Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 3.5e-105 385.2 224 100.0
PSO541G0804 Papaver somniferum HOM05D004728 ORTHO05D002375 7.8e-73 277.7 196 85.2
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 9.3e-18 94.7 201 47.3
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 8.7e-16 88.2 179 43.0
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 1.9e-15 87.0 123 53.7
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 2.5e-15 86.7 127 48.0
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 3.3e-15 86.3 185 40.5
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 4.3e-15 85.9 149 43.6
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.6e-14 84.0 122 53.3
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 3.7e-14 82.8 152 44.7
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 4.8e-14 82.4 107 44.9
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.2e-14 81.6 202 42.1
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 1.1e-13 81.3 174 39.7
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.8e-13 80.5 202 41.6
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.1e-13 79.7 202 41.1
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 5.3e-13 79.0 117 52.1
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 9.0e-13 78.2 126 54.0
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 1.2e-12 77.8 151 43.7
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 1.2e-12 77.8 174 40.8
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.5e-12 77.4 202 39.6
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 2.0e-12 77.0 112 56.2
Sabra02G0079600 Salix brachista HOM05D004728 ORTHO05D002375 2.0e-12 77.0 193 40.4
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 3.4e-12 76.3 161 42.9
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 3.4e-12 76.3 192 40.1
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.9e-12 75.5 140 49.3
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 7.7e-12 75.1 172 40.1
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.7e-11 73.9 143 44.8
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.7e-11 73.9 134 34.3
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 1.7e-11 73.9 140 49.3
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 2.9e-11 73.2 139 48.2
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.9e-11 73.2 143 43.4
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 3.8e-11 72.8 134 45.5
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 5.0e-11 72.4 147 43.5
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.5e-11 72.0 146 42.5
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 6.5e-11 72.0 137 49.6
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 6.5e-11 72.0 126 47.6
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 6.5e-11 72.0 164 41.5
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 1.9e-10 70.5 125 48.8
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.9e-10 70.5 137 46.0
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 2.5e-10 70.1 189 39.7
Duzib093G1766 Durio zibethinus HOM05D004728 ORTHO05D002375 3.2e-10 69.7 115 53.9
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 3.2e-10 69.7 147 30.6
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 4.2e-10 69.3 181 38.7
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.2e-10 69.3 119 52.9
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.5e-10 68.9 116 33.6
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.5e-10 68.9 116 33.6
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 7.2e-10 68.6 150 44.7
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 1.2e-09 67.8 139 33.1
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.2e-09 67.8 133 47.4
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.2e-09 67.8 202 32.7
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 1.2e-09 67.8 189 35.4
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 1.2e-09 67.8 158 41.8
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.6e-09 67.4 134 47.0
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.6e-09 67.4 202 34.2
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 1.6e-09 67.4 154 32.5
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.6e-09 67.4 103 54.4
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 2.1e-09 67.0 203 37.9
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.7e-09 66.6 130 43.8
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.6e-09 66.2 133 45.1
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.6e-09 65.9 145 34.5
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 4.6e-09 65.9 127 44.1
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 4.6e-09 65.9 159 40.9
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 6.1e-09 65.5 187 36.9
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.1e-09 65.5 187 36.9
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 6.1e-09 65.5 111 54.1
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 7.9e-09 65.1 179 36.3
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 1.4e-08 64.3 123 48.8
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 1.4e-08 64.3 183 35.5
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.8e-08 63.9 126 39.7
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 1.8e-08 63.9 124 41.9
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 3.0e-08 63.2 129 45.7
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 3.9e-08 62.8 108 36.1
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 3.9e-08 62.8 211 32.2
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 3.9e-08 62.8 123 45.5
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 5.1e-08 62.4 121 34.7
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 6.7e-08 62.0 121 47.9
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 8.8e-08 61.6 164 39.6
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 8.8e-08 61.6 189 38.1
Thecc.08G100800 Theobroma cacao HOM05D004728 ORTHO05D002375 8.8e-08 61.6 191 39.3
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 1.1e-07 61.2 111 46.8
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 1.1e-07 61.2 117 46.2
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 1.5e-07 60.8 129 45.7
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.5e-07 60.8 145 39.3
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.5e-07 60.8 109 31.2
Gohir.A05G223000 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.5e-07 60.8 127 44.9
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 1.5e-07 60.8 153 43.8
Lsat_1_v5_gn_1_2980 Lactuca sativa HOM05D004728 ORTHO05D002375 2.0e-07 60.5 184 35.9
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 2.0e-07 60.5 162 42.0
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 3.3e-07 59.7 127 31.5
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.3e-07 59.7 147 38.1
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 3.3e-07 59.7 125 45.6
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 4.4e-07 59.3 147 38.1
Gohir.D05G225700 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.4e-07 59.3 98 53.1
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 5.7e-07 58.9 148 37.2
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 5.7e-07 58.9 135 42.2
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 5.7e-07 58.9 103 46.6
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 5.7e-07 58.9 187 31.6
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 7.4e-07 58.5 169 38.5
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 7.4e-07 58.5 169 38.5
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 9.7e-07 58.2 197 35.0
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 1.3e-06 57.8 153 34.0
FAN08G2352 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.7e-06 57.4 104 47.1
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 2.2e-06 57.0 159 37.1
MD15G1317500 Malus domestica HOM05D004728 ORTHO05D002375 2.2e-06 57.0 81 44.4
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 2.2e-06 57.0 120 43.3
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 2.2e-06 57.0 120 40.8
Hund23288 Selenicereus undatus HOM05D004728 ORTHO05D002375 2.2e-06 57.0 176 31.8
Solyc04g074770.2 Solanum lycopersicum HOM05D012586 ORTHO05D012196 2.2e-06 57.0 203 37.4
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 2.8e-06 56.6 218 31.7
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 2.8e-06 56.6 166 39.2
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 2.8e-06 56.6 165 26.7
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 3.7e-06 56.2 134 32.8
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 4.8e-06 55.8 118 45.8
FAN13G0425 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.8e-06 55.8 148 37.2
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 6.3e-06 55.5 170 35.3
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 6.3e-06 55.5 98 45.9
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 8.2e-06 55.1 120 44.2
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 8.2e-06 55.1 172 30.2
PGSC0003DMG400030842 Solanum tuberosum HOM05D012586 ORTHO05D012196 8.2e-06 55.1 156 41.0


User provided reference genes

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