Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 9.9e-56 219.9 115 100.0
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 2.9e-55 218.4 115 98.3
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 1.4e-41 172.9 110 80.9
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 5.3e-41 171.0 110 79.1
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 6.9e-41 170.6 112 78.6
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 6.9e-41 170.6 109 77.1
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.0e-41 170.2 110 78.2
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.2e-40 169.9 110 77.3
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 1.2e-40 169.9 116 75.9
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.2e-40 169.9 109 77.1
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.5e-40 169.5 116 76.7
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.5e-40 169.5 117 72.6
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 1.5e-40 169.5 117 75.2
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 2.6e-40 168.7 105 81.9
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 2.6e-40 168.7 115 73.9
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 4.5e-40 167.9 112 77.7
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 4.5e-40 167.9 117 76.1
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 9.9e-40 166.8 105 81.0
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 9.9e-40 166.8 105 81.0
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 1.7e-39 166.0 111 75.7
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.7e-39 166.0 110 75.5
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 2.2e-39 165.6 115 73.0
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 4.9e-39 164.5 117 71.8
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 4.9e-39 164.5 117 73.5
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 4.9e-39 164.5 110 76.4
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 4.9e-39 164.5 116 74.1
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 4.9e-39 164.5 105 80.0
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 6.4e-39 164.1 110 74.5
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 6.4e-39 164.1 111 75.7
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 8.4e-39 163.7 117 70.9
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 8.4e-39 163.7 111 74.8
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 1.1e-38 163.3 115 71.3
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 1.4e-38 162.9 116 72.4
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 1.4e-38 162.9 115 71.3
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 1.4e-38 162.9 109 76.1
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 1.9e-38 162.5 121 70.2
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 3.2e-38 161.8 112 74.1
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 3.2e-38 161.8 105 80.0
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 5.5e-38 161.0 105 78.1
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 7.1e-38 160.6 110 72.7
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 7.1e-38 160.6 104 75.0
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 7.1e-38 160.6 113 72.6
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 1.2e-37 159.8 110 72.7
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 1.2e-37 159.8 110 72.7
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 1.2e-37 159.8 110 72.7
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 1.2e-37 159.8 110 72.7
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 1.2e-37 159.8 110 72.7
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 1.6e-37 159.5 110 70.9
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.6e-37 159.5 116 71.6
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 1.6e-37 159.5 110 77.3
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 1.6e-37 159.5 109 75.2
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 1.6e-37 159.5 116 73.3
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.6e-37 159.5 115 71.3
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 2.1e-37 159.1 110 72.7
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 2.1e-37 159.1 114 70.2
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 2.7e-37 158.7 115 70.4
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 3.5e-37 158.3 110 75.5
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 3.5e-37 158.3 109 74.3
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 4.6e-37 157.9 117 70.1
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 4.6e-37 157.9 114 71.9
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 4.6e-37 157.9 110 73.6
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 4.6e-37 157.9 111 71.2
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 6.0e-37 157.5 110 71.8
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 6.0e-37 157.5 110 71.8
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 7.9e-37 157.1 105 77.1
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 1.3e-36 156.4 109 70.6
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 2.3e-36 155.6 107 72.9
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 2.3e-36 155.6 110 75.5
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 3.0e-36 155.2 103 77.7
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 3.9e-36 154.8 110 70.9
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 3.9e-36 154.8 119 67.2
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 8.7e-36 153.7 110 72.7
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 1.5e-35 152.9 113 63.7
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.9e-35 152.5 110 70.9
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 3.3e-35 151.8 106 72.6
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 1.3e-34 149.8 117 68.4
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 1.3e-34 149.8 109 72.5
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 1.6e-34 149.4 115 68.7
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 2.8e-34 148.7 105 74.3
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 6.2e-34 147.5 110 70.0
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 8.1e-34 147.1 108 63.9
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 1.5e-32 142.9 114 67.5
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 3.4e-32 141.7 104 70.2
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 3.4e-32 141.7 110 67.3
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 1.7e-31 139.4 94 72.3
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.2e-30 135.2 137 56.9
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.1e-29 132.5 89 75.3
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 2.1e-29 132.5 82 81.7
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 3.5e-29 131.7 169 46.2
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 6.0e-29 131.0 83 79.5
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.3e-28 129.8 84 81.0
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.3e-28 129.0 89 73.0
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.0e-28 128.6 87 72.4
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 3.0e-28 128.6 92 73.9
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 3.9e-28 128.3 89 78.7
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 6.7e-28 127.5 82 79.3
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 6.7e-28 127.5 89 73.0
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 8.7e-28 127.1 88 75.0
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.1e-27 126.7 90 72.2
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 4.3e-27 124.8 89 73.0
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 2.8e-26 122.1 87 71.3
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 1.1e-25 120.2 82 74.4
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 1.1e-25 120.2 88 70.5
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.1e-25 118.6 95 67.4
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 3.1e-25 118.6 116 61.2
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 6.9e-25 117.5 72 80.6
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 6.7e-20 100.9 79 68.4
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 5.7e-19 97.8 82 59.8
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 9.7e-19 97.1 106 51.9
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 2.2e-18 95.9 64 76.6
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 6.9e-17 90.9 117 51.3
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.8e-15 85.1 52 80.8
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 6.5e-15 84.3 69 63.8
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 8.5e-15 84.0 54 75.9
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.0e-12 77.0 53 69.8
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 2.3e-12 75.9 121 39.7
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 6.7e-12 74.3 61 65.6
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 4.8e-10 68.2 105 41.0


User provided reference genes

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