Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3866 Papaver somniferum HOM05D026995 ORTHO05D005585 6.7e-258 894.0 650 100.0
PSO541G4161 Papaver somniferum HOM05D026995 ORTHO05D005585 1.6e-139 500.7 610 65.6
PSO541G3520 Papaver somniferum HOM05D005129 ORTHO05D005585 1.5e-68 265.0 663 47.1
PSO541G0381 Papaver somniferum HOM05D026995 ORTHO05D005585 1.9e-50 204.9 459 52.9
PSO541G6300 Papaver somniferum HOM05D005129 ORTHO05D005585 8.4e-43 179.5 628 38.1
PSO675G2011 Papaver somniferum HOM05D026995 ORTHO05D005585 5.6e-39 166.8 110 79.1
PSO675G1291 Papaver somniferum HOM05D005129 ORTHO05D005585 5.6e-23 113.6 120 59.2
Aqoxy1G02020_Aqoxy1G02021 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 3.1e-21 107.8 639 40.5
Lj1C1160T1 Lonicera japonica HOM05D005129 ORTHO05D005585 3.4e-20 104.4 479 27.3
TAR626G1389 Trochodendron aralioides HOM05D005129 ORTHO05D005585 3.9e-16 90.9 157 49.0
Nn1g08322 Nelumbo nucifera HOM05D005129 ORTHO05D005585 6.7e-16 90.1 155 47.7
Potri.001G463700 Populus trichocarpa HOM05D005129 ORTHO05D005585 8.7e-16 89.7 264 34.5
CDE06G2236 Ceratophyllum demersum HOM05D005129 ORTHO05D005585 1.4e-13 82.4 147 46.9
Aqoxy7G00168 Aquilegia oxysepala HOM05D019791 ORTHO05D021351 4.1e-13 80.9 103 46.6
MELO3C002837.2 Cucumis melo HOM05D005129 ORTHO05D005585 6.9e-13 80.1 148 41.2
MBI18_g10016_MAGBIO Magnolia biondii HOM05D005129 ORTHO05D005585 9.0e-13 79.7 79 57.0
QL05p063822 Quercus lobata HOM05D005129 ORTHO05D005585 9.0e-13 79.7 150 42.7
Eucgr.D00092 Eucalyptus grandis HOM05D005129 ORTHO05D005585 1.3e-11 75.9 113 45.1
Potri.011G161901 Populus trichocarpa HOM05D005129 ORTHO05D005585 1.7e-11 75.5 278 33.5
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 3.8e-11 74.3 148 39.9
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 8.4e-11 73.2 112 43.8
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 3.2e-10 71.2 110 43.6
TWI63G1468 Tripterygium wilfordii HOM05D005129 ORTHO05D005585 3.2e-10 71.2 152 47.4
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 4.2e-10 70.9 169 33.1
GSVIVG01035592001 Vitis vinifera HOM05D005129 ORTHO05D005585 5.5e-10 70.5 70 51.4
Atru.chr3.3028 Acer truncatum HOM05D005129 ORTHO05D005585 2.7e-09 68.2 133 39.8
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 2.7e-09 68.2 117 42.7
Dinv27169 Davidia involucrata HOM05D005129 ORTHO05D005585 3.5e-09 67.8 150 34.0
TAR633G2434 Trochodendron aralioides HOM05D005129 ORTHO05D005585 4.6e-09 67.4 388 26.5
arahy.Tifrunner.gnm1.ann1.LUZ6WJ Arachis hypogaea HOM05D005129 ORTHO05D005585 6.1e-09 67.0 118 36.4
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 6.1e-09 67.0 129 38.8
RcHm_v2.0_Chr5g0017511 Rosa chinensis HOM05D005129 ORTHO05D005585 7.9e-09 66.6 259 37.5
Thecc.06G015200 Theobroma cacao HOM05D005129 ORTHO05D005585 7.9e-09 66.6 107 39.3
Gorai.009G117400 Gossypium raimondii HOM05D005129 ORTHO05D005585 1.0e-08 66.2 135 37.8
Rhsim13G0123000 Rhododendron simsii HOM05D005129 ORTHO05D005585 1.0e-08 66.2 110 40.0
Nitab4.5_0000076g0130 Nicotiana tabacum HOM05D005129 ORTHO05D005585 1.8e-08 65.5 82 48.8
Ciclev10014031m.g Citrus clementina HOM05D005129 ORTHO05D005585 5.1e-08 63.9 74 47.3
Gohir.D05G113400 Gossypium hirsutum HOM05D005129 ORTHO05D005585 5.1e-08 63.9 107 39.3
FAN21G1521 Fragaria x ananassa HOM05D005129 ORTHO05D005585 6.7e-08 63.5 134 35.1
MD10G1247500 Malus domestica HOM05D005129 ORTHO05D005585 6.7e-08 63.5 213 31.0
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 6.7e-08 63.5 144 36.1
Psat1g165880 Pisum sativum HOM05D005129 ORTHO05D005585 1.9e-07 62.0 86 44.2
Sc19g0000270 Simmondsia chinensis HOM05D005129 ORTHO05D005585 1.9e-07 62.0 86 43.0
FAN11G1468 Fragaria x ananassa HOM05D005129 ORTHO05D005585 2.5e-07 61.6 102 41.2
Gohir.A05G112850 Gossypium hirsutum HOM05D005129 ORTHO05D005585 2.5e-07 61.6 107 39.3
CANSAT35G1118 Cannabis sativa HOM05D005129 ORTHO05D005585 4.3e-07 60.8 111 44.1
CAN.G39.32 Capsicum annuum HOM05D005129 ORTHO05D000007 4.3e-07 60.8 117 36.8
Cpa.g.sc166.48 Carica papaya HOM05D005129 ORTHO05D005585 4.3e-07 60.8 70 45.7
Lsat_1_v5_gn_3_43520 Lactuca sativa HOM05D005129 ORTHO05D005585 9.7e-07 59.7 229 31.4
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 1.3e-06 59.3 83 44.6
arahy.Tifrunner.gnm1.ann1.40GDTE Arachis hypogaea HOM05D005129 ORTHO05D005585 2.2e-06 58.5 272 33.8
SalBow8G1057 Salvia bowleyana HOM05D005129 ORTHO05D005585 2.2e-06 58.5 76 44.7
Nitab4.5_0002094g0030 Nicotiana tabacum HOM05D005129 ORTHO05D005585 2.8e-06 58.2 106 34.0
Sopen02g006450 Solanum pennellii HOM05D005129 ORTHO05D005585 2.8e-06 58.2 123 35.0
MD05G1268800 Malus domestica HOM05D005129 ORTHO05D005585 3.7e-06 57.8 213 29.6
PGR083G2529 Punica granatum HOM05D005129 ORTHO05D005585 3.7e-06 57.8 119 39.5
EL10Ac3g05106 Beta vulgaris HOM05D005129 ORTHO05D005585 6.3e-06 57.0 149 33.6
FAN25G2195 Fragaria x ananassa HOM05D005129 ORTHO05D005585 8.2e-06 56.6 260 36.5
Peaxi162Scf01909g00118 Petunia axillaris HOM05D005129 ORTHO05D005585 8.2e-06 56.6 173 34.1


User provided reference genes

Program Settings