Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 8.0e-147 523.9 286 100.0
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 9.7e-145 516.9 286 98.6
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 3.6e-91 339.0 286 61.2
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 2.4e-90 336.3 291 67.7
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 6.8e-90 334.7 280 60.7
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.5e-89 333.6 285 60.4
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 2.6e-89 332.8 282 61.7
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 1.7e-88 330.1 285 60.4
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 4.9e-88 328.6 282 61.0
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 6.4e-88 328.2 283 59.4
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.9e-87 326.6 287 58.5
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 1.9e-87 326.6 287 58.5
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 1.9e-87 326.6 282 60.3
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 9.3e-87 324.3 286 59.1
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 1.6e-86 323.6 285 60.0
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 2.7e-86 322.8 280 59.3
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 1.7e-85 320.1 284 57.7
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 3.0e-85 319.3 286 66.1
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 3.3e-84 315.8 280 59.3
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 4.3e-84 315.5 286 57.3
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 7.3e-84 314.7 280 58.2
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 7.3e-84 314.7 287 57.1
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 3.6e-83 312.4 283 57.6
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 4.8e-83 312.0 280 63.6
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 8.1e-83 311.2 283 56.9
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 1.4e-82 310.5 280 58.2
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 3.1e-82 309.3 285 57.5
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 3.1e-82 309.3 287 57.8
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 9.0e-82 307.8 284 56.7
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 9.0e-82 307.8 284 58.1
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 7.6e-81 304.7 281 58.7
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 1.3e-80 303.9 284 57.4
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 1.7e-80 303.5 285 55.8
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 1.1e-79 300.8 281 56.6
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 1.9e-79 300.1 283 55.8
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 3.2e-79 299.3 278 58.3
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 4.6e-78 295.4 282 55.7
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 4.6e-78 295.4 282 55.7
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 6.0e-78 295.0 288 53.5
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 1.0e-77 294.3 286 55.6
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 1.0e-77 294.3 292 60.6
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 3.0e-77 292.7 282 63.5
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 1.1e-76 290.8 282 53.9
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 1.1e-76 290.8 284 54.2
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 2.5e-76 289.7 288 54.5
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 2.5e-76 289.7 281 62.6
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 2.5e-76 289.7 283 54.4
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 4.3e-76 288.9 284 53.2
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 5.6e-76 288.5 282 63.1
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 7.4e-76 288.1 283 56.5
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 1.6e-75 287.0 283 55.8
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.8e-75 285.4 281 62.6
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 2.4e-74 283.1 285 57.5
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 3.1e-74 282.7 285 60.4
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 4.0e-74 282.3 285 53.7
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 2.0e-73 280.0 283 54.1
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 5.8e-73 278.5 283 54.4
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 3.2e-71 272.7 279 57.7
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 9.3e-71 271.2 260 55.8
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 9.3e-71 271.2 281 60.9
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.3e-71 271.2 281 60.9
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 7.9e-70 268.1 290 51.0
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 8.7e-69 264.6 307 49.8
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 1.1e-68 264.2 281 60.5
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 1.5e-68 263.8 281 59.8
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 2.1e-67 260.0 298 50.3
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 2.0e-65 253.4 266 53.4
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 3.4e-65 252.7 284 50.4
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 5.8e-65 251.9 291 58.1
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 4.9e-64 248.8 282 49.3
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 1.9e-63 246.9 287 48.1
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 2.7e-62 243.0 239 55.6
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 1.9e-60 236.9 261 54.4
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 4.3e-60 235.7 277 49.5
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.6e-59 233.8 281 56.2
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 4.8e-59 232.3 245 53.9
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 1.2e-57 227.6 236 52.5
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 5.0e-56 222.2 236 51.7
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.1e-55 221.1 238 51.7
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 1.9e-55 220.3 297 44.8
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 5.5e-55 218.8 254 48.0
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 1.2e-54 217.6 244 52.0
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 6.7e-53 211.8 296 49.0
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 1.5e-52 210.7 287 42.2
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.1e-50 204.5 234 49.1
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.1e-50 203.0 281 48.8
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.5e-49 200.7 281 52.7
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 4.8e-43 179.1 235 51.9
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 1.8e-42 177.2 284 45.8
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 6.5e-40 168.7 287 36.2
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 1.9e-39 167.2 209 47.4
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 1.6e-38 164.1 216 45.8
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 1.8e-37 160.6 209 48.3
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 2.3e-37 160.2 201 48.8
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 3.0e-37 159.8 122 60.7
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.1e-36 157.9 125 59.2
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 2.0e-36 157.1 209 48.3
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 3.3e-36 156.4 125 59.2
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 5.7e-36 155.6 209 47.4
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 1.3e-35 154.5 214 47.7
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 6.3e-35 152.1 112 67.9
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 8.2e-35 151.8 169 50.9
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 1.4e-34 151.0 169 50.3
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 1.4e-34 151.0 169 50.3
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 1.8e-34 150.6 169 50.9
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 3.5e-33 146.4 133 57.9
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 8.5e-32 141.7 224 39.7
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 8.5e-32 141.7 92 75.0
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 3.2e-31 139.8 265 36.2
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 1.2e-30 137.9 138 50.0
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 2.0e-28 130.6 67 83.6
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 7.5e-28 128.6 183 43.2
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.0e-24 118.2 208 50.0
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 8.5e-24 115.2 229 45.4
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 1.9e-15 87.4 83 57.8
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 6.1e-14 82.4 85 56.5
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 4.0e-13 79.7 75 57.3
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 3.4e-12 76.6 51 72.5
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 2.8e-11 73.6 223 29.6
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 2.0e-09 67.4 78 46.2
SalBow6G0039 Salvia bowleyana HOM05D006517 ORTHO05D007886 1.2e-06 58.2 27 88.9


User provided reference genes

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