Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5794 Papaver somniferum HOM05D003860 ORTHO05D004218 1.7e-184 651.4 371 100.0
PSO386G0262 Papaver somniferum HOM05D003860 ORTHO05D004218 6.9e-101 373.6 280 67.1
PSO724G0870 Papaver somniferum HOM05D003860 ORTHO05D004218 1.7e-99 369.0 280 66.4
PSO210G3069 Papaver somniferum HOM05D003860 ORTHO05D004218 1.6e-73 282.7 210 61.9
PSO832G4205 Papaver somniferum HOM05D003860 ORTHO05D004218 1.0e-72 280.0 210 61.0
PSO170G3926 Papaver somniferum HOM05D003860 ORTHO05D004218 9.1e-69 266.9 226 56.2
PSO063G5549 Papaver somniferum HOM05D003860 ORTHO05D004218 5.5e-66 257.7 200 57.5
PSO386G0027 Papaver somniferum HOM05D003860 ORTHO05D004218 1.3e-59 236.5 224 52.7
PSO724G0326 Papaver somniferum HOM05D003860 ORTHO05D004218 5.0e-59 234.6 287 42.9
Nn1g02668 Nelumbo nucifera HOM05D003860 ORTHO05D004218 2.1e-57 229.2 195 56.9
Sc19g0003450 Simmondsia chinensis HOM05D003860 ORTHO05D004218 1.7e-54 219.5 219 48.4
TAR365G0731 Trochodendron aralioides HOM05D003860 ORTHO05D004218 2.2e-54 219.2 203 52.7
CSS0040755 Camellia sinensis var. sinensis HOM05D003860 ORTHO05D004218 8.3e-54 217.2 271 43.5
Actinidia05456 Actinidia chinensis HOM05D003860 ORTHO05D004218 1.8e-53 216.1 269 42.4
Dinv29898 Davidia involucrata HOM05D003860 ORTHO05D004218 1.8e-53 216.1 204 52.5
RcHm_v2.0_Chr5g0051721 Rosa chinensis HOM05D003860 ORTHO05D004218 2.4e-53 215.7 205 52.2
Atru.chr4.2181 Acer truncatum HOM05D003860 ORTHO05D004218 2.0e-52 212.6 237 46.8
Lj3C795G8 Lonicera japonica HOM05D003860 ORTHO05D004218 1.0e-51 210.3 296 40.2
MBI01_g26745_MAGBIO Magnolia biondii HOM05D003860 ORTHO05D004218 1.0e-51 210.3 233 45.1
Prupe.1G033500 Prunus persica HOM05D003860 ORTHO05D004218 1.0e-51 210.3 191 50.8
RcHm_v2.0_Chr7g0211841 Rosa chinensis HOM05D003860 ORTHO05D004218 1.7e-51 209.5 283 41.3
Aqoxy2G03595 Aquilegia oxysepala HOM05D003860 ORTHO05D004218 3.9e-51 208.4 213 48.8
CDE02G3490 Ceratophyllum demersum HOM05D003860 ORTHO05D004218 5.0e-51 208.0 176 52.3
PGR004G1248 Punica granatum HOM05D003860 ORTHO05D004218 5.0e-51 208.0 190 51.1
RcHm_v2.0_Chr4g0391121 Rosa chinensis HOM05D003860 ORTHO05D004218 8.6e-51 207.2 209 48.3
TWI09G0161 Tripterygium wilfordii HOM05D003860 ORTHO05D004218 2.5e-50 205.7 207 47.8
Hund04555 Selenicereus undatus HOM05D003860 ORTHO05D004218 4.3e-50 204.9 243 44.4
FAN25G1720 Fragaria x ananassa HOM05D003860 ORTHO05D004218 5.6e-50 204.5 194 50.5
Lsat_1_v5_gn_5_71460 Lactuca sativa HOM05D003860 ORTHO05D004218 7.3e-50 204.1 199 48.7
arahy.Tifrunner.gnm1.ann1.IPZV7K Arachis hypogaea HOM05D003860 ORTHO05D004218 1.6e-49 203.0 194 48.5
FAN21G0272 Fragaria x ananassa HOM05D003860 ORTHO05D004218 2.1e-49 202.6 196 50.5
FvH4_3g28990 Fragaria vesca HOM05D003860 ORTHO05D004218 2.8e-49 202.2 205 48.3
Lalb_Chr03g0043921 Lupinus albus HOM05D003860 ORTHO05D004218 2.8e-49 202.2 191 52.9
vmacro08440 Vaccinium macrocarpon HOM05D003860 ORTHO05D004218 4.7e-49 201.4 180 52.2
GSVIVG01018132001 Vitis vinifera HOM05D003860 ORTHO05D004218 1.0e-48 200.3 194 49.0
FAN11G1859 Fragaria x ananassa HOM05D003860 ORTHO05D004218 1.4e-48 199.9 205 47.8
arahy.Tifrunner.gnm1.ann1.5VC0H5 Arachis hypogaea HOM05D003860 ORTHO05D004218 2.3e-48 199.1 192 47.4
Thecc.04G247900 Theobroma cacao HOM05D003860 ORTHO05D004218 2.3e-48 199.1 188 50.0
AUR62015467 Chenopodium quinoa HOM05D003860 ORTHO05D004218 3.1e-48 198.7 271 40.2
MSTRG.9921 Avicennia marina HOM05D003860 ORTHO05D004218 4.0e-48 198.4 212 49.5
Gohir.D04G018000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 2.6e-47 195.7 189 48.7
Gorai.012G021000 Gossypium raimondii HOM05D003860 ORTHO05D004218 2.6e-47 195.7 189 48.7
Nitab4.5_0000436g0080 Nicotiana tabacum HOM05D003860 ORTHO05D004218 2.6e-47 195.7 193 46.1
Potri.008G163500 Populus trichocarpa HOM05D003860 ORTHO05D004218 2.6e-47 195.7 221 46.2
Phvul.002G055200 Phaseolus vulgaris HOM05D003860 ORTHO05D004218 3.4e-47 195.3 194 49.5
GSVIVG01017372001 Vitis vinifera HOM05D003860 ORTHO05D004218 3.4e-47 195.3 182 51.1
Glyma.12G000500 Glycine max HOM05D003860 ORTHO05D004218 4.4e-47 194.9 198 48.5
TPR.G34114 Trifolium pratense HOM05D003860 ORTHO05D004218 5.8e-47 194.5 201 46.3
CANSAT78G0297 Cannabis sativa HOM05D003860 ORTHO05D004218 7.5e-47 194.1 238 42.4
Cc03_g05000 Coffea canephora HOM05D003860 ORTHO05D004218 9.8e-47 193.7 195 47.2
Lsat_1_v5_gn_5_72601 Lactuca sativa HOM05D003860 ORTHO05D004218 1.3e-46 193.4 212 45.3
Rhsim04G0189100 Rhododendron simsii HOM05D003860 ORTHO05D004218 2.9e-46 192.2 197 45.7
Gohir.A05G398000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 3.7e-46 191.8 220 44.5
Sabra08G0124700 Salix brachista HOM05D003860 ORTHO05D004218 6.4e-46 191.0 192 48.4
Lsat_1_v5_gn_5_72621 Lactuca sativa HOM05D003860 ORTHO05D004218 8.3e-46 190.7 195 48.2
MD16G1211400 Malus domestica HOM05D003860 ORTHO05D004218 1.1e-45 190.3 190 47.9
Lj3g0013538 Lotus japonicus HOM05D003860 ORTHO05D004218 5.4e-45 188.0 189 50.3
Nitab4.5_0003331g0100 Nicotiana tabacum HOM05D003860 ORTHO05D004218 9.2e-45 187.2 193 44.0
Hund11859 Selenicereus undatus HOM05D003860 ORTHO05D004218 1.2e-44 186.8 182 47.8
Peaxi162Scf00019g03122 Petunia axillaris HOM05D003860 ORTHO05D004218 1.6e-44 186.4 201 43.3
THA.LOC104798705 Tarenaya hassleriana HOM05D003860 ORTHO05D004218 1.6e-44 186.4 191 46.6
PGSC0003DMG400013397 Solanum tuberosum HOM05D003860 ORTHO05D004218 7.8e-44 184.1 193 45.1
CAN.G638.70 Capsicum annuum HOM05D003860 ORTHO05D004218 3.0e-43 182.2 195 42.6
Oeu008802.1 Olea europaea HOM05D003860 ORTHO05D004218 3.0e-43 182.2 203 44.3
Sopen03g001470 Solanum pennellii HOM05D003860 ORTHO05D004218 3.9e-43 181.8 264 38.3
Eucgr.H03148 Eucalyptus grandis HOM05D003860 ORTHO05D004218 5.0e-43 181.4 205 47.3
Medtr4g032190 Medicago truncatula HOM05D003860 ORTHO05D004218 5.0e-43 181.4 195 44.6
Psat7g227280 Pisum sativum HOM05D003860 ORTHO05D004218 6.6e-43 181.0 214 43.9
SalBow6G3557 Salvia bowleyana HOM05D003860 ORTHO05D004218 6.6e-43 181.0 173 49.7
Solyc03g005440.3 Solanum lycopersicum HOM05D003860 ORTHO05D004218 8.6e-43 180.6 193 43.0
SalBow2G1275 Salvia bowleyana HOM05D003860 ORTHO05D004218 1.5e-42 179.9 191 47.6
MELO3C026783.2 Cucumis melo HOM05D003860 ORTHO05D004218 3.3e-42 178.7 196 47.4
QL06p016008 Quercus lobata HOM05D003860 ORTHO05D004218 4.3e-42 178.3 223 43.5
Zm00001eb108590 Zea mays HOM05D003860 ORTHO05D004218 1.2e-41 176.8 201 42.3
EL10Ac3g05899 Beta vulgaris HOM05D003860 ORTHO05D004218 2.8e-41 175.6 298 33.9
Ah.07g207450 Amaranthus hybridus HOM05D003860 ORTHO05D004218 4.7e-41 174.9 187 43.9
Peaxi162Scf00204g00115 Petunia axillaris HOM05D003860 ORTHO05D004218 1.4e-40 173.3 210 42.9
SalBow2G2538 Salvia bowleyana HOM05D003860 ORTHO05D004218 1.4e-40 173.3 246 41.5
Duzib114G0251 Durio zibethinus HOM05D003860 ORTHO05D004218 1.8e-40 172.9 208 41.8
HPP92_016098 Vanilla planifolia HOM05D003860 ORTHO05D004218 4.0e-40 171.8 247 40.1
DCAR_027287 Daucus carota HOM05D003860 ORTHO05D004218 5.2e-40 171.4 212 44.3
ECA233G4435 Erigeron canadensis HOM05D003860 ORTHO05D004218 6.8e-40 171.0 193 44.0
Sed0002683 Sechium edule HOM05D003860 ORTHO05D004218 8.9e-40 170.6 244 41.0
HanXRQChr12g0378901 Helianthus annuus HOM05D003860 ORTHO05D004218 5.8e-39 167.9 174 44.3
CARHR265010 Cardamine hirsuta HOM05D003860 ORTHO05D004218 1.3e-38 166.8 218 39.9
HanXRQChr12g0386161 Helianthus annuus HOM05D003860 ORTHO05D004218 3.7e-38 165.2 175 45.1
Haze_11316 Corylus avellana HOM05D003860 ORTHO05D004218 6.4e-38 164.5 271 38.4
Rhsim02G0034600 Rhododendron simsii HOM05D003860 ORTHO05D004218 3.2e-37 162.2 335 35.2
Sopen09g032490 Solanum pennellii HOM05D003860 ORTHO05D004218 5.4e-37 161.4 211 37.9
AT5G42670 Arabidopsis thaliana HOM05D003860 ORTHO05D004218 1.2e-36 160.2 207 40.6
Aa31LG3G8460 Aethionema arabicum HOM05D003860 ORTHO05D004218 1.7e-35 156.4 224 38.4
Carub.0008s0633 Capsella rubella HOM05D003860 ORTHO05D004218 2.3e-35 156.0 191 39.8
Sp2g07130 Schrenkiella parvula HOM05D003860 ORTHO05D004218 2.3e-35 156.0 194 41.2
Carub.0008s1217 Capsella rubella HOM05D003860 ORTHO05D004218 8.6e-35 154.1 210 38.1
CiPaw.02G115700 Carya illinoinensis HOM05D003860 ORTHO05D004218 8.6e-35 154.1 222 38.3
Thhalv10014347m.g Eutrema salsugineum HOM05D003860 ORTHO05D004218 1.5e-34 153.3 220 35.0
Haze_11318 Corylus avellana HOM05D003860 ORTHO05D004218 1.9e-34 152.9 151 52.3
SpUn0060_0020 Schrenkiella parvula HOM05D003860 ORTHO05D004218 1.9e-34 152.9 204 36.8
Solyc09g089570.4 Solanum lycopersicum HOM05D003860 ORTHO05D004218 2.5e-34 152.5 179 39.1
AL8G26450 Arabidopsis lyrata HOM05D003860 ORTHO05D004218 3.3e-34 152.1 192 38.5
CARHR156760 Cardamine hirsuta HOM05D003860 ORTHO05D004218 3.3e-34 152.1 198 41.4
AL8G18530 Arabidopsis lyrata HOM05D003860 ORTHO05D004218 4.3e-34 151.8 227 35.7
BraA03t10876Z Brassica rapa HOM05D003860 ORTHO05D004218 7.3e-34 151.0 189 39.7
Peaxi162Scf00024g00515 Petunia axillaris HOM05D003860 ORTHO05D004218 7.3e-34 151.0 234 38.9
HanXRQChr16g0514681 Helianthus annuus HOM05D003860 ORTHO05D004218 1.6e-33 149.8 164 40.9
BcaC01g06158 Brassica carinata HOM05D003860 ORTHO05D004218 4.7e-33 148.3 189 39.7
BcaB01g04181 Brassica carinata HOM05D003860 ORTHO05D004218 8.9e-32 144.1 214 37.9
Ca_19732_v3 Cicer arietinum L. HOM05D003860 ORTHO05D004218 1.5e-31 143.3 133 50.4
Nitab4.5_0009720g0020 Nicotiana tabacum HOM05D003860 ORTHO05D004218 2.0e-31 142.9 255 30.6
BcaB07g31066 Brassica carinata HOM05D003860 ORTHO05D004218 3.4e-31 142.1 199 39.7
BcaB07g31067 Brassica carinata HOM05D003860 ORTHO05D004218 3.4e-31 142.1 199 39.7
PGSC0003DMG400017259 Solanum tuberosum HOM05D003860 ORTHO05D004218 9.9e-31 140.6 223 32.7
A09p19840 Brassica napus HOM05D003860 ORTHO05D004218 1.7e-30 139.8 200 39.5
BraA09t37590Z Brassica rapa HOM05D003860 ORTHO05D004218 1.7e-30 139.8 196 39.8
BolC9t55408H Brassica oleracea HOM05D003860 ORTHO05D004218 2.2e-30 139.4 188 40.4
Os05g0140600 Oryza sativa ssp. japonica HOM05D003860 ORTHO05D004218 2.9e-30 139.0 160 43.8
PSO063G7105 Papaver somniferum HOM05D010112 ORTHO05D000002 3.7e-30 138.7 98 80.6
unitig_32.g10833 Utricularia gibba HOM05D003860 ORTHO05D004218 3.7e-30 138.7 195 39.5
BcaB01g04182 Brassica carinata HOM05D003860 ORTHO05D004218 4.9e-30 138.3 192 37.5
BcaC04g21988 Brassica carinata HOM05D003860 ORTHO05D004218 1.1e-29 137.1 190 40.0
C09p25140 Brassica napus HOM05D003860 ORTHO05D004218 1.1e-29 137.1 190 40.0
BcaC06g31848 Brassica carinata HOM05D003860 ORTHO05D004218 1.4e-29 136.7 170 40.6
COL.COLO4_20681 Corchorus olitorius HOM05D003860 ORTHO05D004218 1.9e-29 136.3 211 36.5
A02p11970 Brassica napus HOM05D003860 ORTHO05D004218 2.4e-29 136.0 183 37.7
C02p19970 Brassica napus HOM05D003860 ORTHO05D004218 2.4e-29 136.0 174 37.9
BolC2t08132H Brassica oleracea HOM05D003860 ORTHO05D004218 2.4e-29 136.0 174 37.9
BraA02t06261Z Brassica rapa HOM05D003860 ORTHO05D004218 4.1e-29 135.2 176 39.2
Mapoly0001s0415 Marchantia polymorpha HOM05D003860 ORTHO05D004218 1.6e-28 133.3 186 38.2
Ciclev10005898m.g Citrus clementina HOM05D003860 ORTHO05D004218 2.1e-28 132.9 180 41.1
PSO782G0200 Papaver somniferum HOM05D010112 ORTHO05D000397 3.9e-27 128.6 99 77.8
PSO063G5604 Papaver somniferum HOM05D010112 ORTHO05D000397 5.1e-27 128.3 99 76.8
AUR62002255 Chenopodium quinoa HOM05D003860 ORTHO05D004218 6.6e-27 127.9 273 33.0
SGA_v2.0_scaffold101G29803 Striga asiatica HOM05D003860 ORTHO05D004218 1.1e-26 127.1 201 39.3
Manes.03G168100 Manihot esculenta HOM05D003860 ORTHO05D004218 5.6e-26 124.8 141 44.7
PSO151G0138 Papaver somniferum HOM05D010112 ORTHO05D000397 7.3e-26 124.4 99 69.7
SEGI_04428 Sequoiadendron giganteum HOM05D003860 ORTHO05D004218 1.1e-24 120.6 138 39.1
ClCG06G006760 Citrullus lanatus HOM05D003860 ORTHO05D004218 6.8e-24 117.9 163 40.5
PSO386G0085 Papaver somniferum HOM05D003860 ORTHO05D004218 1.2e-23 117.1 137 50.4
PSO151G0135 Papaver somniferum HOM05D010112 ORTHO05D000397 1.5e-23 116.7 110 60.9
Pp3c1_19590 Physcomitrium patens HOM05D003860 ORTHO05D004218 2.0e-23 116.3 191 33.5
ATR0665G258 Amborella trichopoda HOM05D003860 ORTHO05D004218 5.8e-23 114.8 109 47.7
Lsat_1_v5_gn_7_62061 Lactuca sativa HOM05D003860 ORTHO05D004218 5.8e-23 114.8 115 46.1
PSO832G4457 Papaver somniferum HOM05D000279 ORTHO05D000397 7.6e-23 114.4 97 66.0
PSO339G5618 Papaver somniferum HOM05D010112 ORTHO05D000397 2.9e-22 112.5 110 59.1
A03p15860 Brassica napus HOM05D003860 ORTHO05D004218 1.1e-21 110.5 146 38.4
Mapoly0013s0014 Marchantia polymorpha HOM05D003860 ORTHO05D004218 1.4e-21 110.2 189 33.9
C03p18580 Brassica napus HOM05D003860 ORTHO05D004218 1.9e-21 109.8 146 38.4
BolC3t14252H Brassica oleracea HOM05D003860 ORTHO05D004218 1.9e-21 109.8 146 38.4
BcaC03g14550 Brassica carinata HOM05D003860 ORTHO05D004218 7.1e-21 107.8 174 33.9
PSO151G0021 Papaver somniferum HOM05D010112 ORTHO05D000397 2.7e-20 105.9 109 57.8
Sp6g14330 Schrenkiella parvula HOM05D003860 ORTHO05D004218 6.0e-20 104.8 131 36.6
PGSC0003DMG400005308 Solanum tuberosum HOM05D003860 ORTHO05D004218 1.7e-19 103.2 116 39.7
Zm00001eb417650 Zea mays HOM05D003860 ORTHO05D004218 1.7e-19 103.2 99 44.4
PSO151G0086 Papaver somniferum HOM05D010112 ORTHO05D000397 2.3e-19 102.8 105 58.1
PSO724G0039 Papaver somniferum HOM05D003860 ORTHO05D004218 3.9e-19 102.1 148 45.9
Peaxi162Scf01247g00111 Petunia axillaris HOM05D003860 ORTHO05D004218 3.9e-19 102.1 100 42.0
PSO339G1629 Papaver somniferum HOM05D010112 ORTHO05D000397 8.7e-19 100.9 110 55.5
AagrBONN_evm.TU.Sc2ySwM_368.1422 Anthoceros agrestis HOM05D003860 ORTHO05D004218 2.5e-18 99.4 179 31.8
PSO339G3521 Papaver somniferum HOM05D010112 ORTHO05D000397 2.5e-18 99.4 109 56.0
Lsat_1_v5_gn_2_69300 Lactuca sativa HOM05D003860 ORTHO05D004218 3.3e-18 99.0 145 37.2
SalBow5G0294 Salvia bowleyana HOM05D003860 ORTHO05D004218 5.6e-18 98.2 100 46.0
AT5G52070 Arabidopsis thaliana HOM05D003860 ORTHO05D004218 7.3e-18 97.8 151 35.1
SHI00610 Sapria himalayana HOM05D003860 ORTHO05D004218 7.3e-18 97.8 104 44.2
PSO339G0692 Papaver somniferum HOM05D010112 ORTHO05D000397 8.1e-17 94.4 110 54.5
BcaC01g06162 Brassica carinata HOM05D003860 ORTHO05D004218 1.1e-16 94.0 131 33.6
PSO151G0191 Papaver somniferum HOM05D010112 ORTHO05D000397 1.8e-16 93.2 110 53.6
PSO339G0566 Papaver somniferum HOM05D010112 ORTHO05D000397 3.4e-15 89.0 103 53.4
CBR_g50140 Chara braunii HOM05D003860 ORTHO05D004218 9.9e-15 87.4 138 34.8
CARHR181580 Cardamine hirsuta HOM05D003860 ORTHO05D004218 1.3e-14 87.0 172 33.7
SMO358G0545 Selaginella moellendorffii HOM05D003860 ORTHO05D004218 6.0e-12 78.2 131 31.3
HPP92_016073 Vanilla planifolia HOM05D003860 ORTHO05D004218 2.5e-10 72.8 78 42.3
Cpa.g.sc126.47 Carica papaya HOM05D003860 ORTHO05D004218 1.8e-08 66.6 48 54.2
PSO478G3863 Papaver somniferum HOM05D010112 ORTHO05D000397 2.0e-07 63.2 52 67.3
VMungo0251G0597 Vigna mungo HOM05D003860 ORTHO05D004218 2.6e-07 62.8 91 36.3
PSO017G2160 Papaver somniferum HOM05D010112 ORTHO05D000397 1.3e-06 60.5 93 47.3
Aqoxy2G04045 Aquilegia oxysepala HOM05D003860 ORTHO05D004218 4.9e-06 58.5 113 36.3
PSO026G0003 Papaver somniferum HOM05D020174 ORTHO05D004218 6.4e-06 58.2 37 67.6
PSO541G0200 Papaver somniferum HOM05D020174 ORTHO05D004218 6.4e-06 58.2 37 67.6
PSO541G5719 Papaver somniferum HOM05D020174 ORTHO05D004218 6.4e-06 58.2 37 67.6


User provided reference genes

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