Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5325 Papaver somniferum HOM05D002119 ORTHO05D002209 5.9e-59 230.7 121 100.0
PSO675G0158 Papaver somniferum HOM05D002119 ORTHO05D002209 4.7e-56 221.1 117 99.1
PSO675G0847 Papaver somniferum HOM05D002119 ORTHO05D002209 5.0e-42 174.5 122 81.1
PSO675G0800 Papaver somniferum HOM05D002119 ORTHO05D002209 1.1e-41 173.3 123 80.5
Nn5g29745 Nelumbo nucifera HOM05D002119 ORTHO05D002209 3.2e-28 128.6 125 62.4
Atru.chr13.928 Acer truncatum HOM05D002119 ORTHO05D002209 7.0e-28 127.5 123 56.9
QL12p040240 Quercus lobata HOM05D002119 ORTHO05D002209 1.0e-26 123.6 121 61.2
Dinv22021 Davidia involucrata HOM05D002119 ORTHO05D002209 2.3e-26 122.5 117 60.7
CDE01G0478 Ceratophyllum demersum HOM05D002119 ORTHO05D002209 1.1e-25 120.2 125 54.4
Cfa020695 Carpinus fangiana HOM05D002119 ORTHO05D002209 1.5e-25 119.8 117 58.1
Dinv44896 Davidia involucrata HOM05D002119 ORTHO05D002209 1.5e-25 119.8 117 59.8
Rhsim07G0215000 Rhododendron simsii HOM05D002119 ORTHO05D002209 2.5e-25 119.0 118 60.2
TWI56G0097 Tripterygium wilfordii HOM05D002119 ORTHO05D002209 3.3e-25 118.6 118 55.1
TAR381G0137 Trochodendron aralioides HOM05D002119 ORTHO05D002209 4.3e-25 118.2 117 59.8
CSS0027091 Camellia sinensis var. sinensis HOM05D002119 ORTHO05D002209 5.6e-25 117.9 118 59.3
Cpa.g.sc366.1 Carica papaya HOM05D002119 ORTHO05D002209 5.6e-25 117.9 118 58.5
GSVIVG01009243001 Vitis vinifera HOM05D002119 ORTHO05D002209 9.5e-25 117.1 125 54.4
Aqoxy6G00614 Aquilegia oxysepala HOM05D002119 ORTHO05D002209 1.2e-24 116.7 123 56.1
Haze_19000 Corylus avellana HOM05D002119 ORTHO05D002209 1.6e-24 116.3 117 56.4
RcHm_v2.0_Chr7g0232721 Rosa chinensis HOM05D002119 ORTHO05D002209 2.1e-24 115.9 124 54.8
FAN04G1801 Fragaria x ananassa HOM05D002119 ORTHO05D002209 2.8e-24 115.5 123 54.5
MD15G1393300 Malus domestica HOM05D002119 ORTHO05D002209 2.8e-24 115.5 121 56.2
Manes.18G054500 Manihot esculenta HOM05D002119 ORTHO05D002209 2.8e-24 115.5 120 55.8
TWI12G1107 Tripterygium wilfordii HOM05D002119 ORTHO05D002209 2.8e-24 115.5 118 55.1
CiPaw.16G101600 Carya illinoinensis HOM05D002119 ORTHO05D002209 1.0e-23 113.6 117 57.3
COL.COLO4_35342 Corchorus olitorius HOM05D002119 ORTHO05D002209 1.4e-23 113.2 118 52.5
CANSAT25G3498 Cannabis sativa HOM05D002119 ORTHO05D002209 1.8e-23 112.8 117 55.6
FvH4_5g33710 Fragaria vesca HOM05D002119 ORTHO05D002209 2.3e-23 112.5 123 53.7
FAN18G1236 Fragaria x ananassa HOM05D002119 ORTHO05D002209 2.3e-23 112.5 123 53.7
Ciclev10002279m.g Citrus clementina HOM05D002119 ORTHO05D002209 5.2e-23 111.3 121 52.9
Prupe.1G541600 Prunus persica HOM05D002119 ORTHO05D002209 5.2e-23 111.3 123 52.8
Migut.N02828 Erythranthe guttata HOM05D002119 ORTHO05D002209 6.8e-23 110.9 121 52.1
Lj1C1165G2 Lonicera japonica HOM05D002119 ORTHO05D002209 6.8e-23 110.9 117 54.7
Duzib116G0527 Durio zibethinus HOM05D002119 ORTHO05D002209 1.2e-22 110.2 118 54.2
FAN08G2379 Fragaria x ananassa HOM05D002119 ORTHO05D002209 1.5e-22 109.8 123 52.8
Glyma.04G089400 Glycine max HOM05D002119 ORTHO05D002209 2.6e-22 109.0 118 50.0
HanXRQChr02g0045991 Helianthus annuus HOM05D002119 ORTHO05D002209 2.6e-22 109.0 119 53.8
Sabra02G0084400 Salix brachista HOM05D002119 ORTHO05D002209 2.6e-22 109.0 95 60.0
Actinidia29646 Actinidia chinensis HOM05D002119 ORTHO05D002209 4.4e-22 108.2 118 56.8
Potri.002G107400 Populus trichocarpa HOM05D002119 ORTHO05D002209 5.8e-22 107.8 120 52.5
vmacro04618 Vaccinium macrocarpon HOM05D002119 ORTHO05D002209 5.8e-22 107.8 133 53.4
Glyma.06G091300 Glycine max HOM05D002119 ORTHO05D002209 7.5e-22 107.5 118 50.0
Eucgr.F02175 Eucalyptus grandis HOM05D002119 ORTHO05D002209 9.8e-22 107.1 119 52.9
Gohir.A05G215400 Gossypium hirsutum HOM05D002119 ORTHO05D002209 9.8e-22 107.1 118 54.2
THA.LOC104799842 Tarenaya hassleriana HOM05D002119 ORTHO05D002209 1.7e-21 106.3 118 51.7
Nitab4.5_0000377g0160 Nicotiana tabacum HOM05D002119 ORTHO05D002209 6.4e-21 104.4 125 49.6
PGR009G0002 Punica granatum HOM05D002119 ORTHO05D002209 8.3e-21 104.0 120 49.2
PGR148G0002 Punica granatum HOM05D002119 ORTHO05D002209 8.3e-21 104.0 120 49.2
Oeu008651.1 Olea europaea HOM05D002119 ORTHO05D002209 1.1e-20 103.6 122 48.4
AL1G41030 Arabidopsis lyrata HOM05D002119 ORTHO05D002209 1.4e-20 103.2 124 47.6
SGA_v2.0_scaffold28G11865 Striga asiatica HOM05D002119 ORTHO05D002209 1.4e-20 103.2 121 51.2
Cc10_g08140 Coffea canephora HOM05D002119 ORTHO05D002209 2.4e-20 102.4 117 49.6
Gohir.A01G125350 Gossypium hirsutum HOM05D002119 ORTHO05D002209 2.4e-20 102.4 118 50.0
Nitab4.5_0008951g0020 Nicotiana tabacum HOM05D002119 ORTHO05D002209 3.2e-20 102.1 125 49.6
THA.LOC104825811 Tarenaya hassleriana HOM05D002119 ORTHO05D002209 3.2e-20 102.1 117 51.3
Gorai.002G137700 Gossypium raimondii HOM05D002119 ORTHO05D002209 4.1e-20 101.7 118 49.2
Gohir.D01G112900 Gossypium hirsutum HOM05D002119 ORTHO05D002209 5.4e-20 101.3 118 49.2
BcaC01g06943 Brassica carinata HOM05D002119 ORTHO05D002209 7.0e-20 100.9 125 47.2
A09p38460 Brassica napus HOM05D002119 ORTHO05D002209 7.0e-20 100.9 125 47.2
Lsat_1_v5_gn_1_741 Lactuca sativa HOM05D002119 ORTHO05D002209 7.0e-20 100.9 119 51.3
SalBow2G2525 Salvia bowleyana HOM05D002119 ORTHO05D002209 1.2e-19 100.1 121 48.8
BraA09t39354Z Brassica rapa HOM05D002119 ORTHO05D002209 1.6e-19 99.8 125 46.4
Oeu008411.2 Olea europaea HOM05D002119 ORTHO05D002209 1.6e-19 99.8 122 45.9
Aa31LG7G10110 Aethionema arabicum HOM05D002119 ORTHO05D002209 2.0e-19 99.4 118 48.3
Thhalv10006574m.g Eutrema salsugineum HOM05D002119 ORTHO05D002209 2.0e-19 99.4 124 46.8
AT1G27595 Arabidopsis thaliana HOM05D002119 ORTHO05D002209 2.7e-19 99.0 124 46.8
Medtr3g111090 Medicago truncatula HOM05D002119 ORTHO05D002209 2.7e-19 99.0 118 44.1
Carub.0001s2611 Capsella rubella HOM05D002119 ORTHO05D002209 3.5e-19 98.6 124 46.8
Psat5g017960 Pisum sativum HOM05D002119 ORTHO05D002209 3.5e-19 98.6 118 44.9
arahy.Tifrunner.gnm1.ann1.JKCM11 Arachis hypogaea HOM05D002119 ORTHO05D002209 4.6e-19 98.2 119 46.2
arahy.Tifrunner.gnm1.ann1.P626UD Arachis hypogaea HOM05D002119 ORTHO05D002209 4.6e-19 98.2 119 46.2
A08p26200 Brassica napus HOM05D002119 ORTHO05D002209 4.6e-19 98.2 119 47.1
BraA08t34571Z Brassica rapa HOM05D002119 ORTHO05D002209 4.6e-19 98.2 119 47.1
ClCG11G014870 Citrullus lanatus HOM05D002119 ORTHO05D002209 6.0e-19 97.8 117 48.7
PGR031G0226 Punica granatum HOM05D002119 ORTHO05D002209 6.0e-19 97.8 121 47.9
Phvul.009G146300 Phaseolus vulgaris HOM05D002119 ORTHO05D002209 7.8e-19 97.4 118 48.3
Lj1g0024990 Lotus japonicus HOM05D002119 ORTHO05D002209 1.0e-18 97.1 118 44.9
Sp1g23810 Schrenkiella parvula HOM05D002119 ORTHO05D002209 1.0e-18 97.1 124 46.0
BcaC05g26755 Brassica carinata HOM05D002119 ORTHO05D002209 1.3e-18 96.7 125 45.6
CARHR027140 Cardamine hirsuta HOM05D002119 ORTHO05D002209 1.3e-18 96.7 124 46.0
Sc02g0008370 Simmondsia chinensis HOM05D002119 ORTHO05D002209 3.0e-18 95.5 125 49.6
VMungo1309G2894 Vigna mungo HOM05D002119 ORTHO05D002209 3.0e-18 95.5 118 47.5
Sed0001338 Sechium edule HOM05D002119 ORTHO05D002209 3.9e-18 95.1 117 47.9
MSTRG.24416 Avicennia marina HOM05D002119 ORTHO05D002209 5.0e-18 94.7 121 47.1
SHI08807 Sapria himalayana HOM05D002119 ORTHO05D002209 5.0e-18 94.7 120 47.5
Peaxi162Scf00626g00616 Petunia axillaris HOM05D002119 ORTHO05D002209 8.6e-18 94.0 111 45.9
BcaC01g01600 Brassica carinata HOM05D002119 ORTHO05D002209 1.1e-17 93.6 119 46.2
BcaC05g26572 Brassica carinata HOM05D002119 ORTHO05D002209 1.1e-17 93.6 118 46.6
C03p74250 Brassica napus HOM05D002119 ORTHO05D002209 1.1e-17 93.6 119 46.2
Ca_15549_v3 Cicer arietinum L. HOM05D002119 ORTHO05D002209 2.5e-17 92.4 118 41.5
BolC3t19683H Brassica oleracea HOM05D002119 ORTHO05D002209 3.3e-17 92.0 119 45.4
Lalb_Chr08g0242721 Lupinus albus HOM05D002119 ORTHO05D002209 4.3e-17 91.7 118 44.1
C05p26230 Brassica napus HOM05D002119 ORTHO05D002209 5.6e-17 91.3 118 45.8
BolC5t31336H Brassica oleracea HOM05D002119 ORTHO05D002209 5.6e-17 91.3 118 45.8
DCAR_019334 Daucus carota HOM05D002119 ORTHO05D002209 5.6e-17 91.3 122 45.9
Sopen04g030560 Solanum pennellii HOM05D002119 ORTHO05D002209 7.3e-17 90.9 117 46.2
MELO3C003489.2 Cucumis melo HOM05D002119 ORTHO05D002209 1.2e-16 90.1 117 46.2
unitig_21.g20303 Utricularia gibba HOM05D002119 ORTHO05D002209 1.2e-16 90.1 118 39.8
Solyc04g076900.2 Solanum lycopersicum HOM05D002119 ORTHO05D002209 1.6e-16 89.7 117 45.3
CsaV3_3G048300 Cucumis sativus L. HOM05D002119 ORTHO05D002209 6.2e-16 87.8 117 45.3
Sopen00g006280 Solanum pennellii HOM05D002119 ORTHO05D002209 6.2e-16 87.8 117 44.4
Lalb_Chr11g0064761 Lupinus albus HOM05D002119 ORTHO05D002209 1.1e-15 87.0 118 41.5
ATR0767G254 Amborella trichopoda HOM05D002119 ORTHO05D002209 1.4e-15 86.7 117 45.3
Mapoly0035s0121 Marchantia polymorpha HOM05D002119 ORTHO05D002209 2.3e-10 69.3 128 36.7
Pp3c2_10640 Physcomitrium patens HOM05D002119 ORTHO05D002209 2.3e-10 69.3 120 35.0
MBI14_g09758_MAGBIO Magnolia biondii HOM05D002119 ORTHO05D002209 3.3e-09 65.5 124 33.1
Nn2g10847 Nelumbo nucifera HOM05D002119 ORTHO05D002209 3.3e-09 65.5 121 35.5
ATR0681G274 Amborella trichopoda HOM05D002119 ORTHO05D002209 3.6e-08 62.0 95 33.7
AagrBONN_evm.TU.Sc2ySwM_362.1261 Anthoceros agrestis HOM05D002119 ORTHO05D002209 1.8e-07 59.7 120 30.0
Pp3c12_4780 Physcomitrium patens HOM05D000853 ORTHO05D000723 2.0e-06 56.2 118 29.7
Hund05234 Selenicereus undatus HOM05D002119 ORTHO05D002209 2.6e-06 55.8 67 56.7
Hund11005 Selenicereus undatus HOM05D002119 ORTHO05D002209 3.4e-06 55.5 94 30.9
Dinv23114 Davidia involucrata HOM05D002119 ORTHO05D002209 4.4e-06 55.1 97 29.9
AT1G27570 Arabidopsis thaliana HOM05D002119 ORTHO05D015955 5.8e-06 54.7 124 35.5
PSO339G0569 Papaver somniferum HOM05D002119 ORTHO05D002209 5.8e-06 54.7 125 29.6
Manes.09G105300 Manihot esculenta HOM05D002119 ORTHO05D002209 9.9e-06 53.9 119 26.1
THA.LOC104816196 Tarenaya hassleriana HOM05D002119 ORTHO05D002209 9.9e-06 53.9 76 36.8


User provided reference genes

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