Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 9.8e-92 340.1 172 100.0
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 7.5e-76 287.3 172 87.2
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.0e-40 170.6 162 59.3
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 3.0e-40 169.1 116 73.3
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 8.7e-40 167.5 100 82.0
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.1e-39 167.2 165 56.4
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 2.5e-39 166.0 100 79.0
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 3.3e-39 165.6 99 76.8
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 4.3e-39 165.2 93 83.9
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 9.6e-39 164.1 93 83.9
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 1.6e-38 163.3 160 56.9
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 1.6e-38 163.3 106 74.5
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 2.1e-38 162.9 93 81.7
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 2.1e-38 162.9 93 79.6
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 2.8e-38 162.5 100 83.0
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 3.7e-38 162.2 102 74.5
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 4.8e-38 161.8 129 64.3
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 6.2e-38 161.4 161 56.5
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 6.2e-38 161.4 144 61.8
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 1.4e-37 160.2 100 77.0
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.4e-37 160.2 100 77.0
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.4e-37 160.2 100 77.0
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 1.4e-37 160.2 92 83.7
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.4e-37 160.2 149 57.7
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 1.8e-37 159.8 93 82.8
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 1.8e-37 159.8 151 58.3
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 2.4e-37 159.5 99 76.8
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 3.1e-37 159.1 138 65.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.0e-37 158.7 100 76.0
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.0e-37 158.7 100 76.0
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 4.0e-37 158.7 151 57.0
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 6.9e-37 157.9 151 57.6
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 6.9e-37 157.9 102 77.5
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 6.9e-37 157.9 99 76.8
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 1.5e-36 156.8 128 62.5
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 1.5e-36 156.8 155 54.2
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.0e-36 156.4 102 75.5
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 2.0e-36 156.4 151 57.0
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 2.6e-36 156.0 161 55.9
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 2.6e-36 156.0 117 65.8
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 2.6e-36 156.0 93 77.4
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 3.4e-36 155.6 156 55.8
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 3.4e-36 155.6 147 60.5
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 4.5e-36 155.2 93 75.3
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 5.8e-36 154.8 147 60.5
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 5.8e-36 154.8 140 60.7
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 7.6e-36 154.5 149 59.7
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 1.0e-35 154.1 93 76.3
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.0e-35 154.1 158 57.0
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 1.0e-35 154.1 93 76.3
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 76.3
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.3e-35 153.7 104 75.0
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.3e-35 153.7 104 75.0
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.2e-35 152.9 149 59.7
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 2.2e-35 152.9 147 55.8
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 3.8e-35 152.1 93 75.3
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 3.8e-35 152.1 93 75.3
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 3.8e-35 152.1 93 75.3
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 3.8e-35 152.1 93 75.3
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 3.8e-35 152.1 93 75.3
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 4.9e-35 151.8 93 74.2
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 4.9e-35 151.8 93 74.2
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 4.9e-35 151.8 93 76.3
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 4.9e-35 151.8 93 76.3
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 4.9e-35 151.8 93 76.3
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 4.9e-35 151.8 142 57.7
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 6.5e-35 151.4 93 75.3
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 6.5e-35 151.4 93 75.3
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.1e-34 150.6 93 75.3
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 1.4e-34 150.2 93 74.2
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.4e-34 150.2 117 67.5
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.9e-34 149.8 173 49.7
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 2.5e-34 149.4 93 75.3
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 3.2e-34 149.1 174 55.2
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 4.2e-34 148.7 140 55.0
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 5.5e-34 148.3 93 73.1
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 5.5e-34 148.3 168 52.4
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 2.1e-33 146.4 102 64.7
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 7.9e-33 144.4 141 53.2
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 3.9e-32 142.1 153 50.3
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 8.7e-32 141.0 177 50.8
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 2.5e-31 139.4 93 67.7
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 2.2e-30 136.3 71 90.1
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 2.8e-30 136.0 112 58.9
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 6.3e-30 134.8 99 63.6
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 8.2e-30 134.4 127 55.1
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 1.2e-28 130.6 140 50.7
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 2.0e-28 129.8 93 64.5
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 5.9e-28 128.3 72 77.8
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 1.4e-26 123.6 78 71.8
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 1.4e-26 123.6 64 92.2
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 6.1e-25 118.2 98 61.2
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.8e-22 109.4 62 82.3
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 4.8e-22 108.6 63 79.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 1.4e-21 107.1 109 51.4
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 2.4e-21 106.3 129 46.5
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 5.3e-21 105.1 63 76.2
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 2.0e-20 103.2 60 78.3
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.2e-17 94.0 70 61.4


User provided reference genes

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