Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 3.6e-290 1000.7 469 100.0
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.2e-272 942.6 463 95.2
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 9.7e-235 816.6 455 81.8
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 6.3e-234 813.9 448 83.3
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.7e-231 805.8 472 77.8
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 3.2e-230 801.6 464 79.5
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 5.5e-230 800.8 464 79.3
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 9.4e-230 800.0 455 81.1
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 1.2e-229 799.7 453 79.5
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.6e-229 799.3 455 80.0
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 2.1e-229 798.9 464 79.3
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 1.8e-228 795.8 454 80.6
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 4.0e-228 794.7 455 79.3
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 5.2e-228 794.3 442 81.2
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 5.2e-228 794.3 471 77.3
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.5e-227 792.7 455 80.2
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.5e-227 792.7 467 78.6
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.6e-227 792.0 453 79.7
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 3.4e-227 791.6 458 78.6
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 3.4e-227 791.6 445 80.9
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 4.4e-227 791.2 437 81.0
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 4.4e-227 791.2 453 79.5
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 7.5e-227 790.4 458 77.3
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.3e-226 789.6 451 80.0
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 1.7e-226 789.3 442 80.3
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.2e-226 788.9 453 79.5
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.8e-226 788.5 453 79.2
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 4.8e-226 787.7 439 82.0
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 6.3e-226 787.3 446 80.7
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.1e-225 786.6 458 77.9
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 3.1e-225 785.0 441 80.7
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 5.4e-225 784.3 456 78.9
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 7.0e-225 783.9 458 78.4
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 4.5e-224 781.2 443 80.6
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 4.5e-224 781.2 456 77.9
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 5.9e-224 780.8 443 80.8
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 5.9e-224 780.8 442 79.2
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 1.7e-223 779.2 441 80.0
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 2.9e-223 778.5 443 79.5
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.9e-223 778.5 457 77.0
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 2.9e-223 778.5 454 79.5
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 6.6e-223 777.3 443 79.7
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 6.6e-223 777.3 475 76.6
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.1e-222 776.5 440 79.8
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.1e-222 776.5 437 80.5
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.5e-222 776.2 458 77.9
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.5e-222 775.4 441 80.5
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 3.3e-222 775.0 443 79.7
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 4.2e-222 774.6 454 78.2
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 4.2e-222 774.6 454 78.2
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 7.2e-222 773.9 440 80.0
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 9.5e-222 773.5 468 76.9
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.2e-221 773.1 458 76.6
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 1.6e-221 772.7 465 77.0
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.1e-221 772.3 486 74.7
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 4.7e-221 771.2 441 79.8
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 8.0e-221 770.4 445 79.8
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 3.0e-220 768.5 440 79.5
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 3.0e-220 768.5 445 78.7
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 4.0e-220 768.1 448 78.3
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 6.8e-220 767.3 440 79.3
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 6.8e-220 767.3 444 78.6
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.0e-219 765.8 442 78.7
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 2.6e-219 765.4 442 79.2
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 3.4e-219 765.0 459 76.5
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 5.7e-219 764.2 448 77.0
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 9.8e-219 763.5 479 73.5
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.7e-218 762.7 445 77.1
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.7e-218 762.7 445 77.8
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.2e-218 762.3 442 78.1
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.2e-218 762.3 442 78.1
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 2.2e-218 762.3 489 72.2
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 2.2e-218 762.3 489 72.2
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 2.8e-218 761.9 445 77.1
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.1e-217 758.4 450 77.6
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.6e-216 756.1 440 77.5
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 2.0e-216 755.7 443 76.5
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 3.5e-216 755.0 439 77.0
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.3e-215 753.1 447 75.4
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 6.6e-215 750.7 445 75.7
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 1.5e-214 749.6 447 75.8
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 5.6e-214 747.7 446 76.9
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.6e-213 745.0 450 76.2
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 3.6e-213 745.0 464 73.7
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 6.8e-212 740.7 441 76.9
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.2e-210 735.7 466 74.7
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 5.0e-207 724.5 454 73.3
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.1e-206 723.4 442 75.6
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 1.1e-206 723.4 448 72.3
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 1.6e-205 719.5 488 69.3
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 4.9e-202 708.0 384 84.1
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 4.1e-201 704.9 384 83.6
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 7.8e-200 700.7 458 71.2
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 5.6e-190 667.9 446 69.3
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 2.1e-189 666.0 410 75.1
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 8.4e-186 654.1 430 68.8
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 2.4e-185 652.5 444 67.6
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 8.7e-183 644.0 454 68.1
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.2e-176 623.6 451 65.4
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 4.0e-172 608.6 428 68.5
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 5.3e-172 608.2 455 63.5
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 3.0e-159 565.8 342 75.4
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.6e-157 560.1 448 60.0
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 3.8e-154 548.9 467 57.6
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 8.4e-154 547.7 389 67.1
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.1e-153 547.4 310 79.0
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 2.7e-152 542.7 317 76.3
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 1.1e-142 510.8 301 77.1
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 7.7e-131 471.5 271 77.9
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.5e-78 297.7 197 71.6
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 1.6e-72 277.7 163 75.5
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.7e-72 276.2 197 68.5
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.3e-66 257.3 140 82.9
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.9e-65 254.2 133 82.7
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 5.3e-63 246.1 386 41.5
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 5.8e-62 242.7 131 86.3
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.1e-60 238.4 132 82.6
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 1.9e-60 237.7 223 57.0
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 2.3e-58 230.7 240 47.9
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.4e-55 220.7 120 81.7
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 4.8e-48 196.4 124 71.8
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.1e-47 193.7 119 73.9
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 4.2e-44 183.3 258 45.7
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.8e-32 144.1 88 69.3
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.1e-23 115.5 72 66.7
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 2.6e-22 110.9 181 37.6
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 1.7e-21 108.2 61 77.0
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 2.9e-21 107.5 55 83.6
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 8.5e-21 105.9 105 52.4
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.9e-20 104.8 103 48.5
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 5.3e-15 86.7 76 53.9
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 5.2e-10 70.1 56 60.7
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 9.7e-09 65.9 43 67.4


User provided reference genes

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