Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4514 Papaver somniferum HOM05D010879 ORTHO05D010294 1.7e-144 516.2 290 100.0
PSO781G0306 Papaver somniferum HOM05D010879 ORTHO05D010294 8.1e-123 444.1 280 92.1
PSO339G0939 Papaver somniferum HOM05D010879 ORTHO05D010294 3.9e-117 425.2 273 90.8
PSO210G4529 Papaver somniferum HOM05D010879 ORTHO05D010294 5.1e-117 424.9 270 91.9
PSO223G0075 Papaver somniferum HOM05D010879 ORTHO05D010294 5.1e-117 424.9 270 91.9
PSO724G0648 Papaver somniferum HOM05D010879 ORTHO05D010294 5.1e-117 424.9 270 91.9
PSO761G0148 Papaver somniferum HOM05D010879 ORTHO05D010294 5.1e-117 424.9 270 91.9
PSO832G0405 Papaver somniferum HOM05D010879 ORTHO05D010294 5.1e-117 424.9 270 91.9
PSO675G8923 Papaver somniferum HOM05D010879 ORTHO05D010294 1.5e-113 413.3 270 90.4
PSO832G1619 Papaver somniferum HOM05D010879 ORTHO05D010294 3.9e-109 398.7 283 82.7
PSO063G2271 Papaver somniferum HOM05D010879 ORTHO05D010294 1.6e-102 376.7 270 84.1
PSO423G0281 Papaver somniferum HOM05D010879 ORTHO05D010294 2.3e-101 372.9 270 84.1
PSO675G7919 Papaver somniferum HOM05D010879 ORTHO05D010294 6.3e-91 338.2 227 84.6
PSO339G6517 Papaver somniferum HOM05D010879 ORTHO05D010294 7.9e-86 321.2 203 85.7
PSO017G7209 Papaver somniferum HOM05D010879 ORTHO05D010294 1.8e-85 320.1 171 99.4
PSO384G2643 Papaver somniferum HOM05D010879 ORTHO05D010294 2.3e-85 319.7 169 100.0
PSO782G4622 Papaver somniferum HOM05D010879 ORTHO05D010294 6.3e-59 231.9 530 40.0
PSO210G5528 Papaver somniferum HOM05D010879 ORTHO05D010294 1.2e-57 227.6 170 70.6
PSO528G0157 Papaver somniferum HOM05D010879 ORTHO05D010294 3.3e-47 193.0 169 61.5
HanXRQChr03g0077561 Helianthus annuus HOM05D008452 ORTHO05D010294 1.4e-10 71.2 95 38.9
Lsat_1_v5_gn_5_25601 Lactuca sativa HOM05D008452 ORTHO05D010294 1.4e-10 71.2 84 40.5
Lsat_1_v5_gn_8_116720 Lactuca sativa HOM05D008452 ORTHO05D010294 1.4e-10 71.2 76 43.4
Lsat_1_v5_gn_8_10480 Lactuca sativa HOM05D008452 ORTHO05D010294 5.4e-10 69.3 160 31.9
Lsat_1_v5_gn_1_8180 Lactuca sativa HOM05D008452 ORTHO05D010294 7.1e-10 68.9 128 32.8
HanXRQChr04g0119771 Helianthus annuus HOM05D008452 ORTHO05D010294 1.6e-09 67.8 161 28.6
HanXRQChr01g0011531 Helianthus annuus HOM05D008452 ORTHO05D010294 3.5e-09 66.6 151 29.8
HanXRQChr05g0158771 Helianthus annuus HOM05D008452 ORTHO05D010294 6.0e-09 65.9 151 30.5
HanXRQChr10g0300491 Helianthus annuus HOM05D008452 ORTHO05D010294 1.0e-08 65.1 68 42.6
HanXRQChr11g0349201 Helianthus annuus HOM05D008452 ORTHO05D010294 1.0e-08 65.1 151 31.1
HanXRQChr17g0547341 Helianthus annuus HOM05D008452 ORTHO05D010294 1.0e-08 65.1 151 31.1
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-08 64.7 80 43.8
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 1.8e-08 64.3 86 37.2
FvH4_1g20121 Fragaria vesca HOM05D000539 ORTHO05D000233 3.9e-08 63.2 103 35.9
Lsat_1_v5_gn_9_54600 Lactuca sativa HOM05D008452 ORTHO05D010294 3.9e-08 63.2 132 34.1
PSO832G0348 Papaver somniferum HOM05D010375 ORTHO05D015177 3.9e-08 63.2 86 36.0
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 5.1e-08 62.8 112 39.3
HanXRQChr13g0403321 Helianthus annuus HOM05D008452 ORTHO05D010294 6.7e-08 62.4 223 25.1
Lsat_1_v5_gn_3_12080 Lactuca sativa HOM05D008452 ORTHO05D010294 1.5e-07 61.2 132 31.1
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 1.5e-07 61.2 86 36.0
Lsat_1_v5_gn_3_84721 Lactuca sativa HOM05D008452 ORTHO05D010294 1.9e-07 60.8 191 27.2
FAN17G2822 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.5e-07 60.5 95 37.9
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-07 60.5 82 40.2
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 3.3e-07 60.1 77 40.3
RcHm_v2.0_Chr4g0395771 Rosa chinensis HOM05D000539 ORTHO05D000592 3.3e-07 60.1 80 38.8
HanXRQChr13g0402781 Helianthus annuus HOM05D008452 ORTHO05D010294 4.3e-07 59.7 124 30.6
RcHm_v2.0_Chr7g0211271 Rosa chinensis HOM05D000539 ORTHO05D000233 5.6e-07 59.3 117 32.5
HanXRQChr09g0243031 Helianthus annuus HOM05D008452 ORTHO05D010294 7.4e-07 58.9 124 31.5
HanXRQChr09g0253301 Helianthus annuus HOM05D008452 ORTHO05D010294 7.4e-07 58.9 124 31.5
PSO349G0233 Papaver somniferum HOM05D010375 ORTHO05D015177 7.4e-07 58.9 61 42.6
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 7.4e-07 58.9 80 38.8
PSO541G4711 Papaver somniferum HOM05D010375 ORTHO05D015177 7.4e-07 58.9 61 42.6
PSO724G0748 Papaver somniferum HOM05D010375 ORTHO05D015177 7.4e-07 58.9 61 42.6
PSO724G1336 Papaver somniferum HOM05D010375 ORTHO05D015177 7.4e-07 58.9 61 42.6
RcHm_v2.0_Chr2g0160781 Rosa chinensis HOM05D000539 ORTHO05D010294 7.4e-07 58.9 80 40.0
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 7.4e-07 58.9 80 40.0
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 7.4e-07 58.9 80 40.0
FAN28G2002 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.6e-07 58.5 83 38.6
PSO210G3644 Papaver somniferum HOM05D008452 ORTHO05D010294 9.6e-07 58.5 96 51.0
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.6e-07 58.5 78 38.5
FAN22G0636 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 58.2 82 39.0
FAN23G1229 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 58.2 82 39.0
FAN26G3431 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 58.2 88 37.5
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.3e-06 58.2 95 37.9
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.3e-06 58.2 78 38.5
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 1.3e-06 58.2 108 30.6
FAN08G3376 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.1e-06 57.4 83 38.6
FAN19G0052 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.1e-06 57.4 82 37.8
RcHm_v2.0_Chr2g0114971 Rosa chinensis HOM05D000539 ORTHO05D000592 2.1e-06 57.4 80 40.0
Lsat_1_v5_gn_9_89720 Lactuca sativa HOM05D008452 ORTHO05D010294 2.8e-06 57.0 119 31.1
RcHm_v2.0_Chr1g0316591 Rosa chinensis HOM05D000539 ORTHO05D000592 2.8e-06 57.0 86 40.7
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 2.8e-06 57.0 93 34.4
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 3.7e-06 56.6 133 33.1
FAN13G0463 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-06 56.6 88 37.5
FAN20G0711 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-06 56.6 88 37.5
FAN23G1544 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-06 56.6 88 37.5
FAN23G2427 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-06 56.6 88 37.5
FAN26G0996 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-06 56.6 88 37.5
FAN26G3280 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-06 56.6 88 37.5
FAN27G0332 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-06 56.6 88 37.5
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 6.2e-06 55.8 82 39.0
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 6.2e-06 55.8 93 33.3
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 6.2e-06 55.8 79 39.2
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 8.1e-06 55.5 78 38.5
FAN19G0444 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.1e-06 55.5 81 38.3
RcHm_v2.0_Chr2g0095181 Rosa chinensis HOM05D000539 ORTHO05D000233 8.1e-06 55.5 115 32.2
RcHm_v2.0_Chr2g0140381 Rosa chinensis HOM05D000539 ORTHO05D000592 8.1e-06 55.5 106 34.9
RcHm_v2.0_Chr3g0495531 Rosa chinensis HOM05D000539 ORTHO05D000592 8.1e-06 55.5 85 36.5


User provided reference genes

Program Settings