Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 4.6e-55 217.6 108 100.0
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 4.6e-55 217.6 108 100.0
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.4e-43 178.7 108 81.5
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 1.2e-42 176.4 109 82.6
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.5e-42 176.0 109 83.5
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 3.4e-42 174.9 108 80.6
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.5e-42 174.5 108 80.6
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.5e-42 174.5 108 80.6
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 4.5e-42 174.5 108 80.6
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 5.8e-42 174.1 108 79.6
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 7.6e-42 173.7 108 79.6
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 7.6e-42 173.7 108 77.8
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.0e-41 173.3 108 82.4
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.3e-41 172.9 107 77.6
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.9e-41 171.8 108 76.9
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 4.9e-41 171.0 108 78.7
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.1e-40 169.9 108 76.9
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 1.9e-40 169.1 108 76.9
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 3.2e-40 168.3 108 76.9
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 9.3e-40 166.8 106 78.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 9.3e-40 166.8 110 75.5
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 9.3e-40 166.8 104 75.0
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.1e-39 165.6 106 77.4
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.1e-39 165.6 106 76.4
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 2.1e-39 165.6 104 80.8
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.1e-39 165.6 106 77.4
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 2.7e-39 165.2 106 77.4
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 4.6e-39 164.5 106 76.4
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 4.6e-39 164.5 104 77.9
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 6.0e-39 164.1 98 79.6
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 7.9e-39 163.7 108 76.9
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.0e-38 163.3 106 75.5
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 1.0e-38 163.3 99 78.8
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.3e-38 162.9 101 78.2
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 2.3e-38 162.2 106 75.5
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 3.0e-38 161.8 106 75.5
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 3.0e-38 161.8 99 77.8
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 3.9e-38 161.4 101 77.2
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 3.9e-38 161.4 101 77.2
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 3.9e-38 161.4 101 77.2
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 3.9e-38 161.4 108 75.0
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 3.9e-38 161.4 101 76.2
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 5.1e-38 161.0 108 71.3
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 5.1e-38 161.0 102 75.5
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 6.7e-38 160.6 106 74.5
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 8.7e-38 160.2 101 77.2
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 8.7e-38 160.2 103 74.8
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.1e-37 159.8 108 70.4
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.1e-37 159.8 108 70.4
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 1.1e-37 159.8 98 75.5
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 1.1e-37 159.8 92 81.5
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.1e-37 159.8 108 74.1
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.5e-37 159.5 106 74.5
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 2.5e-37 158.7 108 71.3
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 4.3e-37 157.9 104 72.1
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 4.3e-37 157.9 98 77.6
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 4.3e-37 157.9 98 72.4
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 5.7e-37 157.5 101 75.2
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 7.4e-37 157.1 98 77.6
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 7.4e-37 157.1 101 73.3
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 7.4e-37 157.1 104 71.2
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 7.4e-37 157.1 106 73.6
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 9.7e-37 156.8 108 69.4
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.3e-36 156.4 108 73.1
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.6e-36 156.0 108 73.1
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 1.6e-36 156.0 99 75.8
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 1.6e-36 156.0 99 75.8
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 3.7e-36 154.8 98 76.5
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.7e-36 154.8 106 68.9
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 6.3e-36 154.1 106 71.7
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 1.1e-35 153.3 101 68.3
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 2.4e-35 152.1 101 72.3
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 3.1e-35 151.8 92 79.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 4.1e-35 151.4 153 57.5
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.3e-35 151.0 92 79.3
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.3e-35 151.0 92 79.3
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 6.9e-35 150.6 101 72.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.2e-34 149.8 108 65.7
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.2e-34 149.8 92 77.2
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.5e-34 149.4 99 71.7
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 3.4e-34 148.3 92 78.3
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 1.3e-33 146.4 136 58.8
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.3e-33 146.4 92 75.0
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.7e-33 146.0 102 71.6
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 2.2e-33 145.6 99 74.7
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 2.9e-33 145.2 101 71.3
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 6.5e-33 144.1 94 75.5
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.9e-32 142.5 92 76.1
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 3.2e-32 141.7 92 76.1
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.6e-31 139.4 110 65.5
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.4e-30 136.3 87 74.7
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 3.9e-30 134.8 88 77.3
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 3.3e-29 131.7 90 67.8
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 4.3e-29 131.3 94 70.2
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 9.7e-29 130.2 102 66.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 2.2e-28 129.0 88 75.0
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.4e-27 126.3 88 73.9
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 3.1e-27 125.2 100 60.0
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 4.5e-26 121.3 87 70.1
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 3.8e-25 118.2 81 70.4
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 2.5e-24 115.5 89 60.7
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.2e-24 114.0 81 69.1
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 4.7e-23 111.3 77 71.4
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 3.9e-22 108.2 88 65.9
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.5e-21 106.3 92 56.5
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 4.4e-21 104.8 89 58.4
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.7e-20 102.8 80 62.5
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 2.2e-20 102.4 58 81.0
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.4e-19 99.8 56 85.7
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 3.1e-19 98.6 98 55.1
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.5e-18 96.3 55 80.0
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 3.4e-18 95.1 70 68.6
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.5e-13 79.7 58 69.0
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 1.4e-11 73.2 53 66.0
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.5e-10 68.6 53 64.2
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 7.7e-10 67.4 48 68.8


User provided reference genes

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