus avellana HOM05D003781 ORTHO05D004299 1.2e-63 247.7 271 51.3
vmacro10320 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 1.5e-63 247.3 217 59.4
SGA_v2.0_scaffold13G06629 Striga asiatica HOM05D003781 ORTHO05D004299 4.5e-63 245.7 264 51.1
Prupe.7G095100 Prunus persica HOM05D003781 ORTHO05D004299 7.7e-63 245.0 256 52.3
TWI74G1316 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 1.0e-62 244.6 254 52.0
CDE06G0061 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 2.2e-62 243.4 304 46.7
Thecc.05G103800 Theobroma cacao HOM05D003781 ORTHO05D004299 2.9e-62 243.0 297 50.2
MD12G1039800 Malus domestica HOM05D003781 ORTHO05D004299 6.5e-62 241.9 257 51.8
Nitab4.5_0002858g0040 Nicotiana tabacum HOM05D003781 ORTHO05D004299 6.5e-62 241.9 297 51.5
AUR62036398 Chenopodium quinoa HOM05D003781 ORTHO05D004299 1.1e-61 241.1 256 50.0
Cpa.g.sc10.172 Carica papaya HOM05D003781 ORTHO05D004299 1.9e-61 240.4 277 48.4
Gohir.D09G131000 Gossypium hirsutum HOM05D003781 ORTHO05D004299 1.9e-61 240.4 218 57.3
Manes.08G033100 Manihot esculenta HOM05D003781 ORTHO05D004299 3.2e-61 239.6 260 51.5
TWI53G0607 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 3.2e-61 239.6 272 48.2
MELO3C009536.2 Cucumis melo HOM05D003781 ORTHO05D004299 4.2e-61 239.2 281 47.7
Sed0000357 Sechium edule HOM05D003781 ORTHO05D004299 4.2e-61 239.2 222 55.9
Gorai.006G149700 Gossypium raimondii HOM05D003781 ORTHO05D004299 5.5e-61 238.8 256 52.0
MD14G1038400 Malus domestica HOM05D003781 ORTHO05D004299 5.5e-61 238.8 256 50.8
CSS0029856 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 2.7e-60 236.5 243 53.5
PGR142G3230 Punica granatum HOM05D003781 ORTHO05D004299 3.6e-60 236.1 266 51.1
CsaV3_3G037920 Cucumis sativus L. HOM05D003781 ORTHO05D004299 4.7e-60 235.7 295 46.4
CANSAT01G0129 Cannabis sativa HOM05D003781 ORTHO05D004299 6.1e-60 235.3 278 46.4
Lalb_Chr18g0056351 Lupinus albus HOM05D003781 ORTHO05D004299 1.0e-59 234.6 275 46.2
Hund10883 Selenicereus undatus HOM05D003781 ORTHO05D004299 1.0e-59 234.6 215 56.3
FvH4_6g20270 Fragaria vesca HOM05D003781 ORTHO05D004299 1.4e-59 234.2 285 45.3
AUR62030753 Chenopodium quinoa HOM05D003781 ORTHO05D004299 1.8e-59 233.8 274 48.9
FAN14G3039 Fragaria x ananassa HOM05D003781 ORTHO05D004299 2.3e-59 233.4 285 44.9
Os04g0498900 Oryza sativa ssp. japonica HOM05D003781 ORTHO05D004299 2.3e-59 233.4 258 48.1
RcHm_v2.0_Chr1g0331051 Rosa chinensis HOM05D003781 ORTHO05D004299 2.3e-59 233.4 258 50.4
HanXRQChr16g0532941 Helianthus annuus HOM05D003781 ORTHO05D004299 5.2e-59 232.3 211 55.5
Ah.04g152350 Amaranthus hybridus HOM05D003781 ORTHO05D000148 8.8e-59 231.5 297 46.1
FAN02G2206 Fragaria x ananassa HOM05D003781 ORTHO05D004299 8.8e-59 231.5 286 45.1
RcHm_v2.0_Chr3g0475861 Rosa chinensis HOM05D003781 ORTHO05D004299 8.8e-59 231.5 258 49.6
ATR0772G111 Amborella trichopoda HOM05D003781 ORTHO05D004299 2.0e-58 230.3 216 52.3
CDE08G1154 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 2.6e-58 229.9 226 52.7
Rhsim09G0141200 Rhododendron simsii HOM05D003781 ORTHO05D004299 4.4e-58 229.2 315 43.5
QL04p047257 Quercus lobata HOM05D003781 ORTHO05D004299 9.7e-58 228.0 287 46.0
QL04p046781 Quercus lobata HOM05D003781 ORTHO05D004299 1.3e-57 227.6 287 47.0
QL07p036815 Quercus lobata HOM05D003781 ORTHO05D004299 1.3e-57 227.6 301 45.5
CiPaw.09G020700 Carya illinoinensis HOM05D003781 ORTHO05D004299 1.7e-57 227.3 213 55.9
Haze_19697 Corylus avellana HOM05D003781 ORTHO05D004299 6.3e-57 225.3 270 50.0
EL10Ac5g12476 Beta vulgaris HOM05D003781 ORTHO05D004299 1.1e-56 224.6 303 45.9
Psat5g299360 Pisum sativum HOM05D003781 ORTHO05D004299 2.4e-56 223.4 225 50.7
Rhsim03G0064900 Rhododendron simsii HOM05D003781 ORTHO05D004299 4.1e-56 222.6 301 48.2
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 7.0e-56 221.9 216 56.5
PGR142G3605 Punica granatum HOM05D003781 ORTHO05D004299 7.0e-56 221.9 288 47.2
A08p18640 Brassica napus HOM05D003781 ORTHO05D004299 9.1e-56 221.5 286 45.1
Ca_17838_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 1.2e-55 221.1 212 51.4
Lj1g0015362 Lotus japonicus HOM05D003781 ORTHO05D004299 1.6e-55 220.7 267 46.1
RhsimUnG0138100 Rhododendron simsii HOM05D003781 ORTHO05D004299 3.5e-55 219.5 216 54.2
Ca_03587_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 5.9e-55 218.8 262 43.5
Thhalv10027115m.g Eutrema salsugineum HOM05D003781 ORTHO05D004299 2.9e-54 216.5 248 49.2
Lj1A1051T45 Lonicera japonica HOM05D003781 ORTHO05D004299 2.9e-54 216.5 217 55.3
Zm00001eb078400 Zea mays HOM05D003781 ORTHO05D004299 2.9e-54 216.5 268 45.5
CARHR239280 Cardamine hirsuta HOM05D003781 ORTHO05D004299 3.8e-54 216.1 249 49.0
Zm00001eb078390 Zea mays HOM05D003781 ORTHO05D004299 3.8e-54 216.1 267 45.7
Zm00001eb078410 Zea mays HOM05D003781 ORTHO05D004299 3.8e-54 216.1 267 45.7
FAN05G1631 Fragaria x ananassa HOM05D003781 ORTHO05D004299 1.1e-53 214.5 330 38.8
FAN05G5379 Fragaria x ananassa HOM05D003781 ORTHO05D004299 1.1e-53 214.5 330 38.8
Sed0026509 Sechium edule HOM05D003781 ORTHO05D004299 1.1e-53 214.5 246 48.4
unitig_26.g10109 Utricularia gibba HOM05D003781 ORTHO05D004299 1.1e-53 214.5 257 46.7
arahy.Tifrunner.gnm1.ann1.WYX60D Arachis hypogaea HOM05D003781 ORTHO05D004299 1.5e-53 214.2 272 45.6
arahy.Tifrunner.gnm1.ann1.GQX3NW Arachis hypogaea HOM05D003781 ORTHO05D004299 2.5e-53 213.4 214 51.9
Medtr0036s0040 Medicago truncatula HOM05D003781 ORTHO05D004299 2.5e-53 213.4 263 44.1
FAN09G0267 Fragaria x ananassa HOM05D003781 ORTHO05D004299 3.2e-53 213.0 316 39.9
THA.LOC104809956 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 5.5e-53 212.2 224 52.2
Aa31LG2G18950 Aethionema arabicum HOM05D003781 ORTHO05D004299 1.6e-52 210.7 266 46.2
Phvul.001G195300 Phaseolus vulgaris HOM05D003781 ORTHO05D004299 1.6e-52 210.7 272 42.6
CiPaw.10G017000 Carya illinoinensis HOM05D003781 ORTHO05D004299 3.6e-52 209.5 214 54.7
BraA08t33827Z Brassica rapa HOM05D003781 ORTHO05D004299 8.0e-52 208.4 251 47.4
Nitab4.5_0008187g0010 Nicotiana tabacum HOM05D003781 ORTHO05D004299 8.0e-52 208.4 241 51.9
VMungo1383G2961 Vigna mungo HOM05D003781 ORTHO05D004299 3.0e-51 206.5 270 41.5
Sp7g29260 Schrenkiella parvula HOM05D003781 ORTHO05D004299 6.7e-51 205.3 290 44.5
VMungo0464G1804 Vigna mungo HOM05D003781 ORTHO05D004299 8.8e-51 204.9 262 43.5
AL7G20660 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 1.2e-50 204.5 281 45.6
A03p60680 Brassica napus HOM05D003781 ORTHO05D004299 1.5e-50 204.1 251 47.8
C07p58580 Brassica napus HOM05D003781 ORTHO05D004299 2.6e-50 203.4 293 44.0
BolC7t46313H Brassica oleracea HOM05D003781 ORTHO05D004299 2.6e-50 203.4 249 46.2
Glyma.19G200100 Glycine max HOM05D003781 ORTHO05D004299 7.5e-50 201.8 275 43.6
AUR62040627 Chenopodium quinoa HOM05D003781 ORTHO05D004299 1.3e-49 201.1 202 53.0
AT4G31400 Arabidopsis thaliana HOM05D003781 ORTHO05D004299 3.7e-49 199.5 284 41.9
BraA03t15109Z Brassica rapa HOM05D003781 ORTHO05D004299 3.7e-49 199.5 251 47.4
Glyma.19G199100 Glycine max HOM05D003781 ORTHO05D004299 4.8e-49 199.1 275 43.3
BcaB03g12691 Brassica carinata HOM05D003781 ORTHO05D004299 6.3e-49 198.7 248 46.4
Carub.0007s0916 Capsella rubella HOM05D003781 ORTHO05D004299 8.3e-49 198.4 248 46.4
BcaNung04576 Brassica carinata HOM05D003781 ORTHO05D004299 1.4e-48 197.6 290 42.4
BcaC01g01091 Brassica carinata HOM05D003781 ORTHO05D004299 3.1e-48 196.4 224 47.3
C03p88000 Brassica napus HOM05D003781 ORTHO05D004299 3.1e-48 196.4 224 47.3
Medtr2g102470 Medicago truncatula HOM05D003781 ORTHO05D004299 9.1e-48 194.9 223 45.3
TPR.G37223 Trifolium pratense HOM05D003781 ORTHO05D004299 9.1e-48 194.9 202 48.5
ATR1127G225 Amborella trichopoda HOM05D003781 ORTHO05D004299 2.0e-47 193.7 298 41.6
HPP92_023079 Vanilla planifolia HOM05D003781 ORTHO05D004299 2.7e-47 193.4 230 44.8
BolC3t21111H Brassica oleracea HOM05D003781 ORTHO05D004299 3.2e-45 186.4 225 48.4
Cc02_g09440 Coffea canephora HOM05D003781 ORTHO05D004299 3.6e-44 183.0 172 52.3
SEGI_09697 Sequoiadendron giganteum HOM05D003781 ORTHO05D004299 3.7e-41 172.9 254 37.0
Sc07g0006420 Simmondsia chinensis HOM05D003781 ORTHO05D004299 5.0e-38 162.5 212 47.2
HanXRQChr15g0472861 Helianthus annuus HOM05D003781 ORTHO05D004299 7.5e-34 148.7 160 48.8
Pp3c11_11100 Physcomitrium patens HOM05D003781 ORTHO05D004299 1.8e-32 144.1 246 37.4
BcaNung01523 Brassica carinata HOM05D003781 ORTHO05D004299 7.0e-32 142.1 188 44.1
SMO367G1200 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 1.6e-31 141.0 258 37.2
Gohir.A09G134500 Gossypium hirsutum HOM05D003781 ORTHO05D004299 4.5e-31 139.4 254 37.4
AagrBONN_evm.TU.Sc2ySwM_228.4048 Anthoceros agrestis HOM05D003781 ORTHO05D004299 5.0e-30 136.0 138 47.1
Mapoly0033s0057 Marchantia polymorpha HOM05D003781 ORTHO05D004299 3.3e-29 133.3 140 50.0
SGA_v2.0_scaffold31G12848 Striga asiatica HOM05D003781 ORTHO05D004299 4.3e-29 132.9 188 44.7
Actinidia06046 Actinidia chinensis HOM05D003781 ORTHO05D004299 1.2e-28 131.3 141 53.9
THA.LOC104816619 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 6.4e-25 119.0 161 44.7
RhsimUnG0138400 Rhododendron simsii HOM05D003781 ORTHO05D004299 1.1e-24 118.2 128 49.2
SMO343G0088 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 3.9e-22 109.8 158 39.9
AL1G32760 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 5.6e-21 105.9 124 50.0
Lsat_1_v5_gn_1_27721 Lactuca sativa HOM05D003781 ORTHO05D004299 3.6e-20 103.2 111 50.5
EL10Ac6g14086 Beta vulgaris HOM05D003781 ORTHO05D004299 1.8e-19 100.9 87 60.9
TAR629G3109 Trochodendron aralioides HOM05D003781 ORTHO05D004299 2.3e-19 100.5 101 54.5
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 4.0e-19 99.8 201 36.8
CBR_g51231 Chara braunii HOM05D003781 ORTHO05D004299 5.2e-19 99.4 114 43.0
Cre12.g542400 Chlamydomonas reinhardtii HOM05D003781 ORTHO05D004299 2.7e-15 87.0 113 40.7
PRCOL_00001992 Prasinoderma coloniale HOM05D003781 ORTHO05D004299 2.7e-15 87.0 163 31.3
ATR0772G001 Amborella trichopoda HOM05D003781 ORTHO05D004299 6.0e-15 85.9 102 46.1
CBR_g53714 Chara braunii HOM05D003781 ORTHO05D004299 2.3e-14 84.0 158 30.4
Gohir.D04G105401 Gossypium hirsutum HOM05D003781 ORTHO05D004299 5.1e-14 82.8 71 56.3
SGA_v2.0_scaffold522G52710 Striga asiatica HOM05D003781 ORTHO05D004299 5.1e-14 82.8 108 40.7
Gorai.005G179000 Gossypium raimondii HOM05D003781 ORTHO05D004299 1.5e-13 81.3 114 43.0
TPR.G33838 Trifolium pratense HOM05D003781 ORTHO05D004299 1.1e-11 75.1 111 40.5
HanXRQChr03g0072391 Helianthus annuus HOM05D003781 ORTHO05D004299 6.8e-11 72.4 161 32.9
TPR.G742 Trifolium pratense HOM05D003781 ORTHO05D004299 8.9e-11 72.0 78 48.7
MD10G1054000 Malus domestica HOM05D003781 ORTHO05D004299 7.5e-10 68.9 88 44.3
Nitab4.5_0001552g0060 Nicotiana tabacum HOM05D003781 ORTHO05D004299 2.2e-09 67.4 122 40.2
MCO12G060 Micromonas commoda HOM05D003781 ORTHO05D004299 4.9e-09 66.2 156 28.8
TPR.G38290 Trifolium pratense HOM05D010769 ORTHO05D011972 4.6e-07 59.7 55 50.9
TPR.G165 Trifolium pratense HOM05D003781 ORTHO05D004299 1.7e-06 57.8 56 48.2


User provided reference genes

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