Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 6.9e-54 214.2 146 100.0
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 1.2e-50 203.4 146 87.0
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 5.3e-30 134.8 104 69.2
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 9.1e-30 134.0 105 63.8
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 1.2e-29 133.7 104 64.4
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 2.0e-29 132.9 106 64.2
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 5.9e-29 131.3 106 65.1
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 5.9e-29 131.3 106 65.1
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 5.9e-29 131.3 106 65.1
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 5.0e-28 128.3 105 62.9
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 5.0e-28 128.3 104 62.5
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 8.5e-28 127.5 106 65.1
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 8.5e-28 127.5 105 64.8
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 1.1e-27 127.1 104 61.5
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 1.4e-27 126.7 104 60.6
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 1.9e-27 126.3 107 63.6
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 2.5e-27 125.9 104 62.5
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 2.5e-27 125.9 104 61.5
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 2.5e-27 125.9 104 64.4
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 5.5e-27 124.8 108 62.0
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 7.2e-27 124.4 104 62.5
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 7.2e-27 124.4 105 59.0
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 7.2e-27 124.4 104 62.5
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 7.2e-27 124.4 104 64.4
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 9.4e-27 124.0 109 56.0
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 1.6e-26 123.2 104 61.5
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 1.6e-26 123.2 112 58.9
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 2.1e-26 122.9 104 60.6
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 2.7e-26 122.5 109 59.6
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 2.7e-26 122.5 104 56.7
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 3.6e-26 122.1 109 55.0
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 3.6e-26 122.1 106 62.3
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 6.1e-26 121.3 105 62.9
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 1.0e-25 120.6 105 59.0
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 1.4e-25 120.2 107 60.7
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 1.4e-25 120.2 110 56.4
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 1.8e-25 119.8 107 59.8
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 1.8e-25 119.8 107 60.7
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 3.0e-25 119.0 104 61.5
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 3.0e-25 119.0 104 61.5
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 3.9e-25 118.6 105 63.8
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 3.9e-25 118.6 105 63.8
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 6.7e-25 117.9 105 61.0
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 6.7e-25 117.9 105 61.0
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 6.7e-25 117.9 107 59.8
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 6.7e-25 117.9 107 59.8
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 6.7e-25 117.9 104 55.8
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 1.1e-24 117.1 108 57.4
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 1.5e-24 116.7 104 60.6
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 1.5e-24 116.7 105 59.0
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 1.5e-24 116.7 109 55.0
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 2.0e-24 116.3 104 55.8
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 2.0e-24 116.3 104 58.7
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 2.0e-24 116.3 104 57.7
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 2.0e-24 116.3 106 59.4
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 2.6e-24 115.9 104 57.7
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 4.4e-24 115.2 105 57.1
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 4.4e-24 115.2 105 57.1
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 5.7e-24 114.8 105 56.2
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 7.4e-24 114.4 107 58.9
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 7.4e-24 114.4 105 56.2
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 7.4e-24 114.4 105 56.2
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 7.4e-24 114.4 105 56.2
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 9.7e-24 114.0 104 58.7
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 1.3e-23 113.6 109 55.0
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 1.3e-23 113.6 106 55.7
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 1.3e-23 113.6 105 56.2
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 1.7e-23 113.2 105 53.3
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 1.7e-23 113.2 104 53.8
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 1.7e-23 113.2 110 51.8
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 2.2e-23 112.8 105 55.2
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 2.8e-23 112.5 104 57.7
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 3.7e-23 112.1 105 56.2
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 6.3e-23 111.3 107 52.3
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 8.2e-23 110.9 93 62.4
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 8.2e-23 110.9 108 55.6
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 1.1e-22 110.5 104 55.8
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 1.8e-22 109.8 106 57.5
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 1.8e-22 109.8 105 58.1
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 2.4e-22 109.4 105 55.2
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 3.1e-22 109.0 105 55.2
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 2.6e-21 105.9 101 57.4
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 3.4e-21 105.5 110 52.7
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 5.9e-21 104.8 121 51.2
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 1.7e-20 103.2 120 50.8
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 1.7e-20 103.2 120 50.0
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 1.7e-20 103.2 97 58.8
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 5.0e-20 101.7 105 55.2
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 2.5e-19 99.4 105 47.6
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 5.5e-19 98.2 93 57.0
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 9.4e-19 97.4 104 51.9
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 6.1e-18 94.7 106 51.9
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 6.1e-18 94.7 72 63.9
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 2.3e-17 92.8 108 50.0
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 3.1e-14 82.4 75 54.7
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 2.2e-12 76.3 108 38.0
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 1.1e-11 73.9 46 76.1
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 2.5e-11 72.8 109 39.4


User provided reference genes

Program Settings