Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 4.9e-282 973.8 477 100.0
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 5.6e-270 933.7 443 98.4
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 4.0e-244 847.8 456 85.1
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.3e-239 832.8 455 84.2
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.6e-237 825.9 455 82.4
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 2.8e-237 825.1 456 82.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 8.1e-237 823.5 457 83.2
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 1.1e-236 823.2 456 82.2
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.8e-236 822.4 455 82.6
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.8e-236 822.4 453 83.2
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.8e-236 822.4 453 83.2
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 6.9e-236 820.5 455 82.6
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.6e-235 818.5 455 82.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 3.4e-235 818.1 453 82.6
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 3.4e-235 818.1 455 82.2
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 5.8e-235 817.4 455 82.9
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 7.6e-235 817.0 455 82.0
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.3e-234 816.2 455 82.4
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.2e-234 815.5 455 82.4
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 4.9e-234 814.3 471 79.8
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.4e-234 813.9 455 81.8
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 8.4e-234 813.5 455 82.2
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.4e-233 812.8 453 82.6
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 4.2e-233 811.2 456 80.9
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 4.2e-233 811.2 453 80.8
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 7.1e-233 810.4 455 82.0
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 9.3e-233 810.1 455 81.5
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.6e-232 809.3 455 81.3
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.7e-232 808.5 455 80.4
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.7e-232 808.5 455 82.0
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 7.9e-232 807.0 455 80.9
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 7.9e-232 807.0 455 80.2
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 7.9e-232 807.0 455 80.2
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-231 806.6 455 81.1
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.3e-231 806.2 455 80.2
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.3e-231 806.2 455 81.1
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 5.1e-231 804.3 456 81.1
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-230 803.1 455 80.0
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.1e-230 803.1 455 80.0
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.9e-230 802.4 455 81.1
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.9e-230 802.4 455 79.6
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 2.5e-230 802.0 449 81.5
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.1e-229 798.9 455 79.6
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.6e-229 798.1 456 80.7
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 8.1e-229 797.0 453 81.2
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.1e-228 796.6 455 80.2
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.8e-228 795.8 455 80.2
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 3.1e-228 795.0 476 77.7
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 3.1e-228 795.0 458 78.2
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 6.9e-228 793.9 460 78.3
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 9.0e-228 793.5 453 78.1
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 2.0e-227 792.3 455 79.1
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 3.4e-227 791.6 453 78.1
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 3.4e-227 791.6 456 79.2
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 7.6e-227 790.4 453 78.4
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.2e-226 788.9 455 78.9
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 2.9e-226 788.5 456 78.7
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.4e-225 785.4 455 78.2
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 6.0e-224 780.8 455 79.6
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.8e-223 779.2 452 78.1
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.8e-223 779.2 453 77.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.0e-223 778.5 455 78.0
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 2.5e-222 775.4 455 77.8
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 7.4e-222 773.9 455 77.8
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 7.4e-222 773.9 455 77.8
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 2.4e-220 768.8 455 77.4
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 5.3e-220 767.7 455 76.9
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.0e-219 765.8 480 74.0
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 2.0e-219 765.8 447 78.7
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 2.9e-218 761.9 453 75.7
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 1.6e-216 756.1 460 74.6
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.6e-216 756.1 455 75.6
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 3.5e-216 755.0 455 77.4
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 3.5e-216 755.0 453 75.3
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 4.6e-216 754.6 456 77.6
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 7.9e-216 753.8 455 75.6
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.3e-215 752.3 455 76.7
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 2.5e-214 748.8 449 75.7
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 4.8e-213 744.6 459 73.0
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.1e-212 743.4 493 71.4
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.2e-210 735.7 455 76.0
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 7.4e-206 720.7 455 72.5
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.7e-194 682.9 495 65.1
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 5.1e-191 671.4 394 78.4
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.7e-189 665.2 453 68.4
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.0e-187 659.4 461 65.9
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.9e-187 657.9 452 65.9
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.3e-186 656.8 452 65.7
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 2.6e-182 642.5 456 67.3
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.5e-177 625.9 454 62.8
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.2e-173 612.8 338 83.1
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.4e-172 610.1 341 82.1
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.4e-172 609.4 342 83.3
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.4e-172 609.4 342 83.3
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 7.0e-172 607.8 460 59.6
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-171 607.1 339 81.7
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.0e-170 604.0 321 86.3
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.8e-170 602.1 338 82.2
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.9e-169 599.7 339 81.1
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 7.2e-169 597.8 337 80.1
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.8e-165 585.9 338 79.9
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 4.9e-165 585.1 451 58.1
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 9.5e-161 570.9 337 78.0
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-160 570.1 299 86.3
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 8.6e-146 521.2 303 79.2
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.6e-144 515.8 291 79.4
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.1e-143 514.2 337 72.1
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 7.5e-142 508.1 300 78.7
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.9e-140 503.4 277 81.9
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 6.2e-136 488.4 338 64.5
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-128 463.8 286 75.5
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.1e-127 459.5 280 75.0
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 7.9e-107 391.7 450 42.2
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.2e-91 341.3 484 36.4
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.3e-64 251.5 164 68.3
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.4e-55 220.7 110 90.0
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.4e-55 220.7 110 90.0
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.4e-55 219.5 110 89.1
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.5e-52 210.7 185 57.3
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 8.3e-40 169.1 99 78.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 2.5e-12 77.8 40 85.0


User provided reference genes

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