Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 9.7e-206 719.9 367 100.0
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 7.3e-145 517.7 277 94.9
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 8.5e-101 371.3 275 67.6
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 8.5e-101 371.3 275 67.6
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 8.5e-101 371.3 275 67.6
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 4.2e-100 369.0 274 67.5
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 1.8e-98 363.6 273 65.9
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 3.9e-98 362.5 276 66.7
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 6.7e-98 361.7 278 66.2
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 1.7e-96 357.1 275 65.1
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 4.1e-95 352.4 277 64.3
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 9.1e-95 351.3 275 65.1
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 2.0e-94 350.1 277 63.9
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 5.9e-94 348.6 276 62.7
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 7.7e-94 348.2 276 62.3
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 6.5e-93 345.1 276 64.9
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 1.4e-92 344.0 297 62.3
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 2.5e-92 343.2 276 62.7
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 3.2e-92 342.8 275 62.2
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.2e-91 340.9 276 63.0
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 2.1e-91 340.1 275 63.6
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.7e-91 339.7 276 63.4
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 3.6e-91 339.3 275 63.6
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 3.6e-91 339.3 276 64.1
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 6.1e-91 338.6 276 63.8
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 7.9e-91 338.2 276 63.0
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.0e-90 337.8 278 62.2
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.0e-90 337.8 278 62.2
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 1.4e-90 337.4 277 63.5
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.3e-90 336.7 276 62.7
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 2.3e-90 336.7 276 61.2
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 6.7e-90 335.1 277 59.6
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 1.5e-89 334.0 275 62.2
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 2.0e-89 333.6 276 61.2
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 4.4e-89 332.4 276 61.2
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 5.7e-89 332.0 276 61.2
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.3e-88 330.9 277 61.7
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 1.3e-88 330.9 276 60.5
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.7e-88 330.5 277 59.9
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 2.2e-88 330.1 276 61.6
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 2.8e-88 329.7 275 61.1
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 2.8e-88 329.7 280 62.5
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 8.2e-88 328.2 276 60.1
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.8e-87 327.0 276 60.1
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 1.8e-87 327.0 277 61.0
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 4.1e-87 325.9 276 60.5
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 4.1e-87 325.9 276 59.8
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 5.3e-87 325.5 276 59.8
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 7.0e-87 325.1 318 53.1
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 1.2e-86 324.3 277 61.0
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 1.6e-86 323.9 276 60.5
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.6e-86 323.9 275 58.2
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 2.0e-86 323.6 276 61.6
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 2.0e-86 323.6 276 59.1
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 2.6e-86 323.2 286 57.0
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 2.6e-86 323.2 277 59.9
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 3.5e-86 322.8 276 59.4
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 5.9e-86 322.0 277 58.1
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 5.9e-86 322.0 276 59.4
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 7.7e-86 321.6 276 59.4
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 1.3e-85 320.9 272 59.2
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 3.8e-85 319.3 275 58.5
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.1e-84 317.8 275 57.5
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 1.5e-84 317.4 276 59.1
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 2.5e-84 316.6 276 59.1
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 4.2e-84 315.8 276 58.3
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 4.7e-83 312.4 275 55.6
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 3.3e-81 306.2 276 56.9
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 8.2e-80 301.6 290 55.2
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 2.7e-78 296.6 277 55.2
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 2.9e-77 293.1 278 53.6
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 3.8e-77 292.7 278 53.6
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 3.2e-76 289.7 279 54.8
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 5.5e-76 288.9 277 56.0
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 9.4e-76 288.1 277 54.5
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 1.2e-75 287.7 278 53.6
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 3.6e-75 286.2 278 55.0
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 8.0e-75 285.0 279 53.8
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 8.0e-75 285.0 279 53.8
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 6.8e-74 282.0 276 53.6
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 2.0e-73 280.4 276 53.3
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 3.4e-73 279.6 278 52.9
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 4.4e-73 279.3 279 53.0
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 4.4e-73 279.3 278 52.5
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 3.1e-71 273.1 280 51.8
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 1.5e-68 264.2 279 52.3
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 8.0e-67 258.5 275 48.7
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 8.6e-61 238.4 274 49.6
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 1.2e-59 234.6 210 55.2
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 3.2e-55 219.9 284 43.7
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 5.4e-55 219.2 288 44.4
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.1e-50 204.9 188 57.4
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 4.1e-47 193.0 135 68.9
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 2.0e-46 190.7 269 40.1
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 1.3e-40 171.4 159 56.6
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 6.4e-40 169.1 123 65.0
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 4.6e-30 136.3 247 38.9
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 4.6e-30 136.3 270 32.2
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 1.4e-26 124.8 183 42.1
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 4.0e-26 123.2 117 53.0
PSO063G2932 Papaver somniferum HOM05D000003 ORTHO05D001026 5.2e-26 122.9 101 54.5
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 1.5e-25 121.3 270 31.5
PSO063G6230 Papaver somniferum HOM05D000003 ORTHO05D001026 1.5e-25 121.3 86 62.8
PSO675G4029 Papaver somniferum HOM05D000003 ORTHO05D001026 1.5e-25 121.3 104 52.9
PSO063G7317 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-25 120.6 107 51.4
PSO339G5610 Papaver somniferum HOM05D000003 ORTHO05D001026 2.2e-24 117.5 101 51.5
PSO500G0047 Papaver somniferum HOM05D000003 ORTHO05D000004 3.8e-24 116.7 124 45.2
PSO017G3512 Papaver somniferum HOM05D000003 ORTHO05D000004 6.4e-24 115.9 123 45.5
PSO210G3826 Papaver somniferum HOM05D000003 ORTHO05D001026 6.4e-24 115.9 107 52.3
PSO782G1251 Papaver somniferum HOM05D000003 ORTHO05D000004 6.4e-24 115.9 89 59.6
PSO447G0103 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-23 115.2 82 62.2
PSO832G3105 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-23 114.4 80 60.0
PSO017G7152 Papaver somniferum HOM05D000003 ORTHO05D000004 2.4e-23 114.0 87 57.5
PSO509G0029 Papaver somniferum HOM05D000003 ORTHO05D000004 2.4e-23 114.0 107 49.5
PSO170G6658 Papaver somniferum HOM05D000003 ORTHO05D000004 5.4e-23 112.8 78 66.7
PSO210G2436 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-23 112.5 107 50.5
PSO063G5359 Papaver somniferum HOM05D000003 ORTHO05D000004 2.1e-22 110.9 80 61.2
PSO223G0068 Papaver somniferum HOM05D001060 ORTHO05D000905 2.1e-22 110.9 101 47.5
PSO675G4474 Papaver somniferum HOM05D000003 ORTHO05D000004 2.1e-22 110.9 87 55.2
PSO063G3049 Papaver somniferum HOM05D000003 ORTHO05D000004 6.0e-22 109.4 80 58.8
PSO017G6289 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-21 107.8 85 56.5
PSO782G2954 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-21 107.8 79 63.3
PSO455G0112 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-21 107.5 116 44.0
PSO832G0613 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-21 107.5 124 41.1
PSO339G0937 Papaver somniferum HOM05D000003 ORTHO05D000004 3.9e-21 106.7 73 67.1
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 5.1e-21 106.3 138 41.3
PSO210G7201 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-20 105.1 85 57.6
PSO079G0063 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-20 104.4 84 58.3
PSO170G2698 Papaver somniferum HOM05D000003 ORTHO05D001026 2.5e-20 104.0 78 62.8
PSO455G0118 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-19 101.7 84 56.0
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.8e-18 97.8 267 29.6
PSO339G6660 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-18 97.8 85 48.2
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 4.0e-18 96.7 112 47.3
PSO782G4600 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-15 85.9 58 58.6
PSO675G2348 Papaver somniferum HOM05D016118 ORTHO05D001026 9.3e-15 85.5 79 55.7
PSO063G3064 Papaver somniferum HOM05D000003 ORTHO05D001026 1.0e-13 82.0 80 52.5
PSO339G0577 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-13 81.3 61 59.0
PSO478G4926 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-13 80.5 108 40.7
PSO761G0383 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-13 80.5 98 46.9
PSO170G3919 Papaver somniferum HOM05D000003 ORTHO05D001026 3.3e-12 77.0 54 63.0
PSO170G2564 Papaver somniferum HOM05D000003 ORTHO05D000004 2.1e-11 74.3 62 56.5
PSO063G0448 Papaver somniferum HOM05D000003 ORTHO05D000006 3.7e-11 73.6 57 59.6
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 4.8e-11 73.2 83 39.8
MCO11G003 Micromonas commoda HOM05D007317 ORTHO05D009299 6.2e-11 72.8 290 23.8
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 1.4e-10 71.6 299 26.1
PSO699G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-09 68.6 44 59.1
PSO447G0119 Papaver somniferum HOM05D000003 ORTHO05D001026 1.3e-08 65.1 49 63.3
PSO675G8305 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-08 65.1 49 61.2
PSO782G1558 Papaver somniferum HOM05D000003 ORTHO05D000004 2.4e-07 60.8 41 65.9
PSO210G2840 Papaver somniferum HOM05D000003 ORTHO05D001026 7.9e-06 55.8 80 37.5


User provided reference genes

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