Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 4.6e-183 644.4 325 100.0
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 7.9e-175 617.1 325 94.8
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 1.5e-138 496.5 322 77.0
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 3.4e-138 495.4 323 77.4
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 7.2e-136 487.6 331 74.9
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 7.0e-131 471.1 326 72.4
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 5.0e-129 464.9 328 71.6
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 5.0e-129 464.9 323 72.4
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 9.4e-128 460.7 334 71.6
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 1.6e-127 459.9 328 72.6
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 8.0e-127 457.6 326 70.2
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 1.0e-126 457.2 324 69.8
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 1.8e-126 456.4 324 69.4
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 1.8e-126 456.4 327 70.3
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 1.8e-126 456.4 322 70.2
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 2.3e-126 456.1 322 70.2
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 4.0e-126 455.3 329 70.8
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 5.2e-126 454.9 326 69.9
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 8.8e-126 454.1 324 71.9
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 1.1e-125 453.8 327 70.3
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 2.0e-125 453.0 328 71.0
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 4.4e-125 451.8 327 69.7
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 7.5e-125 451.1 324 69.4
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 9.7e-125 450.7 326 69.0
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 1.7e-124 449.9 330 70.3
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 3.7e-124 448.7 327 69.7
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 8.2e-124 447.6 324 71.3
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 4.1e-123 445.3 323 69.0
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 1.6e-122 443.4 326 69.3
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.6e-122 443.4 323 68.1
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 3.5e-122 442.2 322 67.7
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 3.5e-122 442.2 327 69.4
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 1.0e-121 440.7 327 68.2
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.0e-121 440.7 321 69.2
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 1.0e-121 440.7 324 68.2
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 2.2e-121 439.5 325 67.7
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 2.9e-121 439.1 331 67.4
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 2.9e-121 439.1 324 67.6
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 6.5e-121 438.0 326 68.4
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 8.5e-121 437.6 326 69.6
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.1e-120 437.2 329 67.5
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 1.1e-120 437.2 324 66.7
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.2e-120 435.6 329 68.7
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 5.5e-120 434.9 324 68.2
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 7.2e-120 434.5 325 68.0
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 7.2e-120 434.5 327 67.3
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 7.2e-120 434.5 333 67.9
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 9.4e-120 434.1 328 68.3
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 9.4e-120 434.1 324 66.4
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 9.4e-120 434.1 333 67.6
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 9.4e-120 434.1 333 67.6
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.6e-119 433.3 327 67.3
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 2.7e-119 432.6 327 68.8
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 3.6e-119 432.2 326 66.9
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 4.7e-119 431.8 323 66.9
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 6.1e-119 431.4 326 65.6
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 8.0e-119 431.0 331 67.4
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 8.0e-119 431.0 331 67.4
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 1.0e-118 430.6 327 67.0
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 1.8e-118 429.9 325 67.7
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 2.3e-118 429.5 328 67.4
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 2.3e-118 429.5 324 66.0
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 2.3e-118 429.5 324 66.7
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 3.0e-118 429.1 324 66.0
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 3.0e-118 429.1 331 68.6
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 5.2e-118 428.3 327 66.4
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 2.0e-117 426.4 322 65.8
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 2.6e-117 426.0 330 65.8
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 3.4e-117 425.6 324 68.5
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 4.4e-117 425.2 333 65.5
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 4.4e-117 425.2 317 67.2
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 9.8e-117 424.1 333 65.5
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 9.8e-117 424.1 326 66.3
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 9.8e-117 424.1 324 68.5
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 1.7e-116 423.3 327 66.7
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 2.8e-116 422.5 325 65.8
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 2.8e-116 422.5 333 65.8
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.8e-116 422.5 333 66.7
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 2.8e-116 422.5 329 66.9
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.7e-116 422.2 333 65.8
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 6.3e-116 421.4 328 66.2
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 6.3e-116 421.4 325 66.2
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 8.3e-116 421.0 334 65.0
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 1.1e-115 420.6 335 64.5
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.4e-115 419.5 333 66.1
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 5.4e-115 418.3 290 71.7
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 9.1e-115 417.5 334 65.3
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 2.7e-114 416.0 326 66.3
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.7e-114 416.0 324 67.0
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 3.5e-114 415.6 353 62.9
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 5.9e-114 414.8 326 66.0
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 5.0e-113 411.8 324 63.9
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 2.5e-112 409.5 327 64.5
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 4.2e-112 408.7 324 64.2
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 7.2e-112 407.9 353 62.6
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 1.2e-111 407.1 323 63.8
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 1.0e-110 404.1 361 59.6
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 3.4e-109 399.1 318 65.7
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 1.3e-108 397.1 323 62.8
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 1.3e-108 397.1 501 47.3
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 1.4e-107 393.7 333 62.8
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 2.5e-104 382.9 260 73.1
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 1.6e-103 380.2 262 69.1
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 8.0e-103 377.9 260 70.8
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 2.7e-98 362.8 290 63.1
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 1.3e-97 360.5 382 50.8
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 7.3e-96 354.8 329 57.4
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 1.9e-83 313.5 267 57.3
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.6e-79 300.4 185 80.0
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 4.0e-78 295.8 187 79.1
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 6.8e-78 295.0 264 55.3
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 2.0e-77 293.5 175 81.1
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 9.9e-77 291.2 170 84.1
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.9e-76 289.7 208 71.2
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 1.9e-75 287.0 178 79.8
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 3.6e-71 272.7 167 79.6
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 5.4e-67 258.8 211 64.9
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 5.1e-57 225.7 187 62.0
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.7e-52 210.7 187 60.4
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 1.2e-50 204.5 123 81.3
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 7.4e-48 195.3 121 79.3
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 9.6e-48 194.9 134 66.4
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.4e-46 190.3 121 76.9
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 2.0e-45 187.2 120 75.0
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 4.5e-45 186.0 152 66.4
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 6.0e-42 175.6 115 73.9
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.9e-36 156.8 121 67.8
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.7e-34 150.2 95 80.0
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 1.3e-20 104.8 73 71.2
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 1.1e-14 85.1 125 41.6
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 5.5e-11 72.8 157 33.1
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 2.7e-10 70.5 48 70.8
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 8.0e-10 68.9 180 30.0
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 1.3e-07 61.6 175 26.3
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 1.1e-06 58.5 184 28.8
PRCOL_00003044 Prasinoderma coloniale HOM05D024924 ORTHO05D006483 7.0e-06 55.8 143 28.0


User provided reference genes

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