Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5075 Papaver somniferum HOM05D004356 ORTHO05D005542 1.4e-229 799.3 397 100.0
PSO017G1942 Papaver somniferum HOM05D004356 ORTHO05D005542 6.0e-201 704.1 396 89.1
PSO675G0521 Papaver somniferum HOM05D004356 ORTHO05D005542 5.8e-196 687.6 395 86.8
TAR381G1323 Trochodendron aralioides HOM05D004356 ORTHO05D005542 3.8e-171 605.1 397 75.6
GSVIVG01009120001 Vitis vinifera HOM05D004356 ORTHO05D005542 6.4e-171 604.4 403 75.7
Ah.05g170540 Amaranthus hybridus HOM05D004356 ORTHO05D005542 1.8e-168 596.3 353 81.0
Dinv42649 Davidia involucrata HOM05D004356 ORTHO05D005542 2.3e-168 595.9 407 74.0
CSS0046210 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 1.1e-167 593.6 405 73.3
Aqoxy3G00172 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 9.6e-167 590.5 397 73.3
ECA247G0627 Erigeron canadensis HOM05D004356 ORTHO05D005542 8.1e-166 587.4 412 71.4
RcHm_v2.0_Chr1g0327751 Rosa chinensis HOM05D004356 ORTHO05D005542 1.1e-165 587.0 353 80.5
RcHm_v2.0_Chr7g0237731 Rosa chinensis HOM05D004356 ORTHO05D005542 5.3e-165 584.7 396 74.2
AUR62027839 Chenopodium quinoa HOM05D004356 ORTHO05D005542 1.2e-164 583.6 355 80.0
MD15G1379800 Malus domestica HOM05D004356 ORTHO05D005542 1.2e-164 583.6 402 72.4
MD00G1136500 Malus domestica HOM05D004356 ORTHO05D005542 1.5e-164 583.2 402 73.6
MELO3C011060.2 Cucumis melo HOM05D004356 ORTHO05D005542 3.4e-164 582.0 405 71.4
CsaV3_2G030020 Cucumis sativus L. HOM05D004356 ORTHO05D005542 3.4e-164 582.0 405 71.1
Nitab4.5_0004523g0040 Nicotiana tabacum HOM05D004356 ORTHO05D005542 3.4e-164 582.0 400 70.8
Actinidia33114 Actinidia chinensis HOM05D004356 ORTHO05D005542 5.8e-164 581.3 392 74.5
QL09p016893 Quercus lobata HOM05D004356 ORTHO05D005542 5.8e-164 581.3 401 72.6
CAN.G992.8 Capsicum annuum HOM05D004356 ORTHO05D005542 9.9e-164 580.5 398 72.6
FAN18G3440 Fragaria x ananassa HOM05D004356 ORTHO05D005542 1.7e-163 579.7 393 74.0
FvH4_5g36000 Fragaria vesca HOM05D004356 ORTHO05D005542 2.2e-163 579.3 393 74.0
Gohir.A05G222100 Gossypium hirsutum HOM05D004356 ORTHO05D005542 6.4e-163 577.8 345 80.3
Nitab4.5_0001788g0020 Nicotiana tabacum HOM05D004356 ORTHO05D005542 8.4e-163 577.4 400 70.2
Lsat_1_v5_gn_1_2520 Lactuca sativa HOM05D004356 ORTHO05D005542 1.9e-162 576.2 409 70.9
FAN04G0906 Fragaria x ananassa HOM05D004356 ORTHO05D005542 2.5e-162 575.9 393 73.8
Sopen01g032880 Solanum pennellii HOM05D004356 ORTHO05D005542 2.5e-162 575.9 345 79.1
Rhsim07G0209000 Rhododendron simsii HOM05D004356 ORTHO05D005542 3.2e-162 575.5 420 70.0
CANSAT21G1617 Cannabis sativa HOM05D004356 ORTHO05D005542 5.5e-162 574.7 407 72.5
PGSC0003DMG400001802 Solanum tuberosum HOM05D004356 ORTHO05D005542 5.5e-162 574.7 396 72.5
Sed0016629 Sechium edule HOM05D004356 ORTHO05D005542 9.3e-162 573.9 402 71.4
Atru.chr13.1064 Acer truncatum HOM05D004356 ORTHO05D005542 1.2e-161 573.5 409 71.1
Atru.chr13.1070 Acer truncatum HOM05D004356 ORTHO05D005542 1.2e-161 573.5 409 71.1
Oeu025262.1 Olea europaea HOM05D004356 ORTHO05D005542 1.6e-161 573.2 332 81.3
vmacro04684 Vaccinium macrocarpon HOM05D004356 ORTHO05D005542 3.5e-161 572.0 419 69.9
COL.COLO4_11966 Corchorus olitorius HOM05D004356 ORTHO05D005542 4.6e-161 571.6 406 70.7
Duzib093G1902 Durio zibethinus HOM05D004356 ORTHO05D005542 4.6e-161 571.6 398 72.6
TWI56G1415 Tripterygium wilfordii HOM05D004356 ORTHO05D005542 7.9e-161 570.9 406 69.7
Ca_19032_v3 Cicer arietinum L. HOM05D004356 ORTHO05D005542 1.0e-160 570.5 406 72.9
Gohir.D05G224800 Gossypium hirsutum HOM05D004356 ORTHO05D005542 2.3e-160 569.3 361 76.5
EL10Ac9g21432 Beta vulgaris HOM05D000128 ORTHO05D005542 3.0e-160 568.9 347 79.3
Aqoxy1G00182 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 5.1e-160 568.2 363 75.5
Hund16880 Selenicereus undatus HOM05D004356 ORTHO05D005542 6.7e-160 567.8 411 70.6
Solyc01g081300.4 Solanum lycopersicum HOM05D004356 ORTHO05D005542 6.7e-160 567.8 395 70.9
Phvul.008G178500 Phaseolus vulgaris HOM05D004356 ORTHO05D005542 8.7e-160 567.4 347 79.8
Cc10_g15440 Coffea canephora HOM05D004356 ORTHO05D005542 1.5e-159 566.6 408 70.8
Glyma.14G178900 Glycine max HOM05D004356 ORTHO05D005542 1.9e-159 566.2 335 80.6
Gorai.009G232200 Gossypium raimondii HOM05D004356 ORTHO05D005542 2.5e-159 565.8 398 71.1
FAN08G0112 Fragaria x ananassa HOM05D004356 ORTHO05D005542 4.3e-159 565.1 420 69.3
Cc10_g15470 Coffea canephora HOM05D004356 ORTHO05D005542 7.4e-159 564.3 410 71.2
Haze_22357 Corylus avellana HOM05D004356 ORTHO05D005542 1.3e-158 563.5 442 67.0
Migut.M02007 Erythranthe guttata HOM05D004356 ORTHO05D005542 3.7e-158 562.0 333 79.6
HanXRQChr02g0040341 Helianthus annuus HOM05D004356 ORTHO05D005542 3.7e-158 562.0 406 67.5
Medtr5g065270 Medicago truncatula HOM05D004356 ORTHO05D005542 3.7e-158 562.0 388 72.7
Manes.18G062300 Manihot esculenta HOM05D004356 ORTHO05D005542 8.2e-158 560.8 399 70.2
Cc07_g18320 Coffea canephora HOM05D004356 ORTHO05D005542 1.1e-157 560.5 341 78.3
SalBow8G3481 Salvia bowleyana HOM05D004356 ORTHO05D005542 1.4e-157 560.1 391 70.1
Psat2g068800 Pisum sativum HOM05D004356 ORTHO05D005542 1.8e-157 559.7 407 71.3
CSS0005507 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 2.4e-157 559.3 405 70.4
Peaxi162Scf00592g00454 Petunia axillaris HOM05D004356 ORTHO05D005542 3.1e-157 558.9 425 66.6
TPR.G16206 Trifolium pratense HOM05D004356 ORTHO05D005542 4.0e-157 558.5 403 70.2
Ciclev10001304m.g Citrus clementina HOM05D004356 ORTHO05D005542 2.0e-156 556.2 400 70.0
TPR.G30120 Trifolium pratense HOM05D004356 ORTHO05D005542 2.0e-156 556.2 404 70.8
MSTRG.16368 Avicennia marina HOM05D004356 ORTHO05D005542 2.6e-156 555.8 392 69.4
CDE04G0095 Ceratophyllum demersum HOM05D004356 ORTHO05D005542 2.6e-156 555.8 384 73.2
Glyma.02G211300 Glycine max HOM05D004356 ORTHO05D005542 4.5e-156 555.1 356 76.7
SGA_v2.0_scaffold175G39331 Striga asiatica HOM05D004356 ORTHO05D005542 4.5e-156 555.1 395 71.4
THA.LOC104816870 Tarenaya hassleriana HOM05D004356 ORTHO05D005542 1.0e-155 553.9 409 67.5
Lj1g0019049 Lotus japonicus HOM05D004356 ORTHO05D005542 1.3e-155 553.5 405 71.1
Eucgr.F00397 Eucalyptus grandis HOM05D004356 ORTHO05D005542 1.7e-155 553.1 369 73.2
Lalb_Chr10g0102631 Lupinus albus HOM05D004356 ORTHO05D005542 1.7e-155 553.1 395 71.9
CiPaw.16G056200 Carya illinoinensis HOM05D004356 ORTHO05D005542 3.8e-155 552.0 403 69.0
PGR102G1623 Punica granatum HOM05D004356 ORTHO05D005542 3.8e-155 552.0 400 70.5
arahy.Tifrunner.gnm1.ann1.VLAW7V Arachis hypogaea HOM05D004356 ORTHO05D005542 4.9e-155 551.6 339 78.2
Dinv44826 Davidia involucrata HOM05D004356 ORTHO05D005542 4.9e-155 551.6 367 74.7
arahy.Tifrunner.gnm1.ann1.QY7301 Arachis hypogaea HOM05D004356 ORTHO05D005542 6.5e-155 551.2 339 78.5
VMungo0647G1889 Vigna mungo HOM05D004356 ORTHO05D005542 1.4e-154 550.1 392 71.2
ATR0022G038 Amborella trichopoda HOM05D004356 ORTHO05D005542 5.5e-154 548.1 333 76.6
arahy.Tifrunner.gnm1.ann1.JC6ZCB Arachis hypogaea HOM05D004356 ORTHO05D005542 7.1e-154 547.7 389 70.7
unitig_37.g12048 Utricularia gibba HOM05D004356 ORTHO05D005542 3.9e-152 542.0 355 71.3
AUR62018997 Chenopodium quinoa HOM05D004356 ORTHO05D005542 5.1e-152 541.6 327 80.4
Thhalv10020825m.g Eutrema salsugineum HOM05D004356 ORTHO05D005542 5.1e-152 541.6 333 76.0
A01p33740 Brassica napus HOM05D004356 ORTHO05D005542 6.7e-152 541.2 333 76.3
Lj1g0006758 Lotus japonicus HOM05D004356 ORTHO05D005542 6.7e-152 541.2 339 77.6
Os09g0467100 Oryza sativa ssp. japonica HOM05D004356 ORTHO05D005542 5.7e-151 538.1 344 74.7
Thecc.08G065800 Theobroma cacao HOM05D004356 ORTHO05D005542 2.2e-150 536.2 298 85.6
BraA01t03487Z Brassica rapa HOM05D004356 ORTHO05D005542 2.8e-150 535.8 337 75.7
Duzib106G0787 Durio zibethinus HOM05D004356 ORTHO05D005542 4.8e-150 535.0 396 69.4
BcaB04g19136 Brassica carinata HOM05D004356 ORTHO05D005542 6.3e-150 534.6 335 74.6
BolC3t17429H Brassica oleracea HOM05D004356 ORTHO05D005542 6.3e-150 534.6 334 75.1
BraA03t13356Z Brassica rapa HOM05D004356 ORTHO05D005542 6.3e-150 534.6 337 75.7
CARHR096940 Cardamine hirsuta HOM05D004356 ORTHO05D005542 1.1e-149 533.9 345 73.3
AL3G35050 Arabidopsis lyrata HOM05D004356 ORTHO05D005542 1.8e-149 533.1 349 72.5
Zm00001eb284720 Zea mays HOM05D004356 ORTHO05D005542 2.4e-149 532.7 348 74.1
Aa31LG8G7830 Aethionema arabicum HOM05D004356 ORTHO05D005542 3.1e-149 532.3 339 74.6
Carub.0003s2106 Capsella rubella HOM05D004356 ORTHO05D005542 4.1e-149 531.9 333 74.2
A03p42020 Brassica napus HOM05D004356 ORTHO05D005542 5.3e-149 531.6 387 68.0
HPP92_011797 Vanilla planifolia HOM05D004356 ORTHO05D005542 5.3e-149 531.6 337 73.9
Carub.0003s2101 Capsella rubella HOM05D004356 ORTHO05D005542 9.0e-149 530.8 377 68.7
AT3G21110 Arabidopsis thaliana HOM05D004356 ORTHO05D005542 5.9e-148 528.1 376 68.4
Cfa013712 Carpinus fangiana HOM05D004356 ORTHO05D005542 2.9e-147 525.8 405 68.4
Sabra17G0038400 Salix brachista HOM05D004356 ORTHO05D005542 1.2e-145 520.4 360 72.2
Sabra17G0043000 Salix brachista HOM05D004356 ORTHO05D005542 1.2e-145 520.4 360 72.2
Potri.017G051500 Populus trichocarpa HOM05D004356 ORTHO05D005542 2.1e-145 519.6 352 72.7
Sabra17G0037700 Salix brachista HOM05D004356 ORTHO05D005542 3.9e-144 515.4 360 71.4
BcaB04g20611 Brassica carinata HOM05D004356 ORTHO05D005542 6.7e-144 514.6 345 72.2
Mapoly0044s0034 Marchantia polymorpha HOM05D004356 ORTHO05D005542 8.8e-144 514.2 358 69.0
BcaC01g03528 Brassica carinata HOM05D004356 ORTHO05D004900 1.1e-143 513.8 317 75.1
Pp3c23_9790 Physcomitrium patens HOM05D004356 ORTHO05D005542 9.7e-143 510.8 334 71.9
AagrBONN_evm.TU.Sc2ySwM_344.5470 Anthoceros agrestis HOM05D004356 ORTHO05D005542 3.7e-142 508.8 331 71.0
Prupe.1G526100 Prunus persica HOM05D004356 ORTHO05D005542 1.4e-141 506.9 285 83.2
SEGI_03509 Sequoiadendron giganteum HOM05D004356 ORTHO05D005542 3.1e-141 505.8 396 63.9
arahy.Tifrunner.gnm1.ann1.3Z7WCZ Arachis hypogaea HOM05D004356 ORTHO05D005542 2.2e-139 499.6 395 66.3
C03p51440 Brassica napus HOM05D004356 ORTHO05D005542 2.9e-139 499.2 338 70.7
Carub.0043s0008 Capsella rubella HOM05D004356 ORTHO05D005542 2.9e-139 499.2 298 76.2
Sp3g19060 Schrenkiella parvula HOM05D004356 ORTHO05D005542 1.2e-137 493.8 333 70.9
C01p43120 Brassica napus HOM05D004356 ORTHO05D005542 1.4e-136 490.3 343 69.1
BolC1t04259H Brassica oleracea HOM05D004356 ORTHO05D005542 1.4e-136 490.3 343 69.1
arahy.Tifrunner.gnm1.ann1.1YQ32R Arachis hypogaea HOM05D004356 ORTHO05D005542 3.3e-135 485.7 325 72.3
SMO340G0097 Selaginella moellendorffii HOM05D004356 ORTHO05D005542 2.2e-134 483.0 328 69.2
CBR_g27760 Chara braunii HOM05D004356 ORTHO05D005542 5.5e-130 468.4 335 66.0
arahy.Tifrunner.gnm1.ann1.L8UQBM Arachis hypogaea HOM05D004356 ORTHO05D005542 4.7e-129 465.3 279 78.1
Carub.0043s0006 Capsella rubella HOM05D004356 ORTHO05D005542 1.8e-128 463.4 376 62.8
Sc23g0000510 Simmondsia chinensis HOM05D004356 ORTHO05D005542 5.9e-124 448.4 330 69.4
Carub.0043s0010 Capsella rubella HOM05D004356 ORTHO05D005542 1.5e-122 443.7 344 63.4
Lj4C732G13 Lonicera japonica HOM05D004356 ORTHO05D005542 6.1e-121 438.3 432 58.1
Cre03.g202113 Chlamydomonas reinhardtii HOM05D004356 ORTHO05D005542 1.1e-117 427.6 339 59.0
SHI20358 Sapria himalayana HOM05D004356 ORTHO05D005542 2.1e-113 413.3 344 61.3
Cpa.g.sc198.38 Carica papaya HOM05D004356 ORTHO05D005542 5.4e-109 398.7 261 73.9
MCO12G379 Micromonas commoda HOM05D004356 ORTHO05D005542 2.0e-108 396.7 317 59.9
Gohir.A05G222001 Gossypium hirsutum HOM05D004356 ORTHO05D005542 9.5e-106 387.9 316 64.6
PRCOL_00002575 Prasinoderma coloniale HOM05D004356 ORTHO05D005542 1.5e-103 380.6 326 57.4
CiPaw.16G030800 Carya illinoinensis HOM05D004356 ORTHO05D005542 6.6e-91 338.6 331 56.8
Nn1g08498 Nelumbo nucifera HOM05D004356 ORTHO05D005542 4.7e-89 332.4 247 70.9
Actinidia29604 Actinidia chinensis HOM05D004356 ORTHO05D005542 6.4e-86 322.0 187 80.7
ClCG00G002050 Citrullus lanatus HOM05D004356 ORTHO05D005542 1.0e-83 314.7 246 66.3
arahy.Tifrunner.gnm1.ann1.PGQR8U Arachis hypogaea HOM05D004356 ORTHO05D005542 1.2e-81 307.8 300 56.3
RcHm_v2.0_Chr3g0491851 Rosa chinensis HOM05D004356 ORTHO05D005542 4.0e-72 276.2 275 54.5
Nn1g08495 Nelumbo nucifera HOM05D004356 ORTHO05D005542 1.7e-70 270.8 157 80.9
ClCG08G011430 Citrullus lanatus HOM05D004356 ORTHO05D005542 2.1e-68 263.8 405 41.0
Carub.0516s0001 Capsella rubella HOM05D004356 ORTHO05D005542 7.6e-63 245.4 145 74.5
DCAR_012871 Daucus carota HOM05D004356 ORTHO05D005542 1.6e-60 237.7 312 45.8
arahy.Tifrunner.gnm1.ann1.X0GHYT Arachis hypogaea HOM05D004356 ORTHO05D005542 6.4e-54 215.7 235 51.9
arahy.Tifrunner.gnm1.ann1.HK5GW2 Arachis hypogaea HOM05D004356 ORTHO05D005542 8.7e-51 205.3 210 54.3
arahy.Tifrunner.gnm1.ann1.F88CCI Arachis hypogaea HOM05D004356 ORTHO05D005542 1.7e-46 191.0 274 43.4
Psat0s4321g0120 Pisum sativum HOM05D004356 ORTHO05D005542 5.1e-43 179.5 116 74.1
arahy.Tifrunner.gnm1.ann1.D1TUAT Arachis hypogaea HOM05D004356 ORTHO05D005542 1.1e-42 178.3 132 68.2
arahy.Tifrunner.gnm1.ann1.F3AJY4 Arachis hypogaea HOM05D004356 ORTHO05D005542 2.4e-40 170.6 171 57.3
arahy.Tifrunner.gnm1.ann1.6VP8YS Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-37 161.4 148 59.5
arahy.Tifrunner.gnm1.ann1.FASD2W Arachis hypogaea HOM05D004356 ORTHO05D005542 2.5e-37 160.6 171 56.1
arahy.Tifrunner.gnm1.ann1.MUPT6T Arachis hypogaea HOM05D004356 ORTHO05D005542 2.5e-37 160.6 171 56.1
EL10As8g23848 Beta vulgaris HOM05D004356 ORTHO05D090264 1.8e-32 144.4 226 38.9
arahy.Tifrunner.gnm1.ann1.H4UIY2 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-29 134.8 159 51.6
arahy.Tifrunner.gnm1.ann1.JXGW17 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-29 134.8 159 51.6
Cfa024383 Carpinus fangiana HOM05D004356 ORTHO05D124745 3.0e-19 100.5 168 35.7
Zm00001eb297900 Zea mays HOM05D004356 ORTHO05D005542 3.3e-18 97.1 49 83.7
Zm00001eb297960 Zea mays HOM05D004356 ORTHO05D444542 3.3e-18 97.1 49 83.7
arahy.Tifrunner.gnm1.ann1.8IDC4C Arachis hypogaea HOM05D004356 ORTHO05D005542 6.1e-12 76.3 51 72.5
SHI20361 Sapria himalayana HOM05D004356 ORTHO05D365714 4.1e-08 63.5 48 64.6
arahy.Tifrunner.gnm1.ann1.J07EWC Arachis hypogaea HOM05D004356 ORTHO05D005542 5.0e-06 56.6 38 71.1


User provided reference genes

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