Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 1.8e-73 279.6 193 100.0
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 6.3e-71 271.2 192 97.4
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.0e-41 174.1 130 69.2
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.4e-41 173.7 123 71.5
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.6e-40 169.5 132 68.9
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 5.4e-38 161.8 132 65.9
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 2.0e-37 159.8 121 66.9
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.3e-36 157.1 132 63.6
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.7e-36 156.8 126 65.9
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.7e-36 156.8 131 63.4
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 2.3e-36 156.4 131 64.9
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 5.0e-36 155.2 133 65.4
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 8.6e-36 154.5 126 65.1
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 8.6e-36 154.5 122 64.8
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.5e-35 152.9 124 65.3
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 2.5e-35 152.9 124 65.3
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 3.3e-35 152.5 130 63.8
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 4.2e-35 152.1 121 65.3
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 9.5e-35 151.0 126 62.7
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 9.5e-35 151.0 126 63.5
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 1.2e-34 150.6 135 61.5
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 2.1e-34 149.8 128 64.1
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 4.7e-34 148.7 127 65.4
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 4.7e-34 148.7 127 65.4
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 6.1e-34 148.3 127 64.6
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.8e-33 146.7 136 62.5
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 3.0e-33 146.0 118 66.9
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 4.0e-33 145.6 134 59.7
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 4.0e-33 145.6 126 62.7
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 4.0e-33 145.6 126 61.1
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 4.0e-33 145.6 122 62.3
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 6.8e-33 144.8 128 64.1
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 8.9e-33 144.4 100 72.0
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.2e-32 144.1 125 63.2
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 2.0e-32 143.3 125 63.2
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 3.4e-32 142.5 117 65.8
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 3.4e-32 142.5 122 62.3
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 3.4e-32 142.5 122 59.0
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 3.4e-32 142.5 126 61.1
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 4.4e-32 142.1 137 59.9
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 4.4e-32 142.1 127 61.4
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 4.4e-32 142.1 134 61.9
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 7.5e-32 141.4 121 63.6
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 9.8e-32 141.0 111 67.6
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 9.8e-32 141.0 118 65.3
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 9.8e-32 141.0 118 65.3
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 9.8e-32 141.0 117 65.0
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.3e-31 140.6 130 60.0
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 1.3e-31 140.6 125 63.2
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.7e-31 140.2 112 67.9
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.7e-31 140.2 134 61.2
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 2.8e-31 139.4 133 57.9
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 3.7e-31 139.0 122 63.1
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 4.9e-31 138.7 134 59.0
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 1.1e-30 137.5 124 59.7
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.1e-30 137.5 121 65.3
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 1.1e-30 137.5 117 62.4
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.4e-30 137.1 120 58.3
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.4e-30 137.1 125 61.6
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.4e-30 137.1 125 61.6
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.4e-30 137.1 125 61.6
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.8e-30 136.7 130 58.5
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.8e-30 136.7 130 58.5
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.8e-30 136.7 130 58.5
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 1.8e-30 136.7 121 62.0
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 1.8e-30 136.7 122 62.3
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 2.4e-30 136.3 130 57.7
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 2.4e-30 136.3 125 60.8
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 2.4e-30 136.3 127 56.7
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 3.2e-30 136.0 137 58.4
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 4.1e-30 135.6 134 58.2
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 5.4e-30 135.2 131 56.5
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 9.2e-30 134.4 126 57.1
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 9.2e-30 134.4 126 57.1
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 9.2e-30 134.4 113 64.6
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 9.2e-30 134.4 125 60.8
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.2e-29 134.0 125 57.6
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.6e-29 133.7 118 63.6
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 1.6e-29 133.7 164 48.8
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 2.0e-29 133.3 111 64.9
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 2.7e-29 132.9 112 66.1
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 4.6e-29 132.1 129 55.0
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 4.6e-29 132.1 129 55.0
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 5.9e-29 131.7 122 58.2
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 7.8e-29 131.3 117 65.0
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 7.8e-29 131.3 104 66.3
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.0e-28 131.0 132 59.1
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.9e-28 129.4 89 74.2
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 2.9e-28 129.4 128 57.0
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 5.0e-28 128.6 118 61.9
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 5.0e-28 128.6 118 61.9
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 5.0e-28 128.6 118 61.9
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 6.6e-28 128.3 118 61.9
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 1.1e-27 127.5 126 54.8
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 1.5e-27 127.1 127 55.9
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 1.5e-27 127.1 83 73.5
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.5e-27 127.1 128 57.8
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 2.5e-27 126.3 80 77.5
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 3.3e-27 125.9 91 68.1
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 5.6e-27 125.2 120 55.8
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 5.6e-27 125.2 183 43.7
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 7.3e-27 124.8 120 55.8
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 9.5e-27 124.4 127 57.5
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 9.5e-27 124.4 159 47.8
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 2.1e-26 123.2 114 60.5
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 2.1e-26 123.2 123 54.5
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 3.6e-26 122.5 95 68.4
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 1.0e-25 120.9 114 61.4
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.0e-25 120.9 77 75.3
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 8.9e-25 117.9 120 60.0
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 1.5e-24 117.1 81 74.1
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 5.8e-24 115.2 96 67.7
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 5.8e-24 115.2 122 54.1
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 1.7e-23 113.6 178 42.7
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 2.2e-23 113.2 118 55.1
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 3.7e-23 112.5 122 52.5
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 3.7e-23 112.5 156 46.2
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 6.6e-20 101.7 137 46.0
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 1.2e-18 97.4 86 58.1
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.2e-18 97.4 79 62.0
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 3.6e-18 95.9 82 64.6
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.4e-17 94.0 89 59.6
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 5.4e-14 82.0 96 50.0
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.7e-13 79.7 112 42.0
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 4.6e-13 79.0 79 53.2
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 1.0e-12 77.8 235 30.2
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 3.0e-12 76.3 78 53.8
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 1.8e-09 67.0 133 42.1
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 7.6e-08 61.6 44 68.2
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 2.2e-07 60.1 65 49.2
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 2.4e-06 56.6 75 41.3
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 5.4e-06 55.5 53 50.9


User provided reference genes

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