Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 6.3e-257 890.2 424 100.0
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 6.9e-256 886.7 424 99.3
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 8.9e-211 736.9 424 78.5
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.3e-209 733.0 424 78.8
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.6e-207 726.1 424 77.4
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 5.0e-206 721.1 424 76.2
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 1.1e-205 719.9 424 76.4
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 7.3e-205 717.2 424 76.4
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 9.5e-205 716.8 424 76.2
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 2.1e-204 715.7 424 78.3
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 1.1e-203 713.4 425 74.8
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.3e-203 712.2 425 76.7
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 1.2e-202 709.9 425 76.0
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 1.5e-202 709.5 425 75.8
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 3.4e-202 708.4 424 75.5
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 4.4e-202 708.0 424 75.9
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 1.7e-201 706.1 424 75.2
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 3.7e-201 704.9 422 76.1
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.9e-200 702.6 424 75.5
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 5.4e-200 701.0 424 75.2
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 7.0e-200 700.7 413 76.3
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 7.0e-200 700.7 421 74.6
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 7.0e-200 700.7 411 76.2
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 1.2e-199 699.9 410 76.3
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 1.2e-199 699.9 423 74.5
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 2.0e-199 699.1 419 75.2
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 6.6e-198 694.1 426 72.3
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 7.3e-197 690.6 427 73.3
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 2.1e-196 689.1 412 76.9
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.1e-195 686.8 424 72.6
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.4e-195 686.4 424 71.9
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 6.8e-195 684.1 425 72.7
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 8.9e-195 683.7 424 72.9
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 1.5e-194 682.9 415 74.9
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 2.6e-194 682.2 424 72.6
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 5.8e-194 681.0 413 74.6
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 5.8e-194 681.0 425 70.8
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 9.9e-194 680.2 424 72.6
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.3e-193 679.9 417 74.6
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.7e-193 679.5 424 71.7
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 2.2e-193 679.1 412 74.5
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 2.2e-193 679.1 424 71.9
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 4.9e-193 677.9 424 72.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 8.3e-193 677.2 424 72.2
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 5.4e-192 674.5 424 71.5
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 7.1e-192 674.1 424 71.0
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 7.1e-192 674.1 424 71.5
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 7.1e-192 674.1 424 71.5
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 3.5e-191 671.8 424 71.2
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 7.8e-191 670.6 425 71.8
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.0e-190 670.2 428 72.0
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 1.3e-190 669.8 424 71.0
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 3.9e-190 668.3 424 71.2
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 8.6e-190 667.2 424 70.3
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.9e-189 666.0 425 72.2
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 4.3e-189 664.8 422 73.0
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 5.6e-189 664.5 425 71.5
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 7.3e-189 664.1 424 71.0
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 9.5e-189 663.7 419 71.4
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 2.8e-188 662.1 424 71.2
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 4.7e-188 661.4 413 73.8
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 8.1e-188 660.6 412 71.4
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 8.1e-188 660.6 450 68.2
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 1.1e-187 660.2 424 69.1
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.8e-187 659.4 424 70.5
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 5.2e-187 657.9 419 71.4
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 2.6e-186 655.6 425 70.8
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 4.4e-186 654.8 424 71.7
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 2.2e-185 652.5 418 70.1
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.2e-185 652.5 424 71.0
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 3.8e-185 651.7 424 69.6
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 4.1e-184 648.3 425 69.6
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 9.2e-184 647.1 402 72.6
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 1.5e-181 639.8 418 69.6
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 2.5e-181 639.0 425 68.7
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 2.1e-180 636.0 540 58.0
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.4e-179 632.5 386 72.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.1e-179 632.1 417 70.5
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 2.3e-174 615.9 435 65.3
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 6.2e-172 607.8 469 61.8
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 8.1e-172 607.4 422 64.7
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.8e-171 606.3 409 67.2
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.4e-168 596.7 412 67.2
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.4e-168 595.9 458 62.9
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.2e-167 593.6 413 65.4
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 4.0e-155 552.0 393 64.6
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.7e-153 546.6 413 61.7
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 2.2e-153 546.2 425 61.2
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.2e-151 540.4 313 78.0
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 1.5e-149 533.5 371 66.0
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.4e-147 526.9 313 74.8
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.8e-147 526.6 363 66.9
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 4.8e-140 501.9 380 63.7
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 1.8e-134 483.4 424 57.8
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 2.5e-96 356.7 352 44.6
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 5.2e-94 349.0 214 73.4
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 1.1e-91 341.3 205 76.1
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 7.3e-88 328.6 204 70.6
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 2.8e-87 326.6 358 44.1
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 4.7e-87 325.9 349 43.6
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 4.4e-77 292.7 355 38.6
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 2.6e-61 240.4 280 40.0
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 4.0e-46 189.9 106 78.3
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 3.1e-38 163.7 103 70.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.0e-36 158.7 85 82.4
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 2.9e-36 157.1 106 67.9
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 2.9e-36 157.1 106 67.9
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 1.1e-35 155.2 103 68.0
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 1.7e-28 131.3 138 50.7
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.8e-14 84.7 49 73.5
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 9.1e-14 82.4 50 70.0
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.2e-13 82.0 49 71.4
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.2e-11 72.8 47 66.0
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 3.0e-09 67.4 62 53.2
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 5.7e-08 63.2 45 62.2


User provided reference genes

Program Settings