Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5502 Papaver somniferum HOM05D056025 ORTHO05D009211 1.8e-251 872.8 723 100.0
PSO541G2379 Papaver somniferum HOM05D056025 ORTHO05D009211 1.2e-236 823.5 727 84.7
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.6e-31 142.1 479 32.8
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 2.5e-19 101.7 457 28.4
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 1.7e-12 79.0 288 31.6
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 4.2e-11 74.3 452 25.4
unitig_37.g12567 Utricularia gibba HOM05D007892 ORTHO05D009211 7.2e-11 73.6 53 71.7
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 1.2e-10 72.8 469 24.7
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 2.7e-10 71.6 59 67.8
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 2.7e-10 71.6 74 55.4
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 2.7e-10 71.6 158 35.4
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 2.7e-10 71.6 65 58.5
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 3.6e-10 71.2 69 59.4
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 4.7e-10 70.9 86 50.0
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 6.1e-10 70.5 65 60.0
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 8.0e-10 70.1 469 24.1
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 1.4e-09 69.3 128 40.6
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 1.8e-09 68.9 113 43.4
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 1.8e-09 68.9 51 68.6
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 2.3e-09 68.6 470 24.7
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 3.0e-09 68.2 464 23.9
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 3.0e-09 68.2 82 51.2
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 3.9e-09 67.8 470 24.7
EL10Ac4g08232 Beta vulgaris HOM05D007892 ORTHO05D009211 8.8e-09 66.6 56 64.3
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 8.8e-09 66.6 89 48.3
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 8.8e-09 66.6 68 58.8
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 1.1e-08 66.2 74 52.7
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 1.5e-08 65.9 178 32.6
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 2.0e-08 65.5 194 33.0
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 2.0e-08 65.5 331 27.8
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 2.6e-08 65.1 475 24.0
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 4.4e-08 64.3 346 27.2
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 5.7e-08 63.9 280 27.9
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 5.7e-08 63.9 152 35.5
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 5.7e-08 63.9 457 25.6
CDE05G2993 Ceratophyllum demersum HOM05D007892 ORTHO05D009211 7.4e-08 63.5 213 30.5
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 7.4e-08 63.5 38 81.6
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 7.4e-08 63.5 505 25.7
ATR0150G007 Amborella trichopoda HOM05D007892 ORTHO05D009211 1.3e-07 62.8 170 35.3
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 1.3e-07 62.8 167 38.3
Migut.M00782 Erythranthe guttata HOM05D007892 ORTHO05D009211 1.3e-07 62.8 167 34.7
Ah.06g184550 Amaranthus hybridus HOM05D007892 ORTHO05D009211 1.7e-07 62.4 115 40.0
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 1.7e-07 62.4 84 50.0
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 2.2e-07 62.0 280 27.5
C02p17810 Brassica napus HOM05D012500 ORTHO05D009211 3.7e-07 61.2 105 40.0
BolC2t07910H Brassica oleracea HOM05D012500 ORTHO05D009211 3.7e-07 61.2 105 40.0
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 4.8e-07 60.8 477 23.9
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 4.8e-07 60.8 191 30.9
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 6.3e-07 60.5 469 24.3
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 6.3e-07 60.5 264 30.3
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 6.3e-07 60.5 196 29.6
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 8.2e-07 60.1 346 28.3
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 8.2e-07 60.1 256 29.7
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.4e-06 59.3 222 29.7
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 1.8e-06 58.9 87 46.0
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 1.8e-06 58.9 69 52.2
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 1.8e-06 58.9 282 28.7
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 2.4e-06 58.5 468 25.9
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 2.4e-06 58.5 240 31.7
Zm00001eb298400 Zea mays HOM05D061528 ORTHO05D009211 3.1e-06 58.2 77 46.8
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 4.1e-06 57.8 157 32.5
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 5.3e-06 57.4 148 33.8
Carub.0008s1424 Capsella rubella HOM05D012500 ORTHO05D009211 7.0e-06 57.0 96 41.7
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 7.0e-06 57.0 227 30.8
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 7.0e-06 57.0 346 27.2
BcaC03g14367 Brassica carinata HOM05D012500 ORTHO05D009211 9.1e-06 56.6 134 33.6


User provided reference genes

Program Settings