Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5413 Papaver somniferum HOM05D001660 ORTHO05D003277 6.7e-98 360.5 164 100.0
PSO832G0018 Papaver somniferum HOM05D001660 ORTHO05D003277 1.4e-23 113.6 114 52.6
PSO210G1142 Papaver somniferum HOM05D001660 ORTHO05D003277 2.4e-23 112.8 107 55.1
PSO541G0051 Papaver somniferum HOM05D001660 ORTHO05D003277 2.4e-23 112.8 96 59.4
Thhalv10025469m.g Eutrema salsugineum HOM05D001660 ORTHO05D003277 9.2e-23 110.9 96 56.2
COL.COLO4_31583 Corchorus olitorius HOM05D001660 ORTHO05D003277 1.2e-22 110.5 96 57.3
Gohir.A05G165500 Gossypium hirsutum HOM05D001660 ORTHO05D003277 1.6e-22 110.2 96 57.3
Gorai.009G173700 Gossypium raimondii HOM05D001660 ORTHO05D003277 1.6e-22 110.2 96 57.3
Actinidia27000 Actinidia chinensis HOM05D001660 ORTHO05D003277 2.7e-22 109.4 87 59.8
Lalb_Chr09g0327381 Lupinus albus HOM05D001660 ORTHO05D003277 3.5e-22 109.0 98 55.1
PGSC0003DMG400022409 Solanum tuberosum HOM05D001660 ORTHO05D003277 3.5e-22 109.0 109 51.4
Duzib235G1360 Durio zibethinus HOM05D001660 ORTHO05D003277 4.6e-22 108.6 96 56.2
BcaC09g51218 Brassica carinata HOM05D001660 ORTHO05D003277 6.0e-22 108.2 96 54.2
BcaNung02795 Brassica carinata HOM05D001660 ORTHO05D003277 6.0e-22 108.2 96 54.2
BraA01t01222Z Brassica rapa HOM05D001660 ORTHO05D003277 6.0e-22 108.2 96 54.2
CAN.G424.10 Capsicum annuum HOM05D001660 ORTHO05D003277 6.0e-22 108.2 109 52.3
Nn1g03908 Nelumbo nucifera HOM05D001660 ORTHO05D003277 6.0e-22 108.2 89 57.3
RcHm_v2.0_Chr5g0006511 Rosa chinensis HOM05D001660 ORTHO05D003277 7.8e-22 107.8 96 55.2
Sp7g19590 Schrenkiella parvula HOM05D001660 ORTHO05D003277 7.8e-22 107.8 96 54.2
THA.LOC104812699 Tarenaya hassleriana HOM05D001660 ORTHO05D003277 7.8e-22 107.8 96 54.2
DCAR_004137 Daucus carota HOM05D001660 ORTHO05D003277 1.0e-21 107.5 96 56.2
MD10G1046000 Malus domestica HOM05D001660 ORTHO05D003277 1.0e-21 107.5 96 56.2
Nitab4.5_0003574g0040 Nicotiana tabacum HOM05D001660 ORTHO05D003277 1.0e-21 107.5 109 50.5
RcHm_v2.0_Chr5g0006411 Rosa chinensis HOM05D001660 ORTHO05D003277 1.0e-21 107.5 96 55.2
Sopen02g023910 Solanum pennellii HOM05D001660 ORTHO05D003277 1.0e-21 107.5 109 50.5
CARHR228140 Cardamine hirsuta HOM05D001660 ORTHO05D003277 1.3e-21 107.1 89 57.3
Gohir.D05G168500 Gossypium hirsutum HOM05D001660 ORTHO05D003277 1.3e-21 107.1 96 56.2
Aqoxy5G02848 Aquilegia oxysepala HOM05D001660 ORTHO05D003277 1.7e-21 106.7 89 59.6
Migut.M01210 Erythranthe guttata HOM05D001660 ORTHO05D003277 1.7e-21 106.7 116 47.4
Aa31LG6G3480 Aethionema arabicum HOM05D001660 ORTHO05D003277 2.3e-21 106.3 98 52.0
Cc02_g12460 Coffea canephora HOM05D001660 ORTHO05D003277 2.3e-21 106.3 97 53.6
Glyma.07G190300 Glycine max HOM05D001660 ORTHO05D003277 2.3e-21 106.3 115 48.7
Nitab4.5_0003834g0030 Nicotiana tabacum HOM05D001660 ORTHO05D003277 2.3e-21 106.3 109 50.5
Potri.005G183400 Populus trichocarpa HOM05D001660 ORTHO05D003277 2.3e-21 106.3 89 58.4
A01p12790 Brassica napus HOM05D001660 ORTHO05D003277 3.0e-21 105.9 96 53.1
CSS0023132 Camellia sinensis var. sinensis HOM05D001660 ORTHO05D003277 3.0e-21 105.9 89 57.3
Os10g0464400 Oryza sativa ssp. japonica HOM05D001660 ORTHO05D003277 3.0e-21 105.9 89 56.2
FAN11G0361 Fragaria x ananassa HOM05D001660 ORTHO05D003277 3.9e-21 105.5 96 54.2
FAN25G0401 Fragaria x ananassa HOM05D001660 ORTHO05D003277 3.9e-21 105.5 96 54.2
Lalb_Chr05g0218171 Lupinus albus HOM05D001660 ORTHO05D003277 3.9e-21 105.5 98 54.1
Oeu016124.1 Olea europaea HOM05D001660 ORTHO05D003277 3.9e-21 105.5 98 54.1
Solyc02g079100.3 Solanum lycopersicum HOM05D001660 ORTHO05D003277 3.9e-21 105.5 109 48.6
GSVIVG01003195001 Vitis vinifera HOM05D001660 ORTHO05D003277 3.9e-21 105.5 96 54.2
GSVIVG01003197001 Vitis vinifera HOM05D001660 ORTHO05D003277 3.9e-21 105.5 96 54.2
C01p15390 Brassica napus HOM05D001660 ORTHO05D003277 5.1e-21 105.1 96 53.1
BolC1t01493H Brassica oleracea HOM05D001660 ORTHO05D003277 5.1e-21 105.1 96 53.1
MBI10_g16793_MAGBIO Magnolia biondii HOM05D001660 ORTHO05D003277 5.1e-21 105.1 96 53.1
Sc08g0003500 Simmondsia chinensis HOM05D001660 ORTHO05D003277 5.1e-21 105.1 96 54.2
AL7G32600 Arabidopsis lyrata HOM05D001660 ORTHO05D003277 6.6e-21 104.8 96 53.1
AT4G21470 Arabidopsis thaliana HOM05D001660 ORTHO05D003277 6.6e-21 104.8 96 53.1
Migut.I00194 Erythranthe guttata HOM05D001660 ORTHO05D003277 6.6e-21 104.8 89 53.9
Lj1C1213G3 Lonicera japonica HOM05D001660 ORTHO05D003277 6.6e-21 104.8 89 57.3
Prupe.8G053000 Prunus persica HOM05D001660 ORTHO05D003277 6.6e-21 104.8 89 55.1
Mapoly0005s0066 Marchantia polymorpha HOM05D001660 ORTHO05D003277 8.6e-21 104.4 84 58.3
Nitab4.5_0000190g0120 Nicotiana tabacum HOM05D001660 ORTHO05D003277 8.6e-21 104.4 109 50.5
ATR0787G139 Amborella trichopoda HOM05D001660 ORTHO05D003277 1.1e-20 104.0 94 54.3
Manes.16G020800 Manihot esculenta HOM05D001660 ORTHO05D003277 1.1e-20 104.0 78 62.8
Thecc.06G198900 Theobroma cacao HOM05D001660 ORTHO05D003277 1.1e-20 104.0 89 55.1
Aqoxy2G02549 Aquilegia oxysepala HOM05D001660 ORTHO05D003277 1.5e-20 103.6 89 57.3
MSTRG.8638 Avicennia marina HOM05D001660 ORTHO05D003277 1.5e-20 103.6 91 56.0
Carub.0007s1997 Capsella rubella HOM05D001660 ORTHO05D003277 1.5e-20 103.6 98 51.0
Hma1.2p1_0144F.1_g064640 Hydrangea macrophylla HOM05D001660 ORTHO05D003277 1.5e-20 103.6 89 56.2
QL04p018339 Quercus lobata HOM05D001660 ORTHO05D003277 1.5e-20 103.6 104 50.0
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 1.5e-20 103.6 115 46.1
VMungo0251G1038 Vigna mungo HOM05D001660 ORTHO05D003277 1.5e-20 103.6 98 51.0
Zm00001eb278020 Zea mays HOM05D001660 ORTHO05D003277 1.5e-20 103.6 96 52.1
Cpa.g.sc27.119 Carica papaya HOM05D001660 ORTHO05D003277 1.9e-20 103.2 109 49.5
CiPaw.09G158200 Carya illinoinensis HOM05D001660 ORTHO05D003277 1.9e-20 103.2 89 53.9
Medtr4g091060 Medicago truncatula HOM05D001660 ORTHO05D003277 1.9e-20 103.2 96 52.1
Psat7g108520 Pisum sativum HOM05D001660 ORTHO05D003277 1.9e-20 103.2 98 51.0
Atru.chr10.2005 Acer truncatum HOM05D001660 ORTHO05D003277 2.5e-20 102.8 59 76.3
Ca_18484_v3 Cicer arietinum L. HOM05D001660 ORTHO05D003277 2.5e-20 102.8 89 55.1
Ciclev10015592m.g Citrus clementina HOM05D001660 ORTHO05D003277 2.5e-20 102.8 89 56.2
FvH4_3g04040 Fragaria vesca HOM05D001660 ORTHO05D003277 2.5e-20 102.8 96 53.1
PGR042G2885 Punica granatum HOM05D001660 ORTHO05D003277 2.5e-20 102.8 98 51.0
TPR.G36995 Trifolium pratense HOM05D001660 ORTHO05D003277 2.5e-20 102.8 98 51.0
Peaxi162Scf00355g00915 Petunia axillaris HOM05D001660 ORTHO05D003277 3.3e-20 102.4 123 45.5
Sabra02G0060700 Salix brachista HOM05D001660 ORTHO05D003277 3.3e-20 102.4 93 53.8
Glyma.08G058800 Glycine max HOM05D001660 ORTHO05D003277 4.3e-20 102.1 97 51.5
Lj1g0015056 Lotus japonicus HOM05D001660 ORTHO05D003277 4.3e-20 102.1 98 52.0
Pp3c14_9170 Physcomitrium patens HOM05D001660 ORTHO05D003277 4.3e-20 102.1 84 54.8
Potri.002G077200 Populus trichocarpa HOM05D001660 ORTHO05D003277 4.3e-20 102.1 89 53.9
TWI38G0734 Tripterygium wilfordii HOM05D001660 ORTHO05D003277 4.3e-20 102.1 96 55.2
Eucgr.G00853 Eucalyptus grandis HOM05D001660 ORTHO05D003277 5.6e-20 101.7 89 55.1
Phvul.002G222300 Phaseolus vulgaris HOM05D001660 ORTHO05D003277 5.6e-20 101.7 98 50.0
Psat5g291880 Pisum sativum HOM05D001660 ORTHO05D003277 7.3e-20 101.3 98 50.0
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 7.3e-20 101.3 89 53.9
Sabra05G0138900 Salix brachista HOM05D001660 ORTHO05D003277 9.5e-20 100.9 89 55.1
SGA_v2.0_scaffold114G31978 Striga asiatica HOM05D001660 ORTHO05D003277 9.5e-20 100.9 84 56.0
Cfa000356 Carpinus fangiana HOM05D001660 ORTHO05D003277 1.2e-19 100.5 102 48.0
Rhsim13G0170300 Rhododendron simsii HOM05D001660 ORTHO05D003277 1.2e-19 100.5 98 49.0
Nitab4.5_0001967g0010 Nicotiana tabacum HOM05D001660 ORTHO05D003277 1.6e-19 100.1 91 53.8
PGR004G2075 Punica granatum HOM05D001660 ORTHO05D003277 1.6e-19 100.1 98 49.0
unitig_749.g14095 Utricularia gibba HOM05D001660 ORTHO05D003277 1.6e-19 100.1 84 56.0
AagrBONN_evm.TU.Sc2ySwM_117.1987 Anthoceros agrestis HOM05D001660 ORTHO05D003277 2.8e-19 99.4 105 44.8
CANSAT64G2883 Cannabis sativa HOM05D001660 ORTHO05D003277 3.6e-19 99.0 97 53.6
SMO174G0108 Selaginella moellendorffii HOM05D001660 ORTHO05D003277 6.2e-19 98.2 105 45.7
AUR62014720 Chenopodium quinoa HOM05D001660 ORTHO05D003277 1.1e-18 97.4 96 47.9
AUR62019436 Chenopodium quinoa HOM05D001660 ORTHO05D003277 1.1e-18 97.4 96 47.9
ClCG03G005540 Citrullus lanatus HOM05D001660 ORTHO05D003277 1.1e-18 97.4 89 50.6
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 1.1e-18 97.4 78 59.0
Hund21276 Selenicereus undatus HOM05D001660 ORTHO05D003277 1.1e-18 97.4 110 48.2
arahy.Tifrunner.gnm1.ann1.SD5K22 Arachis hypogaea HOM05D001660 ORTHO05D003277 1.4e-18 97.1 89 52.8
Sed0021522 Sechium edule HOM05D001660 ORTHO05D003277 1.4e-18 97.1 78 56.4
Ah.09g236120 Amaranthus hybridus HOM05D001660 ORTHO05D003277 1.8e-18 96.7 94 48.9
EL10Ac8g20526 Beta vulgaris HOM05D001660 ORTHO05D003277 2.4e-18 96.3 78 53.8
CsaV3_1G011810 Cucumis sativus L. HOM05D001660 ORTHO05D003277 2.4e-18 96.3 89 50.6
HanXRQChr04g0124591 Helianthus annuus HOM05D001660 ORTHO05D003277 2.4e-18 96.3 89 53.9
HanXRQChr05g0131491 Helianthus annuus HOM05D001660 ORTHO05D003277 2.4e-18 96.3 89 53.9
arahy.Tifrunner.gnm1.ann1.F92SL8 Arachis hypogaea HOM05D001660 ORTHO05D003277 3.1e-18 95.9 98 49.0
arahy.Tifrunner.gnm1.ann1.YQ76T0 Arachis hypogaea HOM05D001660 ORTHO05D003277 3.1e-18 95.9 98 49.0
Lj4g0007113 Lotus japonicus HOM05D001660 ORTHO05D003277 3.1e-18 95.9 98 49.0
AUR62039196 Chenopodium quinoa HOM05D001660 ORTHO05D003277 5.2e-18 95.1 89 48.3
MELO3C002558.2 Cucumis melo HOM05D001660 ORTHO05D003277 6.8e-18 94.7 58 67.2
Eucgr.G00852 Eucalyptus grandis HOM05D001660 ORTHO05D003277 1.5e-17 93.6 78 57.7
arahy.Tifrunner.gnm1.ann1.8P7H9A Arachis hypogaea HOM05D001660 ORTHO05D003277 3.4e-17 92.4 89 50.6
Lsat_1_v5_gn_7_19661 Lactuca sativa HOM05D001660 ORTHO05D003277 5.8e-17 91.7 78 55.1
AUR62016900 Chenopodium quinoa HOM05D001660 ORTHO05D003277 9.9e-17 90.9 56 69.6
AagrBONN_evm.TU.Sc2ySwM_117.1412 Anthoceros agrestis HOM05D001660 ORTHO05D003277 1.3e-16 90.5 64 62.5
SMO201G0196 Selaginella moellendorffii HOM05D001660 ORTHO05D003277 2.2e-16 89.7 98 45.9
Dinv40484 Davidia involucrata HOM05D001660 ORTHO05D003277 2.9e-16 89.4 76 53.9
TPR.G17001 Trifolium pratense HOM05D001660 ORTHO05D003277 1.9e-15 86.7 94 46.8
RcHm_v2.0_Chr5g0006461 Rosa chinensis HOM05D001660 ORTHO05D003277 3.2e-15 85.9 96 47.9
Haze_06570 Corylus avellana HOM05D001660 ORTHO05D003277 1.2e-14 84.0 52 69.2
Actinidia05574 Actinidia chinensis HOM05D001660 ORTHO05D003277 1.7e-13 80.1 96 43.8
HanXRQChr09g0263881 Helianthus annuus HOM05D001660 ORTHO05D003277 3.9e-13 79.0 58 69.0
MCO04G323 Micromonas commoda HOM05D001660 ORTHO05D003277 7.3e-12 74.7 70 45.7
PRCOL_00005738 Prasinoderma coloniale HOM05D001660 ORTHO05D003277 1.6e-11 73.6 64 50.0
Cre06.g311600 Chlamydomonas reinhardtii HOM05D001660 ORTHO05D003277 6.9e-10 68.2 59 50.8
RcHm_v2.0_Chr5g0006401 Rosa chinensis HOM05D001660 ORTHO05D003277 9.3e-07 57.8 67 41.8
SGA_v2.0_scaffold7G03952 Striga asiatica HOM05D001660 ORTHO05D003277 1.6e-06 57.0 54 48.1


User provided reference genes

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