Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 4.9e-70 267.7 135 100.0
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 1.1e-45 186.8 95 95.8
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 2.1e-44 182.6 124 71.8
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 2.7e-44 182.2 127 71.7
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.9e-42 176.0 125 73.6
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 7.3e-42 174.1 111 75.7
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 2.8e-41 172.2 126 66.7
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 2.8e-41 172.2 118 69.5
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 3.6e-41 171.8 124 68.5
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 3.6e-41 171.8 120 69.2
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 4.7e-41 171.4 115 70.4
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 6.2e-41 171.0 127 66.9
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 6.2e-41 171.0 121 67.8
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 1.1e-40 170.2 151 58.3
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 1.4e-40 169.9 125 65.6
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.0e-40 168.3 128 64.1
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 4.0e-40 168.3 113 67.3
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 4.0e-40 168.3 130 64.6
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 5.2e-40 167.9 130 61.5
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 6.8e-40 167.5 115 69.6
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.5e-39 166.4 128 63.3
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 2.0e-39 166.0 125 63.2
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.6e-39 165.6 128 63.3
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.6e-39 165.6 128 63.3
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.6e-39 165.6 128 63.3
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.4e-39 165.2 128 63.3
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 4.4e-39 164.9 135 62.2
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 5.8e-39 164.5 125 68.0
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 7.6e-39 164.1 120 65.0
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.6e-39 164.1 128 62.5
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.6e-39 164.1 128 62.5
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 7.6e-39 164.1 122 63.1
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 9.9e-39 163.7 128 62.5
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 1.7e-38 162.9 126 61.9
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 2.2e-38 162.5 130 59.2
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 2.2e-38 162.5 112 71.4
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.2e-38 162.5 128 62.5
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 2.9e-38 162.2 109 67.0
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 2.9e-38 162.2 127 61.4
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 1.1e-37 160.2 142 56.3
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 1.1e-37 160.2 133 60.9
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 1.9e-37 159.5 124 59.7
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 2.4e-37 159.1 111 67.6
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 2.4e-37 159.1 119 63.9
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.2e-37 158.7 135 60.0
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 5.4e-37 157.9 126 58.7
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 1.2e-36 156.8 120 65.8
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 1.2e-36 156.8 117 66.7
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 1.6e-36 156.4 124 60.5
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 6.0e-36 154.5 113 62.8
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 7.8e-36 154.1 128 60.2
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 1.0e-35 153.7 110 67.3
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.0e-35 153.7 128 60.9
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.0e-35 153.7 128 60.2
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 1.0e-35 153.7 134 56.7
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.7e-35 152.9 128 60.2
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 5.1e-35 151.4 111 66.7
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 8.6e-35 150.6 134 55.2
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 1.2e-33 146.7 117 59.0
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 4.7e-33 144.8 132 57.6
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.7e-33 144.8 111 63.1
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 6.2e-33 144.4 128 57.8
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 1.1e-32 143.7 134 55.2
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 1.8e-32 142.9 116 58.6
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 1.8e-32 142.9 113 59.3
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 3.1e-32 142.1 128 56.2
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 6.9e-32 141.0 125 58.4
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 2.0e-31 139.4 127 54.3
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 2.6e-31 139.0 116 58.6
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 3.4e-31 138.7 122 53.3
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 1.3e-30 136.7 151 46.4
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 1.7e-30 136.3 130 53.8
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 3.8e-30 135.2 123 56.1
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 6.4e-30 134.4 120 56.7
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 2.7e-28 129.0 134 50.7
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 2.7e-28 129.0 134 50.7
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 1.0e-27 127.1 134 53.7
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 3.9e-27 125.2 128 54.7
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 3.9e-27 125.2 120 56.7
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 7.3e-26 120.9 132 50.0
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 9.6e-26 120.6 94 56.4
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 9.6e-26 120.6 122 50.0
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 1.3e-25 120.2 71 73.2
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 4.8e-25 118.2 130 53.8
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 6.2e-25 117.9 109 57.8
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 8.1e-25 117.5 84 61.9
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 1.4e-24 116.7 109 53.2
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 1.2e-23 113.6 208 33.7
Potri.001G402700 Populus trichocarpa HOM05D005439 ORTHO05D006793 2.2e-22 109.4 97 55.7
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 2.9e-22 109.0 118 53.4
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 4.9e-22 108.2 124 45.2
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 6.4e-22 107.8 84 59.5
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 8.4e-22 107.5 116 48.3
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 1.9e-21 106.3 118 49.2
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 2.4e-21 105.9 109 55.0
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 7.1e-21 104.4 121 47.9
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.2e-20 103.6 94 50.0
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 2.1e-20 102.8 118 46.6
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 3.5e-20 102.1 115 48.7
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 4.6e-20 101.7 135 45.2
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 1.0e-19 100.5 127 44.9
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 1.3e-19 100.1 118 50.0
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 1.8e-19 99.8 122 47.5
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 2.3e-19 99.4 113 48.7
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 3.0e-19 99.0 118 48.3
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 5.1e-19 98.2 121 46.3
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 6.7e-19 97.8 118 44.9
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 8.7e-19 97.4 127 43.3
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 1.5e-18 96.7 111 45.9
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 1.9e-18 96.3 111 47.7
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 1.9e-18 96.3 129 45.0
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 3.3e-18 95.5 121 46.3
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 4.3e-18 95.1 121 45.5
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 9.6e-18 94.0 118 47.5
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 2.1e-17 92.8 121 46.3
RcHm_v2.0_Chr2g0143371 Rosa chinensis HOM05D005439 ORTHO05D006793 2.8e-17 92.4 87 59.8
TPR.G39010 Trifolium pratense HOM05D005439 ORTHO05D006793 4.8e-17 91.7 71 59.2
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 1.8e-16 89.7 111 45.9
CDE08G1297 Ceratophyllum demersum HOM05D005439 ORTHO05D006793 2.4e-16 89.4 73 56.2
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 5.3e-16 88.2 111 45.0
Gorai.004G187000 Gossypium raimondii HOM05D005439 ORTHO05D006793 7.6e-15 84.3 73 60.3
AagrBONN_evm.TU.Sc2ySwM_369.384 Anthoceros agrestis HOM05D005439 ORTHO05D006793 6.4e-14 81.3 108 42.6
Carub.0002s2680 Capsella rubella HOM05D005439 ORTHO05D006793 4.2e-13 78.6 60 56.7
VMungo1215G1396 Vigna mungo HOM05D005439 ORTHO05D006793 2.7e-12 75.9 103 44.7
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 1.8e-11 73.2 84 46.4
Pp3c23_5480 Physcomitrium patens HOM05D005439 ORTHO05D006793 6.7e-11 71.2 115 38.3
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 4.3e-10 68.6 87 44.8
AUR62029363 Chenopodium quinoa HOM05D005439 ORTHO05D006793 2.1e-09 66.2 49 59.2
RcHm_v2.0_Chr5g0034431 Rosa chinensis HOM05D005439 ORTHO05D006793 2.1e-09 66.2 59 57.6
QL08p019959 Quercus lobata HOM05D005439 ORTHO05D006793 5.3e-08 61.6 55 60.0
FAN09G1944 Fragaria x ananassa HOM05D005439 ORTHO05D006793 9.0e-08 60.8 54 57.4
SMO293G0007 Selaginella moellendorffii HOM05D005439 ORTHO05D006793 9.0e-08 60.8 45 64.4
FAN09G3549 Fragaria x ananassa HOM05D005439 ORTHO05D006793 1.2e-07 60.5 55 50.9
SGA_v2.0_scaffold4G02008 Striga asiatica HOM05D000346 ORTHO05D000326 1.5e-07 60.1 56 51.8
FAN02G1859 Fragaria x ananassa HOM05D005439 ORTHO05D006793 4.5e-07 58.5 54 55.6
CsaV3_2G034140 Cucumis sativus L. HOM05D003646 ORTHO05D004503 7.6e-07 57.8 44 70.5
BolC9t58901H Brassica oleracea HOM05D005439 ORTHO05D006793 6.5e-06 54.7 76 43.4
BcaC04g18875 Brassica carinata HOM05D005439 ORTHO05D006793 8.4e-06 54.3 76 43.4


User provided reference genes

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