Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 4.8e-74 281.2 153 100.0
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 2.0e-72 275.8 153 98.0
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 1.2e-40 170.2 151 66.9
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 6.6e-39 164.5 151 66.2
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 7.3e-38 161.0 144 68.1
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.2e-37 160.2 158 62.7
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 1.2e-37 160.2 151 64.9
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 1.6e-37 159.8 144 67.4
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.6e-37 159.8 144 67.4
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 2.1e-37 159.5 158 62.7
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.8e-37 159.1 144 67.4
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 3.6e-37 158.7 159 62.9
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 3.6e-37 158.7 160 60.6
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 4.7e-37 158.3 136 66.9
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 6.1e-37 157.9 150 64.0
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 1.8e-36 156.4 160 61.2
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.8e-36 156.4 158 62.0
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.8e-36 156.4 138 64.5
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 2.3e-36 156.0 147 66.0
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 3.0e-36 155.6 139 65.5
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 4.0e-36 155.2 134 66.4
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 6.8e-36 154.5 160 60.6
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 6.8e-36 154.5 156 62.8
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.2e-35 153.7 139 64.7
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 2.0e-35 152.9 139 62.6
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 4.4e-35 151.8 136 66.2
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 5.7e-35 151.4 140 66.4
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 7.5e-35 151.0 155 63.2
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 7.5e-35 151.0 143 61.5
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 1.3e-34 150.2 153 60.1
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 1.3e-34 150.2 153 58.8
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 4.9e-34 148.3 150 60.7
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 4.9e-34 148.3 144 63.2
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 8.3e-34 147.5 152 59.9
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 1.4e-33 146.7 118 67.8
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 1.4e-33 146.7 152 59.9
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 4.1e-33 145.2 140 60.7
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 5.4e-33 144.8 135 60.7
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 5.4e-33 144.8 146 56.2
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 1.2e-32 143.7 147 56.5
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 1.2e-32 143.7 147 56.5
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 2.0e-32 142.9 153 58.2
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 2.7e-32 142.5 146 55.5
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 2.7e-32 142.5 118 67.8
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 1.0e-31 140.6 134 61.2
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 1.7e-31 139.8 143 58.7
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 1.7e-31 139.8 149 59.1
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 3.0e-31 139.0 144 60.4
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 3.0e-31 139.0 144 60.4
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 3.0e-31 139.0 151 59.6
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 3.9e-31 138.7 143 59.4
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 3.9e-31 138.7 153 56.9
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 3.9e-31 138.7 153 56.9
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 8.6e-31 137.5 140 60.0
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 1.1e-30 137.1 160 55.6
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 1.1e-30 137.1 148 57.4
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 1.1e-30 137.1 149 58.4
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 1.5e-30 136.7 143 59.4
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 1.5e-30 136.7 137 61.3
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 1.9e-30 136.3 160 55.6
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 3.3e-30 135.6 145 57.9
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 3.3e-30 135.6 156 57.7
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 3.3e-30 135.6 154 56.5
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 4.3e-30 135.2 108 67.6
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 5.6e-30 134.8 145 59.3
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 5.6e-30 134.8 138 60.1
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 5.6e-30 134.8 139 59.7
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 7.3e-30 134.4 160 56.2
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 7.3e-30 134.4 160 56.2
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 7.3e-30 134.4 146 58.2
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 7.3e-30 134.4 154 55.8
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 7.3e-30 134.4 136 59.6
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 9.5e-30 134.0 140 59.3
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 1.6e-29 133.3 133 59.4
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 2.1e-29 132.9 198 49.5
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 2.8e-29 132.5 160 54.4
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 4.7e-29 131.7 135 57.8
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 8.0e-29 131.0 158 56.3
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 8.0e-29 131.0 158 56.3
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 8.0e-29 131.0 158 56.3
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 8.0e-29 131.0 148 57.4
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 8.0e-29 131.0 139 54.7
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 8.0e-29 131.0 138 59.4
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 8.0e-29 131.0 137 58.4
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 1.0e-28 130.6 134 59.0
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 1.4e-28 130.2 118 65.3
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 1.8e-28 129.8 157 59.2
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 2.3e-28 129.4 141 57.4
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 2.3e-28 129.4 144 56.9
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 3.1e-28 129.0 160 52.5
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 3.1e-28 129.0 137 59.1
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 1.2e-27 127.1 136 60.3
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 2.6e-27 125.9 159 56.6
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 5.8e-27 124.8 141 55.3
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 9.8e-27 124.0 134 59.7
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 2.2e-26 122.9 152 55.3
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 6.4e-26 121.3 150 54.7
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.1e-25 120.6 126 61.1
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 3.2e-25 119.0 152 52.0
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 4.1e-25 118.6 144 53.5
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 5.4e-25 118.2 84 75.0
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 1.2e-24 117.1 79 75.9
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 2.7e-24 115.9 162 53.1
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 3.5e-24 115.5 140 56.4
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 4.6e-24 115.2 122 59.0
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 7.8e-24 114.4 141 52.5
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 5.0e-23 111.7 91 69.2
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 5.0e-23 111.7 91 69.2
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 3.3e-22 109.0 171 46.2
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 1.2e-21 107.1 139 52.5
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 3.6e-21 105.5 88 68.2
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 3.6e-21 105.5 173 43.4
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 4.7e-21 105.1 103 58.3
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 4.7e-21 105.1 106 57.5
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 1.4e-20 103.6 137 51.1
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 1.2e-19 100.5 112 58.0
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 2.6e-19 99.4 72 70.8
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 2.6e-19 99.4 153 50.3
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 4.4e-19 98.6 72 72.2
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 7.8e-16 87.8 115 50.4
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.3e-15 87.0 137 48.9
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 6.6e-15 84.7 83 61.4
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 2.5e-14 82.8 129 43.4
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 1.1e-12 77.4 102 45.1
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 3.1e-12 75.9 57 71.9
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 1.3e-10 70.5 105 49.5
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 2.2e-10 69.7 134 42.5


User provided reference genes

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