Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 8.6e-90 333.6 162 100.0
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 4.8e-80 301.2 148 96.6
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 7.1e-68 260.8 150 81.3
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 1.3e-61 240.0 152 77.0
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 2.5e-60 235.7 147 72.8
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 1.3e-58 229.9 156 69.9
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 2.3e-58 229.2 152 71.7
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 3.0e-58 228.8 152 69.7
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 6.7e-58 227.6 153 69.3
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 1.1e-57 226.9 148 74.3
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 1.5e-57 226.5 142 74.6
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 3.3e-57 225.3 153 69.9
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 5.7e-57 224.6 138 76.8
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 7.4e-57 224.2 158 67.1
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 9.6e-57 223.8 137 74.5
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.6e-56 223.0 140 72.9
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 1.6e-56 223.0 153 68.0
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 2.8e-56 222.2 153 67.3
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 6.3e-56 221.1 141 71.6
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 6.3e-56 221.1 151 70.9
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 8.2e-56 220.7 148 70.9
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 8.2e-56 220.7 156 66.0
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 8.2e-56 220.7 148 71.6
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.1e-55 220.3 138 72.5
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 1.4e-55 219.9 157 67.5
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 3.1e-55 218.8 153 68.6
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 4.1e-55 218.4 151 67.5
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 5.3e-55 218.0 151 70.2
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 5.3e-55 218.0 153 66.7
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 9.0e-55 217.2 135 77.8
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 1.2e-54 216.9 148 70.3
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 1.2e-54 216.9 148 70.3
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 1.5e-54 216.5 150 69.3
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 1.5e-54 216.5 157 65.6
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 2.0e-54 216.1 139 73.4
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 2.6e-54 215.7 156 66.7
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 3.4e-54 215.3 151 69.5
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 3.4e-54 215.3 147 70.1
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 5.9e-54 214.5 138 71.0
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 7.6e-54 214.2 153 66.7
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 7.6e-54 214.2 153 65.4
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 7.6e-54 214.2 145 67.6
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 1.0e-53 213.8 148 69.6
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 1.0e-53 213.8 148 69.6
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 1.0e-53 213.8 148 69.6
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 2.2e-53 212.6 138 69.6
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 2.9e-53 212.2 149 69.8
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 2.9e-53 212.2 151 67.5
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 2.9e-53 212.2 138 69.6
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 2.9e-53 212.2 138 72.5
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 6.5e-53 211.1 149 67.1
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 8.4e-53 210.7 151 66.9
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 1.9e-52 209.5 148 67.6
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 3.2e-52 208.8 144 68.8
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 9.3e-52 207.2 154 66.9
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 9.3e-52 207.2 151 65.6
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 1.6e-51 206.5 154 65.6
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 1.6e-51 206.5 156 62.8
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 1.6e-51 206.5 152 67.1
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 1.6e-51 206.5 138 68.1
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 2.7e-51 205.7 129 73.6
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 2.7e-51 205.7 139 71.2
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 2.7e-51 205.7 144 70.1
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 3.5e-51 205.3 141 73.8
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 4.6e-51 204.9 152 63.8
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 7.9e-51 204.1 154 66.9
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 2.3e-50 202.6 139 68.3
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 6.7e-50 201.1 137 69.3
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 1.5e-49 199.9 156 61.5
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 3.3e-49 198.7 140 67.9
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 4.3e-49 198.4 139 68.3
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 5.7e-49 198.0 139 69.1
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 5.7e-49 198.0 145 66.2
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 1.3e-48 196.8 155 63.2
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 1.6e-48 196.4 159 61.0
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 1.6e-48 196.4 139 67.6
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 2.2e-48 196.1 140 67.9
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 2.2e-48 196.1 140 69.3
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 3.7e-48 195.3 154 62.3
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 4.8e-48 194.9 136 70.6
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 1.4e-47 193.4 141 67.4
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 1.8e-47 193.0 151 63.6
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 4.1e-47 191.8 142 68.3
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 1.5e-46 189.9 135 66.7
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 1.0e-45 187.2 140 65.0
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 9.4e-44 180.6 148 58.8
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 1.2e-43 180.3 148 58.8
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.6e-43 179.9 138 61.6
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 3.6e-43 178.7 147 57.8
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 2.3e-42 176.0 141 59.6
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 1.3e-40 170.2 135 60.0
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 2.9e-37 159.1 134 56.0
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 2.5e-36 156.0 157 51.0
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 9.4e-36 154.1 105 70.5
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 2.1e-35 152.9 133 54.1
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 7.9e-35 151.0 133 54.9
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 7.9e-35 151.0 149 53.7
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 8.8e-34 147.5 152 53.3
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 9.7e-33 144.1 95 74.7
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 4.8e-32 141.7 106 65.1
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 7.0e-31 137.9 140 49.3
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 1.9e-28 129.8 95 65.3
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 1.9e-28 129.8 102 61.8
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 3.0e-26 122.5 143 49.0
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 6.7e-26 121.3 149 47.0
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 2.2e-21 106.3 135 43.0
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 8.5e-21 104.4 138 44.2
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 3.0e-18 95.9 74 58.1
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 5.7e-17 91.7 86 54.7
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 2.2e-16 89.7 154 37.0
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 5.4e-15 85.1 170 36.5
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 5.4e-15 85.1 103 46.6
COL.COLO4_02194 Corchorus olitorius HOM05D001568 ORTHO05D009161 1.2e-09 67.4 102 36.3
Cfa026913 Carpinus fangiana HOM05D001568 ORTHO05D009161 3.5e-06 55.8 183 26.8


User provided reference genes

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