Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5603 Papaver somniferum HOM05D003994 ORTHO05D004957 3.7e-126 454.9 232 100.0
PSO017G2109 Papaver somniferum HOM05D003994 ORTHO05D004957 4.8e-126 454.5 232 99.6
Aqoxy4G01712 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 7.7e-100 367.5 225 80.9
Aqoxy1G00146 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 1.3e-99 366.7 225 80.4
TAR629G0599 Trochodendron aralioides HOM05D003994 ORTHO05D004957 6.1e-97 357.8 223 79.4
TAR376G0382 Trochodendron aralioides HOM05D003994 ORTHO05D004957 1.0e-96 357.1 223 78.5
Nn3g20343 Nelumbo nucifera HOM05D003994 ORTHO05D004957 6.8e-96 354.4 220 80.0
Haze_02136 Corylus avellana HOM05D003994 ORTHO05D004957 9.8e-95 350.5 224 74.6
GSVIVG01024019001 Vitis vinifera HOM05D003994 ORTHO05D004957 1.3e-94 350.1 219 79.0
CANSAT56G2628 Cannabis sativa HOM05D003994 ORTHO05D004957 2.2e-94 349.4 224 75.0
Cfa005247 Carpinus fangiana HOM05D003994 ORTHO05D004957 3.7e-94 348.6 224 73.2
CiPaw.05G082400 Carya illinoinensis HOM05D003994 ORTHO05D004957 8.3e-94 347.4 215 77.2
CsaV3_2G016120 Cucumis sativus L. HOM05D003994 ORTHO05D004957 3.1e-93 345.5 220 75.5
Prupe.7G263800 Prunus persica HOM05D003994 ORTHO05D004957 3.1e-93 345.5 220 76.4
MD05G1122300 Malus domestica HOM05D003994 ORTHO05D004957 5.4e-93 344.7 220 75.9
CiPaw.06G111900 Carya illinoinensis HOM05D003994 ORTHO05D004957 2.0e-92 342.8 221 76.9
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 2.7e-92 342.4 223 75.3
Sed0013006 Sechium edule HOM05D003994 ORTHO05D004957 4.5e-92 341.7 220 75.0
RcHm_v2.0_Chr7g0224781 Rosa chinensis HOM05D003994 ORTHO05D004957 5.9e-92 341.3 214 78.0
Potri.004G175600 Populus trichocarpa HOM05D003994 ORTHO05D004957 7.8e-92 340.9 227 74.4
CANSAT25G2109 Cannabis sativa HOM05D003994 ORTHO05D004957 1.0e-91 340.5 219 73.5
TWI79G1032 Tripterygium wilfordii HOM05D003994 ORTHO05D004957 1.7e-91 339.7 217 74.2
FvH4_2g13710 Fragaria vesca HOM05D003994 ORTHO05D004957 3.8e-91 338.6 219 75.3
Sed0021478 Sechium edule HOM05D003994 ORTHO05D004957 3.8e-91 338.6 220 74.5
DCAR_025322 Daucus carota HOM05D003994 ORTHO05D004957 8.6e-91 337.4 216 76.9
Hma1.2p1_0163F.1_g072490 Hydrangea macrophylla HOM05D003994 ORTHO05D004957 8.6e-91 337.4 221 76.0
Sc08g0002910 Simmondsia chinensis HOM05D003994 ORTHO05D004957 1.5e-90 336.7 227 74.0
FAN20G1157 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.9e-90 336.3 217 76.0
FvH4_2g14000 Fragaria vesca HOM05D003994 ORTHO05D004957 3.3e-90 335.5 217 76.0
Manes.04G058800 Manihot esculenta HOM05D003994 ORTHO05D004957 3.3e-90 335.5 225 72.4
COL.COLO4_17341 Corchorus olitorius HOM05D003994 ORTHO05D004957 4.3e-90 335.1 222 73.4
Eucgr.I01421 Eucalyptus grandis HOM05D003994 ORTHO05D004957 4.3e-90 335.1 214 75.7
FAN27G1606 Fragaria x ananassa HOM05D003994 ORTHO05D004957 5.6e-90 334.7 217 75.6
Atru.chr5.3321 Acer truncatum HOM05D003994 ORTHO05D004957 7.3e-90 334.3 229 69.9
Duzib052G1000 Durio zibethinus HOM05D003994 ORTHO05D004957 7.3e-90 334.3 221 73.8
Potri.009G135500 Populus trichocarpa HOM05D003994 ORTHO05D004957 9.5e-90 334.0 230 73.0
Nitab4.5_0001225g0220 Nicotiana tabacum HOM05D003994 ORTHO05D004957 1.2e-89 333.6 222 73.0
Nitab4.5_0001583g0200 Nicotiana tabacum HOM05D003994 ORTHO05D004957 1.2e-89 333.6 222 73.0
Lalb_Chr19g0139051 Lupinus albus HOM05D003994 ORTHO05D004957 2.1e-89 332.8 225 73.3
Lalb_Chr01g0001921 Lupinus albus HOM05D003994 ORTHO05D004957 4.7e-89 331.6 220 73.6
BraA08t34371Z Brassica rapa HOM05D003994 ORTHO05D004957 8.0e-89 330.9 226 70.8
CSS0048612 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 8.0e-89 330.9 215 75.3
Lalb_Chr03g0025191 Lupinus albus HOM05D003994 ORTHO05D004957 8.0e-89 330.9 218 74.8
PGSC0003DMG401014852 Solanum tuberosum HOM05D003994 ORTHO05D004957 1.0e-88 330.5 222 73.0
Phvul.011G036100 Phaseolus vulgaris HOM05D003994 ORTHO05D004957 1.4e-88 330.1 224 71.4
AL2G26920 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 2.3e-88 329.3 224 70.1
A08p24160 Brassica napus HOM05D003994 ORTHO05D004957 3.0e-88 328.9 223 70.4
CSS0002177 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 3.0e-88 328.9 215 74.9
CAN.G940.12 Capsicum annuum HOM05D003994 ORTHO05D004957 3.0e-88 328.9 222 72.1
PGR042G1915 Punica granatum HOM05D003994 ORTHO05D004957 3.0e-88 328.9 223 70.9
Solyc08g005985.1 Solanum lycopersicum HOM05D003994 ORTHO05D004957 3.0e-88 328.9 222 72.5
Sopen08g001960 Solanum pennellii HOM05D003994 ORTHO05D004957 3.0e-88 328.9 222 72.5
Thecc.02G059800 Theobroma cacao HOM05D003994 ORTHO05D004957 5.2e-88 328.2 221 72.9
AT1G68000 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 6.8e-88 327.8 224 70.1
Ca_19074_v3 Cicer arietinum L. HOM05D003994 ORTHO05D004957 6.8e-88 327.8 224 71.4
Carub.0002s1448 Capsella rubella HOM05D003994 ORTHO05D004957 8.9e-88 327.4 224 69.6
Medtr4g073020 Medicago truncatula HOM05D003994 ORTHO05D004957 1.2e-87 327.0 219 72.1
THA.LOC104824762 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 1.2e-87 327.0 221 72.9
Gorai.002G198300 Gossypium raimondii HOM05D003994 ORTHO05D004957 1.5e-87 326.6 226 70.4
BcaC01g00237 Brassica carinata HOM05D003994 ORTHO05D004957 2.6e-87 325.9 221 70.6
CARHR060640 Cardamine hirsuta HOM05D003994 ORTHO05D004957 3.4e-87 325.5 225 68.9
Duzib248G0985 Durio zibethinus HOM05D003994 ORTHO05D004957 3.4e-87 325.5 215 72.6
Thhalv10019092m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 4.4e-87 325.1 224 69.6
Glyma.11G091200 Glycine max HOM05D003994 ORTHO05D004957 4.4e-87 325.1 219 71.2
Hund16215 Selenicereus undatus HOM05D003994 ORTHO05D004957 4.4e-87 325.1 225 70.7
TPR.G38794 Trifolium pratense HOM05D003994 ORTHO05D004957 4.4e-87 325.1 224 70.5
TPR.G39214 Trifolium pratense HOM05D003994 ORTHO05D004957 4.4e-87 325.1 224 70.1
AT4G38570 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 7.5e-87 324.3 222 69.8
BcaB03g15393 Brassica carinata HOM05D003994 ORTHO05D004957 9.8e-87 323.9 228 67.5
Aa31LG6G16590 Aethionema arabicum HOM05D003994 ORTHO05D004957 1.3e-86 323.6 221 71.5
Ah.01g023020 Amaranthus hybridus HOM05D003994 ORTHO05D004957 1.3e-86 323.6 229 68.1
BcaB05g24329 Brassica carinata HOM05D003994 ORTHO05D004957 1.3e-86 323.6 226 68.6
HanXRQChr10g0295951 Helianthus annuus HOM05D003994 ORTHO05D004957 1.3e-86 323.6 224 71.0
SGA_v2.0_scaffold16G07672 Striga asiatica HOM05D003994 ORTHO05D004957 1.3e-86 323.6 222 70.7
BolC2t08504H Brassica oleracea HOM05D003994 ORTHO05D004957 1.7e-86 323.2 227 67.4
Cc09_g07710 Coffea canephora HOM05D003994 ORTHO05D004957 1.7e-86 323.2 224 71.4
Gohir.A01G168900 Gossypium hirsutum HOM05D003994 ORTHO05D004957 1.7e-86 323.2 226 69.9
ECA234G2975 Erigeron canadensis HOM05D003994 ORTHO05D004957 2.2e-86 322.8 221 70.1
QL11p050712 Quercus lobata HOM05D003994 ORTHO05D004957 2.2e-86 322.8 224 71.0
MSTRG.27636 Avicennia marina HOM05D003994 ORTHO05D004957 2.9e-86 322.4 222 70.7
Gohir.D01G159750 Gossypium hirsutum HOM05D003994 ORTHO05D004957 2.9e-86 322.4 226 69.9
BcaB03g15140 Brassica carinata HOM05D003994 ORTHO05D004957 3.7e-86 322.0 225 68.0
BcaC03g14900 Brassica carinata HOM05D003994 ORTHO05D004957 4.9e-86 321.6 227 67.4
A07p32200 Brassica napus HOM05D003994 ORTHO05D004957 4.9e-86 321.6 223 68.2
Thhalv10026160m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 4.9e-86 321.6 225 69.8
C06p37970 Brassica napus HOM05D003994 ORTHO05D004957 8.3e-86 320.9 223 68.6
Rhsim05G0056700 Rhododendron simsii HOM05D003994 ORTHO05D004957 1.1e-85 320.5 223 70.9
Rhsim12G0069500 Rhododendron simsii HOM05D003994 ORTHO05D004957 1.1e-85 320.5 221 71.5
Sp7g37200 Schrenkiella parvula HOM05D003994 ORTHO05D004957 1.1e-85 320.5 221 70.1
HanXRQChr16g0514761 Helianthus annuus HOM05D003994 ORTHO05D004957 1.4e-85 320.1 221 71.0
Sp5g23020 Schrenkiella parvula HOM05D003994 ORTHO05D004957 1.4e-85 320.1 224 67.4
BcaC08g46004 Brassica carinata HOM05D003994 ORTHO05D004957 1.8e-85 319.7 223 68.6
SGA_v2.0_scaffold3G01602 Striga asiatica HOM05D003994 ORTHO05D004957 2.4e-85 319.3 221 70.1
BolC6t38896H Brassica oleracea HOM05D003994 ORTHO05D004957 4.1e-85 318.5 223 68.2
Lsat_1_v5_gn_8_167161 Lactuca sativa HOM05D003994 ORTHO05D004957 5.4e-85 318.2 221 70.6
Actinidia00624 Actinidia chinensis HOM05D003994 ORTHO05D004957 1.2e-84 317.0 237 67.1
MD10G1124800 Malus domestica HOM05D003994 ORTHO05D004957 5.9e-84 314.7 210 72.4
MELO3C020821.2 Cucumis melo HOM05D003994 ORTHO05D004957 1.7e-83 313.2 229 68.1
Migut.N01321 Erythranthe guttata HOM05D003994 ORTHO05D004957 3.0e-83 312.4 222 68.0
VMungo1127G1708 Vigna mungo HOM05D003994 ORTHO05D004957 3.3e-82 308.9 204 71.6
ATR0307G066 Amborella trichopoda HOM05D003994 ORTHO05D004957 7.3e-82 307.8 224 71.4
AUR62037910 Chenopodium quinoa HOM05D003994 ORTHO05D004957 7.3e-82 307.8 212 69.3
FAN24G3352 Fragaria x ananassa HOM05D003994 ORTHO05D004957 4.7e-81 305.1 219 69.9
Sabra04G0117500 Salix brachista HOM05D003994 ORTHO05D004957 4.7e-81 305.1 229 67.7
ClCG02G011950 Citrullus lanatus HOM05D003994 ORTHO05D004957 8.0e-81 304.3 224 68.3
FAN15G2236 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.3e-80 302.8 217 70.5
Os02g0123600 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D004957 2.3e-80 302.8 215 69.3
CDE05G3005 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 3.1e-80 302.4 220 73.6
Lj3g0010701 Lotus japonicus HOM05D003994 ORTHO05D004957 3.1e-80 302.4 202 72.3
C02p23750 Brassica napus HOM05D003994 ORTHO05D004957 5.2e-80 301.6 205 69.3
Carub.0007s0044 Capsella rubella HOM05D003994 ORTHO05D004957 5.2e-80 301.6 227 66.5
AUR62040162 Chenopodium quinoa HOM05D003994 ORTHO05D004957 6.8e-80 301.2 223 65.9
vmacro17345 Vaccinium macrocarpon HOM05D003994 ORTHO05D004957 8.9e-80 300.8 204 72.1
EL10Ac9g21377 Beta vulgaris HOM05D003994 ORTHO05D004957 1.3e-78 297.0 205 68.8
A02p14650 Brassica napus HOM05D003994 ORTHO05D004957 1.7e-78 296.6 205 68.8
BraA02t06532Z Brassica rapa HOM05D003994 ORTHO05D004957 1.7e-78 296.6 205 68.8
PGR142G1861 Punica granatum HOM05D003994 ORTHO05D004957 2.9e-78 295.8 222 67.6
CARHR294300 Cardamine hirsuta HOM05D003994 ORTHO05D004957 3.7e-78 295.4 203 69.0
C03p77150 Brassica napus HOM05D003994 ORTHO05D004957 4.9e-78 295.0 202 69.8
SalBow3G1772 Salvia bowleyana HOM05D003994 ORTHO05D004957 6.4e-78 294.7 203 70.9
Oeu061402.1 Olea europaea HOM05D003994 ORTHO05D004957 8.3e-78 294.3 206 68.9
FAN24G0721 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.1e-77 293.9 255 62.0
Psat7g138440 Pisum sativum HOM05D003994 ORTHO05D004957 1.9e-77 293.1 208 67.8
Glyma.12G033500 Glycine max HOM05D003994 ORTHO05D004957 4.1e-77 292.0 202 69.3
A07p34510 Brassica napus HOM05D003994 ORTHO05D004957 5.4e-77 291.6 205 68.3
MBI02_g21865_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 5.4e-77 291.6 223 69.1
Oeu005708.1 Olea europaea HOM05D003994 ORTHO05D004957 5.4e-77 291.6 208 68.3
Sabra09G0105200 Salix brachista HOM05D003994 ORTHO05D004957 9.2e-77 290.8 249 61.8
Zm00001eb274200 Zea mays HOM05D003994 ORTHO05D004957 2.7e-76 289.3 213 67.1
HPP92_004513 Vanilla planifolia HOM05D003994 ORTHO05D004957 6.6e-75 284.6 198 69.2
unitig_749.g13986 Utricularia gibba HOM05D003994 ORTHO05D004957 1.4e-72 276.9 203 64.5
Dinv43046 Davidia involucrata HOM05D003225 ORTHO05D003818 2.9e-70 269.2 194 69.1
Lsat_1_v5_gn_5_108021 Lactuca sativa HOM05D003994 ORTHO05D004957 1.1e-69 267.3 187 70.1
arahy.Tifrunner.gnm1.ann1.U045QQ Arachis hypogaea HOM05D003994 ORTHO05D004957 5.4e-69 265.0 176 73.9
EL10Ac7g18178 Beta vulgaris HOM05D003994 ORTHO05D004957 6.0e-68 261.5 222 61.3
CDE05G1389 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 5.1e-67 258.5 223 65.5
arahy.Tifrunner.gnm1.ann1.VZUK08 Arachis hypogaea HOM05D003994 ORTHO05D004957 2.1e-65 253.1 216 63.4
SHI32381 Sapria himalayana HOM05D003994 ORTHO05D004957 4.0e-64 248.8 225 57.8
Lj5C178T13 Lonicera japonica HOM05D003994 ORTHO05D004957 3.4e-63 245.7 162 74.7
arahy.Tifrunner.gnm1.ann1.L07Y4L Arachis hypogaea HOM05D003994 ORTHO05D004957 2.2e-62 243.0 203 63.1
SalBow3G2361 Salvia bowleyana HOM05D003994 ORTHO05D004957 4.9e-62 241.9 231 57.1
Peaxi162Scf00045g00144 Petunia axillaris HOM05D003994 ORTHO05D004957 1.1e-61 240.7 222 57.2
Mapoly0071s0023 Marchantia polymorpha HOM05D003994 ORTHO05D004957 1.9e-61 240.0 214 58.4
SGA_v2.0_scaffold243G44305 Striga asiatica HOM05D003994 ORTHO05D004957 2.4e-61 239.6 196 63.8
Pp3c4_10100 Physcomitrium patens HOM05D003994 ORTHO05D004957 5.4e-61 238.4 218 60.1
Zm00001eb389940 Zea mays HOM05D003994 ORTHO05D004957 2.1e-60 236.5 213 59.6
C03p25490 Brassica napus HOM05D003994 ORTHO05D004957 1.0e-59 234.2 160 71.2
Cpa.g.sc37.130 Carica papaya HOM05D003994 ORTHO05D004957 1.3e-59 233.8 150 76.7
Pp3c3_18340 Physcomitrium patens HOM05D003994 ORTHO05D004957 2.3e-59 233.0 218 58.7
SMO112G0024 Selaginella moellendorffii HOM05D003994 ORTHO05D004957 2.5e-58 229.6 215 55.8
BolC3t19967H Brassica oleracea HOM05D003994 ORTHO05D004957 3.6e-57 225.7 204 57.4
CBR_g32608 Chara braunii HOM05D003994 ORTHO05D004957 7.6e-55 218.0 216 54.2
SalBow5G5214 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.9e-53 213.4 186 61.8
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 6.0e-52 208.4 152 68.4
FAN15G2231 Fragaria x ananassa HOM05D003994 ORTHO05D004957 3.9e-51 205.7 157 67.5
MBI11_g13142_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 1.5e-42 177.2 234 47.9
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 2.6e-39 166.4 188 51.6
Cre10.g419800 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D004957 4.5e-39 165.6 236 41.5
MCO09G063 Micromonas commoda HOM05D003994 ORTHO05D004957 5.8e-39 165.2 237 40.5
BcaC08g46226 Brassica carinata HOM05D003994 ORTHO05D004957 2.7e-36 156.4 117 66.7
arahy.Tifrunner.gnm1.ann1.NCR277 Arachis hypogaea HOM05D003994 ORTHO05D004957 8.7e-35 151.4 112 67.0
PRCOL_00004558 Prasinoderma coloniale HOM05D003994 ORTHO05D004957 1.3e-33 147.5 218 39.9
AL7G10460 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 3.1e-32 142.9 106 64.2
arahy.Tifrunner.gnm1.ann1.8L0F4Y Arachis hypogaea HOM05D003994 ORTHO05D004957 2.0e-31 140.2 99 68.7
FAN27G1783 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.2e-28 131.0 122 59.0
BcaNung05108 Brassica carinata HOM05D003994 ORTHO05D004957 1.0e-27 127.9 119 58.0
Cfa022653 Carpinus fangiana HOM05D003994 ORTHO05D004957 2.3e-27 126.7 175 40.6
RcHm_v2.0_Chr5g0023251 Rosa chinensis HOM05D003994 ORTHO05D004957 4.8e-25 119.0 78 73.1
MD08G1201300 Malus domestica HOM05D003994 ORTHO05D036609 2.5e-18 96.7 72 55.6
Pp3c10_9870 Physcomitrium patens HOM05D003994 ORTHO05D310819 2.8e-17 93.2 204 32.4
MD16G1270800 Malus domestica HOM05D003994 ORTHO05D036609 3.7e-17 92.8 76 56.6
MBI11_g33763_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 4.8e-17 92.4 71 66.2
THA.LOC104807810 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 5.1e-11 72.4 104 42.3
Os06g0492000 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D036609 2.4e-08 63.5 40 67.5
arahy.Tifrunner.gnm1.ann1.B18QXV Arachis hypogaea HOM05D003994 ORTHO05D086742 4.5e-07 59.3 66 48.5
CBR_g3510 Chara braunii HOM05D003994 ORTHO05D043992 6.5e-06 55.5 70 37.1


User provided reference genes

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